data_RNF # _chem_comp.id RNF _chem_comp.name "(2~{R})-2-[[6-[(4-phenylphenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H30 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-05 _chem_comp.pdbx_modified_date 2023-09-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 430.545 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RNF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BUN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RNF N1 N1 N 0 1 N N N -63.878 22.328 -5.269 0.008 0.349 0.094 N1 RNF 1 RNF C2 C1 C 0 1 Y N N -62.971 23.018 -5.979 -1.375 0.339 0.107 C2 RNF 2 RNF N3 N2 N 0 1 Y N N -61.057 24.435 -7.426 -4.094 0.280 0.123 N3 RNF 3 RNF C4 C2 C 0 1 Y N N -62.196 24.000 -7.965 -3.506 1.469 0.047 C4 RNF 4 RNF C5 C3 C 0 1 Y N N -63.193 23.306 -7.330 -2.102 1.539 0.037 C5 RNF 5 RNF C6 C4 C 0 1 Y N N -63.827 23.557 -9.332 -2.850 3.572 -0.085 C6 RNF 6 RNF C7 C5 C 0 1 N N N -61.870 24.841 -10.338 -5.348 3.202 -0.058 C7 RNF 7 RNF C8 C6 C 0 1 N N N -60.566 24.105 -10.652 -5.616 4.115 1.141 C8 RNF 8 RNF C9 C7 C 0 1 N N N -61.616 26.285 -9.977 -5.621 3.968 -1.353 C9 RNF 9 RNF C11 C8 C 0 1 N N N -58.597 22.588 -4.752 -4.084 -4.370 1.031 C11 RNF 10 RNF C14 C9 C 0 1 Y N N -64.092 22.623 -2.834 2.230 -0.627 0.126 C14 RNF 11 RNF C15 C10 C 0 1 Y N N -63.191 23.301 -2.036 2.892 -0.576 -1.087 C15 RNF 12 RNF C16 C11 C 0 1 Y N N -63.635 24.104 -1.003 4.248 -0.320 -1.127 C16 RNF 13 RNF O1 O1 O 0 1 N N N -59.197 22.902 -3.459 -5.213 -4.683 0.213 O1 RNF 14 RNF C1 C12 C 0 1 N N N -63.615 21.752 -3.967 0.751 -0.912 0.163 C1 RNF 15 RNF C10 C13 C 0 1 N N R -58.507 23.845 -5.612 -3.245 -3.286 0.350 C10 RNF 16 RNF C12 C14 C 0 1 N N N -58.224 23.548 -7.079 -2.869 -3.743 -1.060 C12 RNF 17 RNF C13 C15 C 0 1 N N N -56.941 22.793 -7.282 -1.929 -2.716 -1.695 C13 RNF 18 RNF C17 C16 C 0 1 Y N N -64.991 24.279 -0.757 4.950 -0.114 0.059 C17 RNF 19 RNF C18 C17 C 0 1 Y N N -65.882 23.620 -1.592 4.278 -0.166 1.279 C18 RNF 20 RNF C19 C18 C 0 1 Y N N -65.443 22.813 -2.623 2.922 -0.423 1.306 C19 RNF 21 RNF C20 C19 C 0 1 Y N N -65.490 25.181 0.319 6.408 0.161 0.023 C20 RNF 22 RNF C21 C20 C 0 1 Y N N -66.847 25.264 0.608 7.110 0.367 1.209 C21 RNF 23 RNF C22 C21 C 0 1 Y N N -67.317 26.119 1.587 8.465 0.622 1.170 C22 RNF 24 RNF C23 C22 C 0 1 Y N N -66.441 26.924 2.270 9.127 0.673 -0.043 C23 RNF 25 RNF C24 C23 C 0 1 Y N N -65.103 26.888 1.986 8.436 0.469 -1.224 C24 RNF 26 RNF C25 C24 C 0 1 Y N N -64.632 26.028 1.012 7.081 0.207 -1.196 C25 RNF 27 RNF C3 C25 C 0 1 Y N N -60.915 24.142 -6.123 -3.371 -0.826 0.194 C3 RNF 28 RNF N2 N3 N 0 1 Y N N -61.827 23.451 -5.405 -2.045 -0.806 0.181 N2 RNF 29 RNF N4 N4 N 0 1 Y N N -64.219 23.019 -8.206 -1.768 2.851 -0.046 N4 RNF 30 RNF N5 N5 N 0 1 Y N N -62.599 24.147 -9.263 -3.950 2.765 -0.035 N5 RNF 31 RNF N6 N6 N 0 1 N N N -59.787 24.552 -5.505 -4.022 -2.046 0.272 N6 RNF 32 RNF H12 H1 H 0 1 N N N -64.651 22.949 -5.140 0.487 1.191 0.036 H12 RNF 33 RNF H61 H2 H 0 1 N N N -64.421 23.536 -10.234 -2.875 4.649 -0.153 H61 RNF 34 RNF H71 H3 H 0 1 N N N -62.491 24.823 -11.246 -6.002 2.332 -0.005 H71 RNF 35 RNF H81 H4 H 0 1 N N N -60.788 23.059 -10.910 -4.962 4.985 1.088 H81 RNF 36 RNF H82 H5 H 0 1 N N N -60.065 24.593 -11.500 -6.656 4.440 1.124 H82 RNF 37 RNF H83 H6 H 0 1 N N N -59.908 24.134 -9.771 -5.421 3.569 2.064 H83 RNF 38 RNF H91 H7 H 0 1 N N N -62.572 26.782 -9.758 -5.430 3.318 -2.207 H91 RNF 39 RNF H93 H8 H 0 1 N N N -60.967 26.332 -9.090 -6.661 4.294 -1.370 H93 RNF 40 RNF H92 H9 H 0 1 N N N -61.124 26.792 -10.820 -4.967 4.839 -1.406 H92 RNF 41 RNF H112 H10 H 0 0 N N N -59.216 21.839 -5.267 -4.426 -4.010 2.001 H112 RNF 42 RNF H111 H11 H 0 0 N N N -57.587 22.183 -4.595 -3.477 -5.265 1.169 H111 RNF 43 RNF H151 H12 H 0 0 N N N -62.132 23.203 -2.221 2.347 -0.737 -2.006 H151 RNF 44 RNF H161 H13 H 0 0 N N N -62.914 24.605 -0.375 4.764 -0.281 -2.075 H161 RNF 45 RNF H11 H14 H 0 1 N N N -59.248 22.113 -2.933 -5.790 -5.364 0.583 H11 RNF 46 RNF H14 H15 H 0 1 N N N -64.127 20.781 -3.903 0.504 -1.430 1.089 H14 RNF 47 RNF H13 H16 H 0 1 N N N -62.530 21.602 -3.862 0.481 -1.539 -0.687 H13 RNF 48 RNF H101 H17 H 0 0 N N N -57.702 24.483 -5.220 -2.339 -3.111 0.930 H101 RNF 49 RNF H122 H18 H 0 0 N N N -58.161 24.501 -7.625 -2.369 -4.710 -1.008 H122 RNF 50 RNF H121 H19 H 0 0 N N N -59.053 22.948 -7.483 -3.771 -3.832 -1.666 H121 RNF 51 RNF H131 H20 H 0 0 N N N -56.790 22.608 -8.356 -2.429 -1.749 -1.747 H131 RNF 52 RNF H133 H21 H 0 0 N N N -56.101 23.386 -6.891 -1.027 -2.626 -1.089 H133 RNF 53 RNF H132 H22 H 0 0 N N N -56.992 21.833 -6.748 -1.661 -3.041 -2.700 H132 RNF 54 RNF H181 H23 H 0 0 N N N -66.943 23.741 -1.432 4.817 -0.007 2.201 H181 RNF 55 RNF H191 H24 H 0 0 N N N -66.161 22.328 -3.268 2.400 -0.463 2.251 H191 RNF 56 RNF H211 H25 H 0 0 N N N -67.546 24.650 0.059 6.594 0.328 2.157 H211 RNF 57 RNF H221 H26 H 0 0 N N N -68.372 26.153 1.814 9.010 0.782 2.089 H221 RNF 58 RNF H231 H27 H 0 0 N N N -66.810 27.590 3.036 10.188 0.873 -0.069 H231 RNF 59 RNF H241 H28 H 0 0 N N N -64.418 27.529 2.521 8.957 0.511 -2.168 H241 RNF 60 RNF H251 H29 H 0 0 N N N -63.576 26.013 0.785 6.543 0.043 -2.118 H251 RNF 61 RNF H62 H30 H 0 1 N N N -59.616 25.480 -5.835 -4.991 -2.080 0.274 H62 RNF 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RNF C8 C7 SING N N 1 RNF C7 C9 SING N N 2 RNF C7 N5 SING N N 3 RNF C6 N5 SING Y N 4 RNF C6 N4 DOUB Y N 5 RNF N5 C4 SING Y N 6 RNF N4 C5 SING Y N 7 RNF C4 N3 DOUB Y N 8 RNF C4 C5 SING Y N 9 RNF N3 C3 SING Y N 10 RNF C5 C2 DOUB Y N 11 RNF C13 C12 SING N N 12 RNF C12 C10 SING N N 13 RNF C3 N6 SING N N 14 RNF C3 N2 DOUB Y N 15 RNF C2 N2 SING Y N 16 RNF C2 N1 SING N N 17 RNF C10 N6 SING N N 18 RNF C10 C11 SING N N 19 RNF N1 C1 SING N N 20 RNF C11 O1 SING N N 21 RNF C1 C14 SING N N 22 RNF C14 C19 DOUB Y N 23 RNF C14 C15 SING Y N 24 RNF C19 C18 SING Y N 25 RNF C15 C16 DOUB Y N 26 RNF C18 C17 DOUB Y N 27 RNF C16 C17 SING Y N 28 RNF C17 C20 SING N N 29 RNF C20 C21 DOUB Y N 30 RNF C20 C25 SING Y N 31 RNF C21 C22 SING Y N 32 RNF C25 C24 DOUB Y N 33 RNF C22 C23 DOUB Y N 34 RNF C24 C23 SING Y N 35 RNF N1 H12 SING N N 36 RNF C6 H61 SING N N 37 RNF C7 H71 SING N N 38 RNF C8 H81 SING N N 39 RNF C8 H82 SING N N 40 RNF C8 H83 SING N N 41 RNF C9 H91 SING N N 42 RNF C9 H93 SING N N 43 RNF C9 H92 SING N N 44 RNF C11 H112 SING N N 45 RNF C11 H111 SING N N 46 RNF C15 H151 SING N N 47 RNF C16 H161 SING N N 48 RNF O1 H11 SING N N 49 RNF C1 H14 SING N N 50 RNF C1 H13 SING N N 51 RNF C10 H101 SING N N 52 RNF C12 H122 SING N N 53 RNF C12 H121 SING N N 54 RNF C13 H131 SING N N 55 RNF C13 H133 SING N N 56 RNF C13 H132 SING N N 57 RNF C18 H181 SING N N 58 RNF C19 H191 SING N N 59 RNF C21 H211 SING N N 60 RNF C22 H221 SING N N 61 RNF C23 H231 SING N N 62 RNF C24 H241 SING N N 63 RNF C25 H251 SING N N 64 RNF N6 H62 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RNF InChI InChI 1.06 "InChI=1S/C25H30N6O/c1-4-21(15-32)28-25-29-23(22-24(30-25)31(16-27-22)17(2)3)26-14-18-10-12-20(13-11-18)19-8-6-5-7-9-19/h5-13,16-17,21,32H,4,14-15H2,1-3H3,(H2,26,28,29,30)/t21-/m1/s1" RNF InChIKey InChI 1.06 BRJSFOFBYVFKCP-OAQYLSRUSA-N RNF SMILES_CANONICAL CACTVS 3.385 "CC[C@H](CO)Nc1nc(NCc2ccc(cc2)c3ccccc3)c4ncn(C(C)C)c4n1" RNF SMILES CACTVS 3.385 "CC[CH](CO)Nc1nc(NCc2ccc(cc2)c3ccccc3)c4ncn(C(C)C)c4n1" RNF SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC[C@H](CO)Nc1nc(c2c(n1)n(cn2)C(C)C)NCc3ccc(cc3)c4ccccc4" RNF SMILES "OpenEye OEToolkits" 3.1.0.0 "CCC(CO)Nc1nc(c2c(n1)n(cn2)C(C)C)NCc3ccc(cc3)c4ccccc4" # _pdbx_chem_comp_identifier.comp_id RNF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(2~{R})-2-[[6-[(4-phenylphenyl)methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RNF "Create component" 2022-12-05 PDBE RNF "Initial release" 2023-09-13 RCSB #