data_RKU # _chem_comp.id RKU _chem_comp.name "(3S)-3-(4-bromophenyl)-3-[(6-fluoro-1H-benzimidazole-4-carbonyl)amino]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H13 Br F N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-23 _chem_comp.pdbx_modified_date 2022-07-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 406.206 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RKU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SS5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RKU C17 C1 C 0 1 Y N N -46.444 -29.305 5.353 4.377 2.528 -2.269 C17 RKU 1 RKU C15 C2 C 0 1 Y N N -47.262 -29.309 3.352 3.463 1.273 -0.755 C15 RKU 2 RKU C14 C3 C 0 1 Y N N -47.562 -29.379 1.974 2.691 0.372 0.008 C14 RKU 3 RKU C13 C4 C 0 1 N N N -46.540 -29.841 0.937 1.589 -0.380 -0.621 C13 RKU 4 RKU C11 C5 C 0 1 Y N N -44.083 -32.782 -1.328 -2.451 -0.931 -1.323 C11 RKU 5 RKU C10 C6 C 0 1 Y N N -44.440 -33.965 -1.942 -3.576 -0.146 -1.154 C10 RKU 6 RKU C20 C7 C 0 1 Y N N -49.517 -28.564 3.786 4.769 1.794 1.212 C20 RKU 7 RKU C19 C8 C 0 1 Y N N -48.238 -28.895 4.243 4.504 1.983 -0.136 C19 RKU 8 RKU C02 C9 C 0 1 N N N -43.185 -31.997 2.420 0.637 -4.168 -0.098 C02 RKU 9 RKU C03 C10 C 0 1 N N N -43.062 -31.204 1.118 -0.525 -3.257 0.202 C03 RKU 10 RKU C04 C11 C 0 1 N N S -44.393 -31.011 0.405 -0.305 -1.906 -0.483 C04 RKU 11 RKU C05 C12 C 0 1 Y N N -44.812 -32.320 -0.246 -1.528 -1.045 -0.301 C05 RKU 12 RKU C06 C13 C 0 1 Y N N -45.899 -33.029 0.236 -1.727 -0.370 0.889 C06 RKU 13 RKU C07 C14 C 0 1 Y N N -46.257 -34.214 -0.373 -2.849 0.420 1.057 C07 RKU 14 RKU C08 C15 C 0 1 Y N N -45.529 -34.667 -1.453 -3.778 0.526 0.038 C08 RKU 15 RKU C21 C16 C 0 1 Y N N -49.798 -28.642 2.441 4.012 0.904 1.951 C21 RKU 16 RKU C23 C17 C 0 1 Y N N -48.829 -29.049 1.530 2.977 0.199 1.359 C23 RKU 17 RKU F22 F1 F 0 1 N N N -51.043 -28.313 2.014 4.278 0.727 3.264 F22 RKU 18 RKU N12 N1 N 0 1 N N N -45.371 -30.552 1.369 0.855 -1.239 0.113 N12 RKU 19 RKU N16 N2 N 0 1 Y N N -46.160 -29.554 4.084 3.438 1.653 -2.049 N16 RKU 20 RKU N18 N3 N 0 1 Y N N -47.696 -28.907 5.467 5.068 2.767 -1.124 N18 RKU 21 RKU O01 O1 O 0 1 N N N -42.850 -31.468 3.510 0.618 -5.442 0.324 O01 RKU 22 RKU O24 O2 O 0 1 N N N -46.709 -29.685 -0.222 1.343 -0.225 -1.801 O24 RKU 23 RKU O25 O3 O 0 1 N N N -43.633 -33.171 2.401 1.586 -3.751 -0.719 O25 RKU 24 RKU BR09 BR1 BR 0 0 N N N -46.068 -36.313 -2.285 -5.317 1.601 0.269 BR09 RKU 25 RKU H171 H1 H 0 0 N N N -45.751 -29.412 6.175 4.579 2.993 -3.223 H171 RKU 26 RKU H111 H2 H 0 0 N N N -43.237 -32.218 -1.691 -2.296 -1.459 -2.252 H111 RKU 27 RKU H101 H3 H 0 0 N N N -43.881 -34.336 -2.788 -4.298 -0.056 -1.953 H101 RKU 28 RKU H201 H4 H 0 0 N N N -50.279 -28.249 4.483 5.571 2.342 1.686 H201 RKU 29 RKU H032 H5 H 0 0 N N N -42.379 -31.742 0.444 -1.445 -3.707 -0.169 H032 RKU 30 RKU H031 H6 H 0 0 N N N -42.643 -30.214 1.350 -0.602 -3.109 1.280 H031 RKU 31 RKU H041 H7 H 0 0 N N N -44.264 -30.252 -0.381 -0.126 -2.063 -1.547 H041 RKU 32 RKU H061 H8 H 0 0 N N N -46.461 -32.658 1.080 -1.005 -0.460 1.688 H061 RKU 33 RKU H071 H9 H 0 0 N N N -47.100 -34.782 -0.007 -3.004 0.947 1.987 H071 RKU 34 RKU H231 H10 H 0 0 N N N -49.066 -29.107 0.478 2.390 -0.489 1.949 H231 RKU 35 RKU H121 H11 H 0 0 N N N -45.231 -30.732 2.343 1.095 -1.416 1.037 H121 RKU 36 RKU H181 H13 H 0 0 N N N -48.159 -28.658 6.318 5.818 3.375 -1.020 H181 RKU 37 RKU H2 H14 H 0 1 N N N -42.996 -32.083 4.219 1.386 -5.987 0.107 H2 RKU 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RKU BR09 C08 SING N N 1 RKU C10 C08 DOUB Y N 2 RKU C10 C11 SING Y N 3 RKU C08 C07 SING Y N 4 RKU C11 C05 DOUB Y N 5 RKU C07 C06 DOUB Y N 6 RKU C05 C06 SING Y N 7 RKU C05 C04 SING N N 8 RKU O24 C13 DOUB N N 9 RKU C04 C03 SING N N 10 RKU C04 N12 SING N N 11 RKU C13 N12 SING N N 12 RKU C13 C14 SING N N 13 RKU C03 C02 SING N N 14 RKU C23 C14 DOUB Y N 15 RKU C23 C21 SING Y N 16 RKU C14 C15 SING Y N 17 RKU F22 C21 SING N N 18 RKU O25 C02 DOUB N N 19 RKU C02 O01 SING N N 20 RKU C21 C20 DOUB Y N 21 RKU C15 N16 SING Y N 22 RKU C15 C19 DOUB Y N 23 RKU C20 C19 SING Y N 24 RKU N16 C17 DOUB Y N 25 RKU C19 N18 SING Y N 26 RKU C17 N18 SING Y N 27 RKU C17 H171 SING N N 28 RKU C11 H111 SING N N 29 RKU C10 H101 SING N N 30 RKU C20 H201 SING N N 31 RKU C03 H032 SING N N 32 RKU C03 H031 SING N N 33 RKU C04 H041 SING N N 34 RKU C06 H061 SING N N 35 RKU C07 H071 SING N N 36 RKU C23 H231 SING N N 37 RKU N12 H121 SING N N 38 RKU N18 H181 SING N N 39 RKU O01 H2 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RKU SMILES ACDLabs 12.01 "Brc1ccc(cc1)C(CC(=O)O)NC(=O)c1cc(F)cc2[NH]cnc12" RKU InChI InChI 1.06 "InChI=1S/C17H13BrFN3O3/c18-10-3-1-9(2-4-10)13(7-15(23)24)22-17(25)12-5-11(19)6-14-16(12)21-8-20-14/h1-6,8,13H,7H2,(H,20,21)(H,22,25)(H,23,24)/t13-/m0/s1" RKU InChIKey InChI 1.06 QCPOODMPJHYVRY-ZDUSSCGKSA-N RKU SMILES_CANONICAL CACTVS 3.385 "OC(=O)C[C@H](NC(=O)c1cc(F)cc2[nH]cnc12)c3ccc(Br)cc3" RKU SMILES CACTVS 3.385 "OC(=O)C[CH](NC(=O)c1cc(F)cc2[nH]cnc12)c3ccc(Br)cc3" RKU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1[C@H](CC(=O)O)NC(=O)c2cc(cc3c2nc[nH]3)F)Br" RKU SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(CC(=O)O)NC(=O)c2cc(cc3c2nc[nH]3)F)Br" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RKU "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-3-(4-bromophenyl)-3-[(6-fluoro-1H-benzimidazole-4-carbonyl)amino]propanoic acid" RKU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-(4-bromophenyl)-3-[(6-fluoranyl-1~{H}-benzimidazol-4-yl)carbonylamino]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RKU "Create component" 2022-06-23 RCSB RKU "Initial release" 2022-07-06 RCSB #