data_RJA # _chem_comp.id RJA _chem_comp.name "Ratjadone A, bound form" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H44 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2012-10-11 _chem_comp.pdbx_modified_date 2013-01-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 476.645 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RJA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4HAU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RJA C1 C1 C 0 1 N N N -34.340 76.057 28.738 5.408 -4.659 -1.040 C1 RJA 1 RJA O1 O1 O 0 1 N N N -35.559 76.097 28.998 6.150 -5.518 -1.758 O1 RJA 2 RJA C2 C2 C 0 1 N N N -33.330 76.121 29.870 5.812 -3.210 -0.948 C2 RJA 3 RJA O2 O2 O 0 1 N N N -30.430 72.861 29.297 4.271 -0.724 2.225 O2 RJA 4 RJA C3 C3 C 0 1 N N N -32.131 75.204 29.648 4.806 -2.455 -0.078 C3 RJA 5 RJA O3 O3 O 0 1 N N N -43.689 72.367 28.516 -4.936 1.967 -0.808 O3 RJA 6 RJA C4 C4 C 0 1 N N N -32.640 73.827 29.219 5.215 -0.984 0.016 C4 RJA 7 RJA O4 O4 O 0 1 N N N -43.977 72.573 33.728 -7.046 -2.612 -0.568 O4 RJA 8 RJA C5 C5 C 0 1 N N R -31.575 73.044 28.465 4.209 -0.228 0.886 C5 RJA 9 RJA O5 O5 O 0 1 N N N -43.935 71.020 30.550 -3.504 -0.477 -0.317 O5 RJA 10 RJA C6 C6 C 0 1 N N N -32.054 71.693 27.983 4.542 1.242 0.879 C6 RJA 11 RJA C7 C7 C 0 1 N N N -33.327 71.323 27.933 3.653 2.122 0.430 C7 RJA 12 RJA C8 C8 C 0 1 N N N -33.671 69.979 27.430 3.978 3.556 0.423 C8 RJA 13 RJA C9 C9 C 0 1 N N N -34.930 69.550 27.438 3.133 4.426 -0.119 C9 RJA 14 RJA "O1'" "O1'" O 0 1 N N N -33.931 75.978 27.567 4.415 -5.047 -0.473 "O1'" RJA 15 RJA C10 C10 C 0 1 N N R -36.042 70.407 27.968 1.782 3.964 -0.602 C10 RJA 16 RJA C11 C11 C 0 1 N N N -37.036 70.718 26.859 0.690 4.818 0.044 C11 RJA 17 RJA C12 C12 C 0 1 N N N -38.028 71.704 27.409 -0.664 4.279 -0.342 C12 RJA 18 RJA C13 C13 C 0 1 N N N -39.211 71.264 27.826 -1.294 3.430 0.463 C13 RJA 19 RJA C14 C14 C 0 1 N N N -40.205 72.151 28.404 -2.615 2.903 0.087 C14 RJA 20 RJA C15 C15 C 0 1 N N N -41.394 71.636 28.658 -3.246 2.054 0.891 C15 RJA 21 RJA C16 C16 C 0 1 N N R -42.490 72.443 29.293 -4.599 1.515 0.506 C16 RJA 22 RJA C17 C17 C 0 1 N N R -42.712 71.723 30.611 -4.563 -0.015 0.525 C17 RJA 23 RJA C18 C18 C 0 1 N N N -42.670 72.686 31.770 -5.897 -0.563 0.013 C18 RJA 24 RJA C19 C19 C 0 1 N N R -42.886 71.945 33.073 -5.831 -2.093 -0.022 C19 RJA 25 RJA C20 C20 C 0 1 N N S -43.281 70.503 32.843 -4.651 -2.523 -0.899 C20 RJA 26 RJA C21 C21 C 0 1 N N S -44.352 70.420 31.767 -3.365 -1.899 -0.351 C21 RJA 27 RJA C22 C22 C 0 1 N N N -44.729 68.985 31.513 -3.110 -2.412 1.042 C22 RJA 28 RJA C23 C23 C 0 1 N N N -46.006 68.688 31.368 -2.007 -3.068 1.308 C23 RJA 29 RJA C24 C24 C 0 1 N N N -46.463 67.278 31.116 -1.753 -3.582 2.701 C24 RJA 30 RJA C25 C25 C 0 1 N N N -32.615 69.069 26.883 5.270 4.040 1.031 C25 RJA 31 RJA C26 C26 C 0 1 N N N -36.715 69.671 29.112 1.708 4.106 -2.124 C26 RJA 32 RJA C27 C27 C 0 1 N N N -37.675 73.153 27.490 -1.302 4.702 -1.639 C27 RJA 33 RJA C28 C28 C 0 1 N N N -42.081 69.627 32.536 -4.529 -4.048 -0.880 C28 RJA 34 RJA HO1 HO1 H 0 1 N N N -36.057 76.058 28.190 5.851 -6.437 -1.787 HO1 RJA 35 RJA H2 H2 H 0 1 N N N -32.968 77.156 29.960 6.804 -3.137 -0.503 H2 RJA 36 RJA H2A H2A H 0 1 N N N -33.830 75.825 30.804 5.828 -2.773 -1.947 H2A RJA 37 RJA HO2 HO2 H 0 1 N N N -29.768 72.372 28.822 5.138 -0.626 2.641 HO2 RJA 38 RJA H3 H3 H 0 1 N N N -31.486 75.622 28.861 3.813 -2.528 -0.523 H3 RJA 39 RJA H3A H3A H 0 1 N N N -31.557 75.112 30.582 4.789 -2.891 0.921 H3A RJA 40 RJA HO3 HO3 H 0 1 N N N -44.370 72.882 28.932 -4.312 1.688 -1.492 HO3 RJA 41 RJA H4 H4 H 0 1 N N N -32.932 73.260 30.115 6.208 -0.910 0.461 H4 RJA 42 RJA H4A H4A H 0 1 N N N -33.516 73.958 28.566 5.232 -0.547 -0.983 H4A RJA 43 RJA HO4 HO4 H 0 1 N N N -44.145 72.135 34.554 -7.837 -2.372 -0.066 HO4 RJA 44 RJA H5 H5 H 0 1 N N N -31.286 73.634 27.583 3.204 -0.375 0.491 H5 RJA 45 RJA H6 H6 H 0 1 N N N -31.310 70.981 27.658 5.503 1.579 1.238 H6 RJA 46 RJA H7 H7 H 0 1 N N N -34.104 71.999 28.257 2.692 1.784 0.071 H7 RJA 47 RJA H9 H9 H 0 1 N N N -35.156 68.566 27.056 3.414 5.465 -0.214 H9 RJA 48 RJA H10 H10 H 0 1 N N N -35.623 71.351 28.347 1.637 2.919 -0.327 H10 RJA 49 RJA H11 H11 H 0 1 N N N -36.512 71.154 25.996 0.798 4.787 1.128 H11 RJA 50 RJA H11A H11A H 0 0 N N N -37.553 69.798 26.548 0.782 5.848 -0.301 H11A RJA 51 RJA H13 H13 H 0 1 N N N -39.440 70.213 27.732 -0.837 3.126 1.393 H13 RJA 52 RJA H14 H14 H 0 1 N N N -39.982 73.186 28.617 -3.073 3.207 -0.844 H14 RJA 53 RJA H15 H15 H 0 1 N N N -41.584 70.604 28.402 -2.789 1.751 1.821 H15 RJA 54 RJA H16 H16 H 0 1 N N N -42.170 73.482 29.463 -5.347 1.869 1.215 H16 RJA 55 RJA H17 H17 H 0 1 N N N -41.890 71.004 30.741 -4.394 -0.362 1.544 H17 RJA 56 RJA H18 H18 H 0 1 N N N -41.689 73.184 31.793 -6.700 -0.248 0.678 H18 RJA 57 RJA H18A H18A H 0 0 N N N -43.461 73.440 31.645 -6.085 -0.184 -0.992 H18A RJA 58 RJA H19 H19 H 0 1 N N N -41.973 71.990 33.685 -5.694 -2.476 0.989 H19 RJA 59 RJA H20 H20 H 0 1 N N N -43.727 70.132 33.777 -4.814 -2.183 -1.921 H20 RJA 60 RJA H21 H21 H 0 1 N N N -45.244 70.944 32.140 -2.528 -2.166 -0.996 H21 RJA 61 RJA H22 H22 H 0 1 N N N -43.972 68.217 31.451 -3.837 -2.241 1.822 H22 RJA 62 RJA H23 H23 H 0 1 N N N -46.741 69.477 31.432 -1.281 -3.240 0.528 H23 RJA 63 RJA H24 H24 H 0 1 N N N -47.559 67.258 31.028 -0.793 -4.097 2.729 H24 RJA 64 RJA H24A H24A H 0 0 N N N -46.013 66.908 30.183 -1.737 -2.745 3.400 H24A RJA 65 RJA H24B H24B H 0 0 N N N -46.151 66.636 31.953 -2.546 -4.275 2.983 H24B RJA 66 RJA H25 H25 H 0 1 N N N -33.075 68.122 26.564 6.050 4.045 0.269 H25 RJA 67 RJA H25A H25A H 0 0 N N N -32.128 69.549 26.021 5.134 5.049 1.419 H25A RJA 68 RJA H25B H25B H 0 0 N N N -31.865 68.867 27.662 5.560 3.374 1.843 H25B RJA 69 RJA H26 H26 H 0 1 N N N -37.534 70.286 29.513 2.486 3.498 -2.584 H26 RJA 70 RJA H26A H26A H 0 0 N N N -37.119 68.716 28.746 0.731 3.772 -2.473 H26A RJA 71 RJA H26B H26B H 0 0 N N N -35.979 69.477 29.906 1.854 5.151 -2.398 H26B RJA 72 RJA H27 H27 H 0 1 N N N -38.520 73.714 27.916 -1.005 4.015 -2.432 H27 RJA 73 RJA H27A H27A H 0 0 N N N -36.791 73.280 28.132 -2.386 4.687 -1.533 H27A RJA 74 RJA H27B H27B H 0 0 N N N -37.454 73.533 26.482 -0.976 5.711 -1.892 H27B RJA 75 RJA H28 H28 H 0 1 N N N -42.414 68.591 32.376 -5.447 -4.491 -1.265 H28 RJA 76 RJA H28A H28A H 0 0 N N N -41.581 69.995 31.628 -3.688 -4.353 -1.504 H28A RJA 77 RJA H28B H28B H 0 0 N N N -41.377 69.660 33.381 -4.363 -4.387 0.143 H28B RJA 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RJA "O1'" C1 DOUB N N 1 RJA C1 O1 SING N N 2 RJA C1 C2 SING N N 3 RJA O1 HO1 SING N N 4 RJA C3 C2 SING N N 5 RJA C2 H2 SING N N 6 RJA C2 H2A SING N N 7 RJA C5 O2 SING N N 8 RJA O2 HO2 SING N N 9 RJA C4 C3 SING N N 10 RJA C3 H3 SING N N 11 RJA C3 H3A SING N N 12 RJA O3 C16 SING N N 13 RJA O3 HO3 SING N N 14 RJA C5 C4 SING N N 15 RJA C4 H4 SING N N 16 RJA C4 H4A SING N N 17 RJA C19 O4 SING N N 18 RJA O4 HO4 SING N N 19 RJA C6 C5 SING N N 20 RJA C5 H5 SING N N 21 RJA O5 C17 SING N N 22 RJA O5 C21 SING N N 23 RJA C7 C6 DOUB N E 24 RJA C6 H6 SING N N 25 RJA C8 C7 SING N N 26 RJA C7 H7 SING N N 27 RJA C25 C8 SING N N 28 RJA C8 C9 DOUB N Z 29 RJA C9 C10 SING N N 30 RJA C9 H9 SING N N 31 RJA C11 C10 SING N N 32 RJA C10 C26 SING N N 33 RJA C10 H10 SING N N 34 RJA C11 C12 SING N N 35 RJA C11 H11 SING N N 36 RJA C11 H11A SING N N 37 RJA C12 C27 SING N N 38 RJA C12 C13 DOUB N E 39 RJA C13 C14 SING N N 40 RJA C13 H13 SING N N 41 RJA C14 C15 DOUB N E 42 RJA C14 H14 SING N N 43 RJA C15 C16 SING N N 44 RJA C15 H15 SING N N 45 RJA C16 C17 SING N N 46 RJA C16 H16 SING N N 47 RJA C17 C18 SING N N 48 RJA C17 H17 SING N N 49 RJA C18 C19 SING N N 50 RJA C18 H18 SING N N 51 RJA C18 H18A SING N N 52 RJA C20 C19 SING N N 53 RJA C19 H19 SING N N 54 RJA C21 C20 SING N N 55 RJA C28 C20 SING N N 56 RJA C20 H20 SING N N 57 RJA C22 C21 SING N N 58 RJA C21 H21 SING N N 59 RJA C23 C22 DOUB N E 60 RJA C22 H22 SING N N 61 RJA C24 C23 SING N N 62 RJA C23 H23 SING N N 63 RJA C24 H24 SING N N 64 RJA C24 H24A SING N N 65 RJA C24 H24B SING N N 66 RJA C25 H25 SING N N 67 RJA C25 H25A SING N N 68 RJA C25 H25B SING N N 69 RJA C26 H26 SING N N 70 RJA C26 H26A SING N N 71 RJA C26 H26B SING N N 72 RJA C27 H27 SING N N 73 RJA C27 H27A SING N N 74 RJA C27 H27B SING N N 75 RJA C28 H28 SING N N 76 RJA C28 H28A SING N N 77 RJA C28 H28B SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RJA SMILES ACDLabs 12.01 "O=C(O)CCCC(O)/C=C/C(=C\C(C)CC(=C\C=C\C(O)C1OC(/C=C/C)C(C(O)C1)C)\C)C" RJA InChI InChI 1.03 "InChI=1S/C28H44O6/c1-6-9-26-22(5)25(31)18-27(34-26)24(30)12-7-10-19(2)16-21(4)17-20(3)14-15-23(29)11-8-13-28(32)33/h6-7,9-10,12,14-15,17,21-27,29-31H,8,11,13,16,18H2,1-5H3,(H,32,33)/b9-6+,12-7+,15-14+,19-10+,20-17-/t21-,22+,23-,24-,25-,26+,27-/m1/s1" RJA InChIKey InChI 1.03 SSWVBXXPYARFKL-PUAIALDQSA-N RJA SMILES_CANONICAL CACTVS 3.370 "C\C=C\[C@@H]1O[C@H](C[C@@H](O)[C@@H]1C)[C@H](O)/C=C/C=C(C)/C[C@@H](C)/C=C(C)\C=C\[C@H](O)CCCC(O)=O" RJA SMILES CACTVS 3.370 "CC=C[CH]1O[CH](C[CH](O)[CH]1C)[CH](O)C=CC=C(C)C[CH](C)C=C(C)C=C[CH](O)CCCC(O)=O" RJA SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C/C=C/[C@H]1[C@H]([C@@H](C[C@@H](O1)[C@@H](/C=C/C=C(\C)/C[C@@H](C)/C=C(/C)\C=C\[C@@H](CCCC(=O)O)O)O)O)C" RJA SMILES "OpenEye OEToolkits" 1.7.6 "CC=CC1C(C(CC(O1)C(C=CC=C(C)CC(C)C=C(C)C=CC(CCCC(=O)O)O)O)O)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RJA "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,5R)-1,5-anhydro-5-[(1R,2E,4E,7R,8Z,10E,12R)-15-carboxy-1,12-dihydroxy-5,7,9-trimethylpentadeca-2,4,8,10-tetraen-1-yl]-2,4-dideoxy-2-methyl-1-[(1E)-prop-1-en-1-yl]-D-threo-pentitol" RJA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(5R,6E,8Z,10R,12E,14E,16R)-8,10,12-trimethyl-16-[(2R,4R,5S,6S)-5-methyl-4-oxidanyl-6-[(E)-prop-1-enyl]oxan-2-yl]-5,16-bis(oxidanyl)hexadeca-6,8,12,14-tetraenoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RJA "Create component" 2012-10-11 RCSB RJA "Other modification" 2012-11-14 RCSB RJA "Initial release" 2013-01-04 RCSB #