data_RK5 # _chem_comp.id RK5 _chem_comp.name "4-(2,3-dimethyl-1-benzofuran-5-yl)pyridine-2,6-diamine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H15 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-09-30 _chem_comp.pdbx_modified_date 2021-05-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 253.299 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RK5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AKF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RK5 C1 C1 C 0 1 N N N 32.851 19.533 23.933 5.779 0.404 -0.001 C1 RK5 1 RK5 C2 C2 C 0 1 Y N N 32.886 20.964 23.530 4.312 0.058 -0.000 C2 RK5 2 RK5 C3 C3 C 0 1 Y N N 32.850 21.552 22.303 3.314 0.951 0.002 C3 RK5 3 RK5 C4 C4 C 0 1 N N N 32.771 20.894 20.957 3.443 2.453 0.004 C4 RK5 4 RK5 C5 C5 C 0 1 Y N N 32.885 22.968 22.536 2.069 0.173 0.001 C5 RK5 5 RK5 C6 C6 C 0 1 Y N N 32.871 24.084 21.720 0.716 0.504 0.003 C6 RK5 6 RK5 C7 C7 C 0 1 Y N N 32.960 25.347 22.301 -0.235 -0.508 0.003 C7 RK5 7 RK5 C8 C8 C 0 1 Y N N 33.009 25.450 23.712 0.167 -1.847 0.001 C8 RK5 8 RK5 C9 C9 C 0 1 Y N N 32.999 24.352 24.538 1.503 -2.176 -0.001 C9 RK5 9 RK5 C10 C10 C 0 1 Y N N 32.943 23.137 23.908 2.468 -1.175 -0.001 C10 RK5 10 RK5 O1 O1 O 0 1 Y N N 32.940 21.913 24.532 3.817 -1.191 -0.008 O1 RK5 11 RK5 C11 C11 C 0 1 Y N N 32.860 26.558 21.441 -1.679 -0.167 0.005 C11 RK5 12 RK5 C12 C12 C 0 1 Y N N 32.851 26.420 20.058 -2.101 1.164 0.002 C12 RK5 13 RK5 C13 C13 C 0 1 Y N N 32.690 27.534 19.227 -3.460 1.442 -0.002 C13 RK5 14 RK5 N1 N1 N 0 1 N N N 32.735 27.363 17.903 -3.891 2.764 -0.006 N1 RK5 15 RK5 N2 N2 N 0 1 Y N N 32.533 28.778 19.726 -4.353 0.463 -0.002 N2 RK5 16 RK5 C14 C14 C 0 1 Y N N 32.450 28.907 21.070 -3.992 -0.812 0.001 C14 RK5 17 RK5 N3 N3 N 0 1 N N N 32.241 30.115 21.553 -4.967 -1.803 -0.001 N3 RK5 18 RK5 C15 C15 C 0 1 Y N N 32.584 27.820 21.957 -2.651 -1.170 0.004 C15 RK5 19 RK5 H1 H1 H 0 1 N N N 32.875 19.460 25.030 6.369 -0.513 -0.008 H1 RK5 20 RK5 H2 H2 H 0 1 N N N 31.928 19.068 23.555 6.013 0.993 -0.888 H2 RK5 21 RK5 H3 H3 H 0 1 N N N 33.723 19.012 23.511 6.016 0.982 0.892 H3 RK5 22 RK5 H4 H4 H 0 1 N N N 33.787 20.709 20.578 3.474 2.813 1.032 H4 RK5 23 RK5 H5 H5 H 0 1 N N N 32.234 19.938 21.047 4.360 2.740 -0.510 H5 RK5 24 RK5 H6 H6 H 0 1 N N N 32.234 21.552 20.258 2.587 2.892 -0.509 H6 RK5 25 RK5 H7 H7 H 0 1 N N N 32.792 23.978 20.648 0.410 1.539 0.006 H7 RK5 26 RK5 H8 H8 H 0 1 N N N 33.056 26.433 24.158 -0.577 -2.629 0.001 H8 RK5 27 RK5 H9 H9 H 0 1 N N N 33.033 24.441 25.614 1.803 -3.213 -0.002 H9 RK5 28 RK5 H10 H10 H 0 1 N N N 32.970 25.440 19.619 -1.378 1.967 0.002 H10 RK5 29 RK5 H11 H11 H 0 1 N N N 32.638 28.249 17.449 -4.840 2.965 -0.008 H11 RK5 30 RK5 H12 H12 H 0 1 N N N 33.611 26.952 17.650 -3.242 3.486 -0.005 H12 RK5 31 RK5 H13 H13 H 0 1 N N N 32.175 30.769 20.799 -5.906 -1.559 -0.003 H13 RK5 32 RK5 H14 H14 H 0 1 N N N 31.388 30.122 22.075 -4.709 -2.738 0.002 H14 RK5 33 RK5 H15 H15 H 0 1 N N N 32.474 27.965 23.022 -2.363 -2.211 0.002 H15 RK5 34 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RK5 N1 C13 SING N N 1 RK5 C13 N2 DOUB Y N 2 RK5 C13 C12 SING Y N 3 RK5 N2 C14 SING Y N 4 RK5 C12 C11 DOUB Y N 5 RK5 C4 C3 SING N N 6 RK5 C14 N3 SING N N 7 RK5 C14 C15 DOUB Y N 8 RK5 C11 C15 SING Y N 9 RK5 C11 C7 SING N N 10 RK5 C6 C7 DOUB Y N 11 RK5 C6 C5 SING Y N 12 RK5 C7 C8 SING Y N 13 RK5 C3 C5 SING Y N 14 RK5 C3 C2 DOUB Y N 15 RK5 C5 C10 DOUB Y N 16 RK5 C2 C1 SING N N 17 RK5 C2 O1 SING Y N 18 RK5 C8 C9 DOUB Y N 19 RK5 C10 O1 SING Y N 20 RK5 C10 C9 SING Y N 21 RK5 C1 H1 SING N N 22 RK5 C1 H2 SING N N 23 RK5 C1 H3 SING N N 24 RK5 C4 H4 SING N N 25 RK5 C4 H5 SING N N 26 RK5 C4 H6 SING N N 27 RK5 C6 H7 SING N N 28 RK5 C8 H8 SING N N 29 RK5 C9 H9 SING N N 30 RK5 C12 H10 SING N N 31 RK5 N1 H11 SING N N 32 RK5 N1 H12 SING N N 33 RK5 N3 H13 SING N N 34 RK5 N3 H14 SING N N 35 RK5 C15 H15 SING N N 36 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RK5 InChI InChI 1.03 "InChI=1S/C15H15N3O/c1-8-9(2)19-13-4-3-10(5-12(8)13)11-6-14(16)18-15(17)7-11/h3-7H,1-2H3,(H4,16,17,18)" RK5 InChIKey InChI 1.03 PZRAWCBVDRNTDQ-UHFFFAOYSA-N RK5 SMILES_CANONICAL CACTVS 3.385 "Cc1oc2ccc(cc2c1C)c3cc(N)nc(N)c3" RK5 SMILES CACTVS 3.385 "Cc1oc2ccc(cc2c1C)c3cc(N)nc(N)c3" RK5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(oc2c1cc(cc2)c3cc(nc(c3)N)N)C" RK5 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(oc2c1cc(cc2)c3cc(nc(c3)N)N)C" # _pdbx_chem_comp_identifier.comp_id RK5 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(2,3-dimethyl-1-benzofuran-5-yl)pyridine-2,6-diamine" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RK5 "Create component" 2020-09-30 PDBE RK5 "Initial release" 2021-05-26 RCSB ##