data_RJ6
#
_chem_comp.id RJ6
_chem_comp.name "N-(3,5-dimethoxyphenyl)imidodicarbonimidic diamide"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H15 N5 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "{[(3,5-dimethoxyanilino)(imino)methyl]amino}methanimidamide"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2008-06-17
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 237.258
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code RJ6
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3DG8
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RJ6 C1 C1 C 0 1 Y N N 26.986 4.903 62.198 2.475 0.968 -0.232 C1 RJ6 1
RJ6 C2 C2 C 0 1 Y N N 27.513 5.950 62.836 2.516 -0.398 0.007 C2 RJ6 2
RJ6 C3 C3 C 0 1 Y N N 28.356 6.847 62.332 1.380 -1.059 0.451 C3 RJ6 3
RJ6 C4 C4 C 0 1 Y N N 28.737 6.673 60.984 0.204 -0.354 0.657 C4 RJ6 4
RJ6 C5 C5 C 0 1 Y N N 28.239 5.585 60.256 0.163 1.013 0.418 C5 RJ6 5
RJ6 C6 C6 C 0 1 Y N N 27.357 4.712 60.875 1.301 1.674 -0.022 C6 RJ6 6
RJ6 O7 O7 O 0 1 N N N 26.121 4.166 62.946 3.589 1.614 -0.668 O7 RJ6 7
RJ6 C8 C8 C 0 1 N N N 25.342 3.039 62.695 4.765 0.825 -0.857 C8 RJ6 8
RJ6 O9 O9 O 0 1 N N N 28.656 7.815 63.250 1.420 -2.397 0.683 O9 RJ6 9
RJ6 C10 C10 C 0 1 N N N 28.502 9.174 62.957 2.665 -3.059 0.450 C10 RJ6 10
RJ6 N11 N11 N 0 1 N N N 28.577 5.354 58.955 -1.024 1.724 0.625 N11 RJ6 11
RJ6 C12 C12 C 0 1 N N N 29.527 4.532 58.421 -2.236 1.139 0.338 C12 RJ6 12
RJ6 N13 N13 N 0 1 N N N 29.812 4.670 57.107 -2.277 -0.100 -0.269 N13 RJ6 13
RJ6 C14 C14 C 0 1 N N N 29.217 5.381 56.132 -3.492 -0.689 -0.551 C14 RJ6 14
RJ6 N15 N15 N 0 1 N N N 28.389 6.412 56.396 -3.534 -1.956 -1.084 N15 RJ6 15
RJ6 N16 N16 N 0 1 N N N 30.124 3.663 59.168 -3.344 1.754 0.638 N16 RJ6 16
RJ6 N17 N17 N 0 1 N N N 29.448 5.058 54.906 -4.599 -0.046 -0.312 N17 RJ6 17
RJ6 H2 H2 H 0 1 N N N 27.225 6.083 63.868 3.432 -0.947 -0.154 H2 RJ6 18
RJ6 H4 H4 H 0 1 N N N 29.410 7.376 60.516 -0.681 -0.869 1.002 H4 RJ6 19
RJ6 H6 H6 H 0 1 N N N 26.955 3.876 60.322 1.270 2.738 -0.207 H6 RJ6 20
RJ6 H8 H8 H 0 1 N N N 25.137 2.967 61.617 5.578 1.463 -1.205 H8 RJ6 21
RJ6 H8A H8A H 0 1 N N N 25.882 2.139 63.026 5.047 0.360 0.087 H8A RJ6 22
RJ6 H8B H8B H 0 1 N N N 24.392 3.120 63.244 4.567 0.051 -1.599 H8B RJ6 23
RJ6 H10 H10 H 0 1 N N N 28.462 9.749 63.894 2.952 -2.935 -0.594 H10 RJ6 24
RJ6 H10A H10A H 0 0 N N N 29.354 9.517 62.352 3.432 -2.627 1.092 H10A RJ6 25
RJ6 H10B H10B H 0 0 N N N 27.569 9.324 62.394 2.559 -4.121 0.674 H10B RJ6 26
RJ6 HN11 HN11 H 0 0 N N N 28.043 5.870 58.285 -0.992 2.629 0.972 HN11 RJ6 27
RJ6 HN13 HN13 H 0 0 N N N 30.610 4.149 56.805 -1.452 -0.555 -0.498 HN13 RJ6 28
RJ6 HN15 HN15 H 0 0 N N N 28.299 6.551 57.382 -2.715 -2.463 -1.194 HN15 RJ6 29
RJ6 HN1A HN1A H 0 0 N N N 27.928 6.963 55.700 -4.383 -2.342 -1.350 HN1A RJ6 30
RJ6 HN16 HN16 H 0 0 N N N 29.770 3.726 60.101 -3.316 2.655 0.998 HN16 RJ6 31
RJ6 HN17 HN17 H 0 0 N N N 28.950 5.659 54.281 -5.453 -0.460 -0.511 HN17 RJ6 32
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RJ6 C6 C1 DOUB Y N 1
RJ6 C1 C2 SING Y N 2
RJ6 C1 O7 SING N N 3
RJ6 C3 C2 DOUB Y N 4
RJ6 C2 H2 SING N N 5
RJ6 C4 C3 SING Y N 6
RJ6 C3 O9 SING N N 7
RJ6 C5 C4 DOUB Y N 8
RJ6 C4 H4 SING N N 9
RJ6 N11 C5 SING N N 10
RJ6 C5 C6 SING Y N 11
RJ6 C6 H6 SING N N 12
RJ6 C8 O7 SING N N 13
RJ6 C8 H8 SING N N 14
RJ6 C8 H8A SING N N 15
RJ6 C8 H8B SING N N 16
RJ6 C10 O9 SING N N 17
RJ6 C10 H10 SING N N 18
RJ6 C10 H10A SING N N 19
RJ6 C10 H10B SING N N 20
RJ6 C12 N11 SING N N 21
RJ6 N11 HN11 SING N N 22
RJ6 N13 C12 SING N N 23
RJ6 C12 N16 DOUB N N 24
RJ6 C14 N13 SING N N 25
RJ6 N13 HN13 SING N N 26
RJ6 N17 C14 DOUB N N 27
RJ6 C14 N15 SING N N 28
RJ6 N15 HN15 SING N N 29
RJ6 N15 HN1A SING N N 30
RJ6 N16 HN16 SING N N 31
RJ6 N17 HN17 SING N N 32
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RJ6 SMILES ACDLabs 10.04 "O(c1cc(cc(OC)c1)NC(=[N@H])NC(=[N@H])N)C"
RJ6 SMILES_CANONICAL CACTVS 3.341 "COc1cc(NC(=N)NC(N)=N)cc(OC)c1"
RJ6 SMILES CACTVS 3.341 "COc1cc(NC(=N)NC(N)=N)cc(OC)c1"
RJ6 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[H]/N=C(\N)/N/C(=N/[H])/Nc1cc(cc(c1)OC)OC"
RJ6 SMILES "OpenEye OEToolkits" 1.5.0 "[H]N=C(N)NC(=N[H])Nc1cc(cc(c1)OC)OC"
RJ6 InChI InChI 1.03 "InChI=1S/C10H15N5O2/c1-16-7-3-6(4-8(5-7)17-2)14-10(13)15-9(11)12/h3-5H,1-2H3,(H6,11,12,13,14,15)"
RJ6 InChIKey InChI 1.03 VQKIGKHIRBCYNE-UHFFFAOYSA-N
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RJ6 "SYSTEMATIC NAME" ACDLabs 10.04 "N-(3,5-dimethoxyphenyl)imidodicarbonimidic diamide"
RJ6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "3-carbamimidoyl-1-(3,5-dimethoxyphenyl)guanidine"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RJ6 "Create component" 2008-06-17 RCSB
RJ6 "Modify aromatic_flag" 2011-06-04 RCSB
RJ6 "Modify descriptor" 2011-06-04 RCSB
RJ6 "Modify synonyms" 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id RJ6
_pdbx_chem_comp_synonyms.name "{[(3,5-dimethoxyanilino)(imino)methyl]amino}methanimidamide"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
##