data_RNL # _chem_comp.id RNL _chem_comp.name "(1R,2S)-2-({2-[(4S)-7-methyl-8-oxo-7,8-dihydro[1,2,4]triazolo[4,3-a]pyrazin-3-yl]ethyl}carbamoyl)cyclopropane-1-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H15 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-23 _chem_comp.pdbx_modified_date 2022-07-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 305.289 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RNL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SSD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RNL N1 N1 N 0 1 N N N -50.731 -29.158 7.529 5.032 0.933 -0.260 N1 RNL 1 RNL O4 O1 O 0 1 N N N -43.135 -31.476 3.686 -6.313 -1.730 -0.221 O4 RNL 2 RNL C13 C1 C 0 1 N N N -51.374 -29.116 6.330 4.810 -0.392 -0.404 C13 RNL 3 RNL O2 O2 O 0 1 N N N -44.532 -28.714 1.951 -2.855 0.939 -1.293 O2 RNL 4 RNL C12 C2 C 0 1 Y N N -50.578 -29.222 5.175 3.500 -0.928 -0.012 C12 RNL 5 RNL C11 C3 C 0 1 N N N -43.416 -32.204 2.709 -5.315 -0.832 -0.211 C11 RNL 6 RNL O3 O3 O 0 1 N N N -52.573 -28.992 6.242 5.674 -1.124 -0.850 O3 RNL 7 RNL C10 C4 C 0 1 N N R -43.071 -31.800 1.278 -5.527 0.523 0.414 C10 RNL 8 RNL C9 C5 C 0 1 N N N -42.306 -30.497 1.078 -5.464 1.743 -0.508 C9 RNL 9 RNL C8 C6 C 0 1 N N S -43.768 -30.571 0.658 -4.325 1.468 0.476 C8 RNL 10 RNL C7 C7 C 0 1 N N N -44.778 -29.767 1.467 -3.020 0.972 -0.092 C7 RNL 11 RNL C6 C8 C 0 1 N N N -47.212 -29.686 2.201 -0.768 0.082 0.182 C6 RNL 12 RNL C5 C9 C 0 1 N N N -47.261 -29.614 3.746 0.168 -0.315 1.326 C5 RNL 13 RNL C4 C10 C 0 1 Y N N -48.747 -29.433 4.081 1.473 -0.811 0.757 C4 RNL 14 RNL C3 C11 C 0 1 N N N -48.662 -29.407 6.388 2.854 1.283 0.601 C3 RNL 15 RNL C2 C12 C 0 1 N N N -49.387 -29.305 7.573 4.043 1.755 0.247 C2 RNL 16 RNL C1 C13 C 0 1 N N N -51.501 -29.066 8.778 6.330 1.500 -0.636 C1 RNL 17 RNL O1 O4 O 0 1 N N N -43.999 -33.309 2.876 -4.247 -1.110 -0.703 O1 RNL 18 RNL N2 N2 N 0 1 Y N N -49.315 -29.354 5.241 2.556 -0.062 0.485 N2 RNL 19 RNL N3 N3 N 0 1 N N N -46.088 -30.377 1.549 -2.036 0.564 0.734 N3 RNL 20 RNL N4 N4 N 0 1 Y N N -49.702 -29.334 3.150 1.758 -2.052 0.439 N4 RNL 21 RNL N5 N5 N 0 1 Y N N -50.901 -29.197 3.881 2.960 -2.126 -0.018 N5 RNL 22 RNL H15 H1 H 0 1 N N N -43.426 -31.895 4.488 -6.130 -2.585 -0.632 H15 RNL 23 RNL H2 H2 H 0 1 N N N -42.830 -32.619 0.584 -6.234 0.554 1.242 H2 RNL 24 RNL H14 H3 H 0 1 N N N -41.519 -30.436 0.312 -5.271 1.566 -1.566 H14 RNL 25 RNL H13 H4 H 0 1 N N N -42.017 -29.892 1.950 -6.131 2.576 -0.285 H13 RNL 26 RNL H1 H5 H 0 1 N N N -43.955 -30.627 -0.425 -4.241 2.120 1.345 H1 RNL 27 RNL H10 H6 H 0 1 N N N -47.210 -28.650 1.831 -0.305 0.873 -0.408 H10 RNL 28 RNL H11 H7 H 0 1 N N N -48.133 -30.191 1.874 -0.954 -0.784 -0.453 H11 RNL 29 RNL H9 H8 H 0 1 N N N -46.874 -30.543 4.190 0.354 0.551 1.961 H9 RNL 30 RNL H8 H9 H 0 1 N N N -46.674 -28.759 4.113 -0.295 -1.106 1.916 H8 RNL 31 RNL H7 H10 H 0 1 N N N -47.589 -29.527 6.407 2.109 1.960 0.993 H7 RNL 32 RNL H6 H11 H 0 1 N N N -48.877 -29.343 8.524 4.244 2.810 0.358 H6 RNL 33 RNL H3 H12 H 0 1 N N N -50.815 -29.117 9.637 6.326 2.574 -0.446 H3 RNL 34 RNL H4 H13 H 0 1 N N N -52.048 -28.112 8.802 7.116 1.030 -0.046 H4 RNL 35 RNL H5 H14 H 0 1 N N N -52.216 -29.900 8.830 6.512 1.319 -1.695 H5 RNL 36 RNL H12 H15 H 0 1 N N N -46.232 -31.285 1.155 -2.168 0.590 1.695 H12 RNL 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RNL C8 C9 SING N N 1 RNL C8 C10 SING N N 2 RNL C8 C7 SING N N 3 RNL C9 C10 SING N N 4 RNL C10 C11 SING N N 5 RNL C7 N3 SING N N 6 RNL C7 O2 DOUB N N 7 RNL N3 C6 SING N N 8 RNL C6 C5 SING N N 9 RNL C11 O1 DOUB N N 10 RNL C11 O4 SING N N 11 RNL N4 N5 SING Y N 12 RNL N4 C4 DOUB Y N 13 RNL C5 C4 SING N N 14 RNL N5 C12 DOUB Y N 15 RNL C4 N2 SING Y N 16 RNL C12 N2 SING Y N 17 RNL C12 C13 SING N N 18 RNL N2 C3 SING N N 19 RNL O3 C13 DOUB N N 20 RNL C13 N1 SING N N 21 RNL C3 C2 DOUB N N 22 RNL N1 C2 SING N N 23 RNL N1 C1 SING N N 24 RNL O4 H15 SING N N 25 RNL C10 H2 SING N N 26 RNL C9 H14 SING N N 27 RNL C9 H13 SING N N 28 RNL C8 H1 SING N N 29 RNL C6 H10 SING N N 30 RNL C6 H11 SING N N 31 RNL C5 H9 SING N N 32 RNL C5 H8 SING N N 33 RNL C3 H7 SING N N 34 RNL C2 H6 SING N N 35 RNL C1 H3 SING N N 36 RNL C1 H4 SING N N 37 RNL C1 H5 SING N N 38 RNL N3 H12 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RNL SMILES ACDLabs 12.01 "O=C(O)C1CC1C(=O)NCCc1nnc2n1C=CN(C)C2=O" RNL InChI InChI 1.06 "InChI=1S/C13H15N5O4/c1-17-4-5-18-9(15-16-10(18)12(17)20)2-3-14-11(19)7-6-8(7)13(21)22/h4-5,7-8H,2-3,6H2,1H3,(H,14,19)(H,21,22)/t7-,8+/m0/s1" RNL InChIKey InChI 1.06 ZHMWBBORZYXPPK-JGVFFNPUSA-N RNL SMILES_CANONICAL CACTVS 3.385 "CN1C=Cn2c(CCNC(=O)[C@H]3C[C@H]3C(O)=O)nnc2C1=O" RNL SMILES CACTVS 3.385 "CN1C=Cn2c(CCNC(=O)[CH]3C[CH]3C(O)=O)nnc2C1=O" RNL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1C=Cn2c(nnc2C1=O)CCNC(=O)[C@H]3C[C@H]3C(=O)O" RNL SMILES "OpenEye OEToolkits" 2.0.7 "CN1C=Cn2c(nnc2C1=O)CCNC(=O)C3CC3C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RNL "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-2-({2-[(4S)-7-methyl-8-oxo-7,8-dihydro[1,2,4]triazolo[4,3-a]pyrazin-3-yl]ethyl}carbamoyl)cyclopropane-1-carboxylic acid" RNL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-2-[2-(7-methyl-8-oxidanylidene-[1,2,4]triazolo[4,3-a]pyrazin-3-yl)ethylcarbamoyl]cyclopropane-1-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RNL "Create component" 2022-06-23 RCSB RNL "Initial release" 2022-07-06 RCSB #