data_RK2 # _chem_comp.id RK2 _chem_comp.name "4-[2-methyl-3-[(2~{R})-2-pyridin-2-yloxypropyl]imidazo[4,5-b]pyridin-5-yl]pyridine-2,6-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H21 N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-30 _chem_comp.pdbx_modified_date 2021-05-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 375.427 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RK2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AKA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RK2 C1 C1 C 0 1 N N N 5.714 6.990 35.853 2.623 1.689 2.610 C1 RK2 1 RK2 N1 N1 N 0 1 Y N N 3.372 5.471 37.308 1.234 -1.475 1.057 N1 RK2 2 RK2 O1 O1 O 0 1 N N N 5.820 4.878 34.602 3.534 0.272 0.877 O1 RK2 3 RK2 C2 C2 C 0 1 N N R 4.984 5.731 35.461 2.316 0.671 1.510 C2 RK2 4 RK2 N2 N2 N 0 1 Y N N 1.848 6.164 38.766 1.322 -3.105 -0.391 N2 RK2 5 RK2 C3 C3 C 0 1 N N N 4.684 5.109 36.772 1.635 -0.554 2.123 C3 RK2 6 RK2 N3 N3 N 0 1 Y N N 1.914 4.441 35.667 -1.066 -0.739 0.478 N3 RK2 7 RK2 C4 C4 C 0 1 Y N N 3.135 6.111 38.492 1.985 -2.487 0.542 C4 RK2 8 RK2 N4 N4 N 0 1 N N N 1.969 2.245 31.087 -4.552 2.754 1.773 N4 RK2 9 RK2 C5 C5 C 0 1 N N N 4.222 6.653 39.340 3.381 -2.839 0.987 C5 RK2 10 RK2 N5 N5 N 0 1 Y N N -0.185 1.889 31.868 -5.546 1.481 0.070 N5 RK2 11 RK2 C6 C6 C 0 1 Y N N 1.214 5.533 37.692 0.098 -2.538 -0.530 C6 RK2 12 RK2 N6 N6 N 0 1 N N N -2.348 1.504 32.591 -6.668 0.299 -1.619 N6 RK2 13 RK2 C7 C7 C 0 1 Y N N -0.127 5.271 37.412 -0.998 -2.793 -1.362 C7 RK2 14 RK2 N7 N7 N 0 1 Y N N 5.490 3.540 32.789 3.210 2.025 -0.603 N7 RK2 15 RK2 C8 C8 C 0 1 Y N N -0.427 4.607 36.247 -2.110 -2.004 -1.234 C8 RK2 16 RK2 C9 C9 C 0 1 Y N N 0.616 4.164 35.395 -2.115 -0.966 -0.299 C9 RK2 17 RK2 C10 C10 C 0 1 Y N N 2.166 5.075 36.799 0.025 -1.480 0.395 C10 RK2 18 RK2 C11 C11 C 0 1 Y N N 0.346 3.395 34.159 -3.318 -0.108 -0.170 C11 RK2 19 RK2 C12 C12 C 0 1 Y N N 1.333 3.196 33.194 -3.358 0.934 0.760 C12 RK2 20 RK2 C13 C13 C 0 1 Y N N 1.031 2.461 32.036 -4.502 1.714 0.851 C13 RK2 21 RK2 C14 C14 C 0 1 Y N N -1.134 2.055 32.807 -5.546 0.503 -0.823 C14 RK2 22 RK2 C15 C15 C 0 1 Y N N -0.897 2.813 33.959 -4.440 -0.321 -0.974 C15 RK2 23 RK2 C16 C16 C 0 1 Y N N 5.352 3.704 34.096 3.938 1.000 -0.194 C16 RK2 24 RK2 C17 C17 C 0 1 Y N N 4.818 2.721 34.939 5.114 0.661 -0.851 C17 RK2 25 RK2 C18 C18 C 0 1 Y N N 4.449 1.516 34.373 5.516 1.412 -1.942 C18 RK2 26 RK2 C19 C19 C 0 1 Y N N 4.584 1.317 33.012 4.723 2.480 -2.340 C19 RK2 27 RK2 C20 C20 C 0 1 Y N N 5.100 2.353 32.253 3.566 2.759 -1.640 C20 RK2 28 RK2 H1 H1 H 0 1 N N N 5.066 7.606 36.493 1.694 1.993 3.093 H1 RK2 29 RK2 H2 H2 H 0 1 N N N 6.629 6.727 36.403 3.285 1.237 3.349 H2 RK2 30 RK2 H3 H3 H 0 1 N N N 5.980 7.556 34.948 3.108 2.562 2.173 H3 RK2 31 RK2 H4 H4 H 0 1 N N N 4.049 5.990 34.944 1.654 1.123 0.771 H4 RK2 32 RK2 H5 H5 H 0 1 N N N 4.722 4.016 36.655 0.754 -0.238 2.681 H5 RK2 33 RK2 H6 H6 H 0 1 N N N 5.453 5.427 37.491 2.330 -1.057 2.796 H6 RK2 34 RK2 H7 H7 H 0 1 N N N 1.589 1.661 30.369 -5.348 3.303 1.842 H7 RK2 35 RK2 H8 H8 H 0 1 N N N 2.250 3.119 30.691 -3.790 2.929 2.348 H8 RK2 36 RK2 H9 H9 H 0 1 N N N 3.790 7.111 40.242 3.332 -3.567 1.796 H9 RK2 37 RK2 H10 H10 H 0 1 N N N 4.900 5.838 39.632 3.934 -3.263 0.149 H10 RK2 38 RK2 H11 H11 H 0 1 N N N 4.783 7.413 38.776 3.888 -1.940 1.338 H11 RK2 39 RK2 H12 H12 H 0 1 N N N -2.348 1.030 31.711 -7.444 0.872 -1.518 H12 RK2 40 RK2 H13 H13 H 0 1 N N N -2.552 0.851 33.321 -6.674 -0.416 -2.274 H13 RK2 41 RK2 H14 H14 H 0 1 N N N -0.907 5.581 38.091 -0.968 -3.593 -2.087 H14 RK2 42 RK2 H15 H15 H 0 1 N N N -1.457 4.423 35.980 -2.973 -2.175 -1.860 H15 RK2 43 RK2 H16 H16 H 0 1 N N N 2.323 3.604 33.336 -2.509 1.129 1.400 H16 RK2 44 RK2 H17 H17 H 0 1 N N N -1.680 2.945 34.691 -4.446 -1.117 -1.705 H17 RK2 45 RK2 H18 H18 H 0 1 N N N 4.699 2.899 35.997 5.707 -0.176 -0.514 H18 RK2 46 RK2 H19 H19 H 0 1 N N N 4.054 0.727 34.996 6.426 1.172 -2.473 H19 RK2 47 RK2 H20 H20 H 0 1 N N N 4.296 0.382 32.555 5.008 3.085 -3.187 H20 RK2 48 RK2 H21 H21 H 0 1 N N N 5.197 2.212 31.187 2.946 3.589 -1.945 H21 RK2 49 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RK2 N4 C13 SING N N 1 RK2 N5 C13 DOUB Y N 2 RK2 N5 C14 SING Y N 3 RK2 C13 C12 SING Y N 4 RK2 C20 N7 DOUB Y N 5 RK2 C20 C19 SING Y N 6 RK2 N6 C14 SING N N 7 RK2 N7 C16 SING Y N 8 RK2 C14 C15 DOUB Y N 9 RK2 C19 C18 DOUB Y N 10 RK2 C12 C11 DOUB Y N 11 RK2 C15 C11 SING Y N 12 RK2 C16 O1 SING N N 13 RK2 C16 C17 DOUB Y N 14 RK2 C11 C9 SING N N 15 RK2 C18 C17 SING Y N 16 RK2 O1 C2 SING N N 17 RK2 C9 N3 DOUB Y N 18 RK2 C9 C8 SING Y N 19 RK2 C2 C1 SING N N 20 RK2 C2 C3 SING N N 21 RK2 N3 C10 SING Y N 22 RK2 C8 C7 DOUB Y N 23 RK2 C3 N1 SING N N 24 RK2 C10 N1 SING Y N 25 RK2 C10 C6 DOUB Y N 26 RK2 N1 C4 SING Y N 27 RK2 C7 C6 SING Y N 28 RK2 C6 N2 SING Y N 29 RK2 C4 N2 DOUB Y N 30 RK2 C4 C5 SING N N 31 RK2 C1 H1 SING N N 32 RK2 C1 H2 SING N N 33 RK2 C1 H3 SING N N 34 RK2 C2 H4 SING N N 35 RK2 C3 H5 SING N N 36 RK2 C3 H6 SING N N 37 RK2 N4 H7 SING N N 38 RK2 N4 H8 SING N N 39 RK2 C5 H9 SING N N 40 RK2 C5 H10 SING N N 41 RK2 C5 H11 SING N N 42 RK2 N6 H12 SING N N 43 RK2 N6 H13 SING N N 44 RK2 C7 H14 SING N N 45 RK2 C8 H15 SING N N 46 RK2 C12 H16 SING N N 47 RK2 C15 H17 SING N N 48 RK2 C17 H18 SING N N 49 RK2 C18 H19 SING N N 50 RK2 C19 H20 SING N N 51 RK2 C20 H21 SING N N 52 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RK2 InChI InChI 1.03 "InChI=1S/C20H21N7O/c1-12(28-19-5-3-4-8-23-19)11-27-13(2)24-16-7-6-15(25-20(16)27)14-9-17(21)26-18(22)10-14/h3-10,12H,11H2,1-2H3,(H4,21,22,26)/t12-/m1/s1" RK2 InChIKey InChI 1.03 CCUMIOKJQCVBML-GFCCVEGCSA-N RK2 SMILES_CANONICAL CACTVS 3.385 "C[C@H](Cn1c(C)nc2ccc(nc12)c3cc(N)nc(N)c3)Oc4ccccn4" RK2 SMILES CACTVS 3.385 "C[CH](Cn1c(C)nc2ccc(nc12)c3cc(N)nc(N)c3)Oc4ccccn4" RK2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1nc2ccc(nc2n1C[C@@H](C)Oc3ccccn3)c4cc(nc(c4)N)N" RK2 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1nc2ccc(nc2n1CC(C)Oc3ccccn3)c4cc(nc(c4)N)N" # _pdbx_chem_comp_identifier.comp_id RK2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[2-methyl-3-[(2~{R})-2-pyridin-2-yloxypropyl]imidazo[4,5-b]pyridin-5-yl]pyridine-2,6-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RK2 "Create component" 2020-09-30 PDBE RK2 "Initial release" 2021-05-26 RCSB ##