data_RNQ # _chem_comp.id RNQ _chem_comp.name "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-5-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2,4-bis(oxidanyl)oxan-3-yl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H25 N O11" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-12 _chem_comp.pdbx_modified_date 2025-11-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 383.348 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RNQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AN1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RNQ O3 O1 O 0 1 N N N N N N 53.005 40.629 -1.582 5.505 0.761 0.943 O3 RNQ 1 RNQ C1 C1 C 0 1 N N S N N N 49.735 41.920 0.057 1.856 0.405 0.131 C1 RNQ 2 RNQ O5 O2 O 0 1 N N N N N N 49.388 42.709 -1.095 1.936 -0.969 -0.251 O5 RNQ 3 RNQ C5 C2 C 0 1 N N R N N N 50.466 43.512 -1.564 3.073 -1.286 -1.057 C5 RNQ 4 RNQ C6 C3 C 0 1 N N N N N N 49.943 44.436 -2.656 3.039 -2.770 -1.427 C6 RNQ 5 RNQ O6 O3 O 0 1 N N N N N N 50.961 45.380 -3.052 1.904 -3.027 -2.257 O6 RNQ 6 RNQ C4 C4 C 0 1 N N R N N N 51.551 42.568 -2.101 4.352 -0.985 -0.272 C4 RNQ 7 RNQ O4 O4 O 0 1 N N N N N N 51.036 41.797 -3.189 4.404 -1.812 0.892 O4 RNQ 8 RNQ C3 C5 C 0 1 N N S N N N 52.035 41.573 -1.022 4.350 0.489 0.147 C3 RNQ 9 RNQ C2 C6 C 0 1 N N R N N N 50.822 40.908 -0.297 3.086 0.775 0.964 C2 RNQ 10 RNQ O2 O5 O 0 1 N N N N N N 51.199 40.209 0.878 3.038 2.163 1.298 O2 RNQ 11 RNQ C11 C7 C 0 1 N N R N N N 45.338 42.260 2.908 -3.329 1.197 -0.130 C11 RNQ 12 RNQ O1 O6 O 0 1 N N N N N N 44.519 42.755 3.977 -4.527 1.180 -0.909 O1 RNQ 13 RNQ O51 O7 O 0 1 N N N N N N 46.434 41.476 3.446 -2.288 1.837 -0.870 O51 RNQ 14 RNQ C51 C8 C 0 1 N N R N N N 47.171 40.759 2.440 -1.047 1.931 -0.168 C51 RNQ 15 RNQ C61 C9 C 0 1 N N N N N N 48.225 39.841 3.105 -0.020 2.656 -1.042 C61 RNQ 16 RNQ O61 O8 O 0 1 N N N N N N 47.688 39.118 4.247 -0.438 4.007 -1.245 O61 RNQ 17 RNQ C41 C10 C 0 1 N N S N N N 47.728 41.813 1.464 -0.538 0.524 0.156 C41 RNQ 18 RNQ O41 O9 O 0 1 N N N N N N 48.560 41.209 0.465 0.675 0.616 0.907 O41 RNQ 19 RNQ C31 C11 C 0 1 N N R N N N 46.569 42.609 0.858 -1.597 -0.215 0.980 C31 RNQ 20 RNQ O31 O10 O 0 1 N N N N N N 47.047 43.501 -0.142 -1.162 -1.554 1.225 O31 RNQ 21 RNQ C21 C12 C 0 1 N N R N N N 45.858 43.378 1.980 -2.912 -0.239 0.197 C21 RNQ 22 RNQ N2 N1 N 0 1 N N N N N N 44.775 44.273 1.554 -3.953 -0.879 1.006 N2 RNQ 23 RNQ C7 C13 C 0 1 N N N N N N 44.927 45.545 1.135 -5.008 -1.466 0.406 C7 RNQ 24 RNQ C8 C14 C 0 1 N N N N N N 43.654 46.344 0.960 -6.077 -2.124 1.239 C8 RNQ 25 RNQ O7 O11 O 0 1 N N N N N N 46.023 46.054 0.930 -5.096 -1.464 -0.803 O7 RNQ 26 RNQ HO3 H1 H 0 1 N N N N N N 53.290 40.027 -0.904 5.569 1.678 1.244 HO3 RNQ 27 RNQ H1 H2 H 0 1 N N N N N N 50.095 42.567 0.870 1.821 1.030 -0.762 H1 RNQ 28 RNQ H5 H3 H 0 1 N N N N N N 50.886 44.116 -0.746 3.054 -0.684 -1.965 H5 RNQ 29 RNQ H62 H4 H 0 1 N N N N N N 49.068 44.985 -2.277 3.950 -3.031 -1.966 H62 RNQ 30 RNQ H61 H5 H 0 1 N N N N N N 49.649 43.834 -3.529 2.969 -3.369 -0.520 H61 RNQ 31 RNQ HO6 H6 H 0 1 N N N N N N 50.619 45.948 -3.733 1.819 -3.951 -2.531 HO6 RNQ 32 RNQ H4 H7 H 0 1 N N N N N N 52.409 43.169 -2.435 5.221 -1.184 -0.900 H4 RNQ 33 RNQ HO4 H8 H 0 1 N N N N N N 51.714 41.216 -3.515 5.190 -1.674 1.438 HO4 RNQ 34 RNQ H3 H9 H 0 1 N N N N N N 52.559 42.170 -0.261 4.363 1.120 -0.741 H3 RNQ 35 RNQ H2 H10 H 0 1 N N N N N N 50.381 40.191 -1.006 3.100 0.179 1.877 H2 RNQ 36 RNQ HO2 H11 H 0 1 N N N N N N 50.428 39.825 1.279 2.261 2.416 1.817 HO2 RNQ 37 RNQ H11 H12 H 0 1 N N N N N N 44.721 41.594 2.287 -3.506 1.744 0.797 H11 RNQ 38 RNQ HO1 H13 H 0 1 N N N N N N 44.227 42.029 4.515 -4.849 2.059 -1.154 HO1 RNQ 39 RNQ H51 H14 H 0 1 N N N N N N 46.477 40.116 1.878 -1.193 2.488 0.757 H51 RNQ 40 RNQ H611 H15 H 0 0 N N N N N N 48.579 39.113 2.361 0.950 2.646 -0.546 H611 RNQ 41 RNQ H621 H16 H 0 0 N N N N N N 49.069 40.460 3.444 0.058 2.151 -2.005 H621 RNQ 42 RNQ HO61 H17 H 0 0 N N N N N N 48.367 38.569 4.623 0.167 4.528 -1.791 HO61 RNQ 43 RNQ H41 H18 H 0 1 N N N N N N 48.337 42.515 2.052 -0.352 -0.019 -0.770 H41 RNQ 44 RNQ H31 H19 H 0 1 N N N N N N 45.854 41.900 0.416 -1.746 0.300 1.929 H31 RNQ 45 RNQ HO31 H20 H 0 0 N N N N N N 46.786 44.389 0.074 -1.785 -2.082 1.743 HO31 RNQ 46 RNQ H21 H21 H 0 1 N N N N N N 46.611 43.960 2.531 -2.775 -0.798 -0.729 H21 RNQ 47 RNQ HN2 H22 H 0 1 N N N N N N 43.844 43.907 1.577 -3.882 -0.881 1.973 HN2 RNQ 48 RNQ H83 H23 H 0 1 N N N N N N 43.903 47.368 0.644 -6.851 -1.395 1.478 H83 RNQ 49 RNQ H82 H24 H 0 1 N N N N N N 43.024 45.867 0.195 -6.517 -2.950 0.679 H82 RNQ 50 RNQ H81 H25 H 0 1 N N N N N N 43.109 46.378 1.915 -5.638 -2.504 2.161 H81 RNQ 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RNQ O4 C4 SING N N 1 RNQ O6 C6 SING N N 2 RNQ C6 C5 SING N N 3 RNQ C4 C5 SING N N 4 RNQ C4 C3 SING N N 5 RNQ O3 C3 SING N N 6 RNQ C5 O5 SING N N 7 RNQ O5 C1 SING N N 8 RNQ C3 C2 SING N N 9 RNQ C2 C1 SING N N 10 RNQ C2 O2 SING N N 11 RNQ O31 C31 SING N N 12 RNQ C1 O41 SING N N 13 RNQ O41 C41 SING N N 14 RNQ C31 C41 SING N N 15 RNQ C31 C21 SING N N 16 RNQ O7 C7 DOUB N N 17 RNQ C8 C7 SING N N 18 RNQ C7 N2 SING N N 19 RNQ C41 C51 SING N N 20 RNQ N2 C21 SING N N 21 RNQ C21 C11 SING N N 22 RNQ C51 C61 SING N N 23 RNQ C51 O51 SING N N 24 RNQ C11 O51 SING N N 25 RNQ C11 O1 SING N N 26 RNQ C61 O61 SING N N 27 RNQ O3 HO3 SING N N 28 RNQ C1 H1 SING N N 29 RNQ C5 H5 SING N N 30 RNQ C6 H62 SING N N 31 RNQ C6 H61 SING N N 32 RNQ O6 HO6 SING N N 33 RNQ C4 H4 SING N N 34 RNQ O4 HO4 SING N N 35 RNQ C3 H3 SING N N 36 RNQ C2 H2 SING N N 37 RNQ O2 HO2 SING N N 38 RNQ C11 H11 SING N N 39 RNQ O1 HO1 SING N N 40 RNQ C51 H51 SING N N 41 RNQ C61 H611 SING N N 42 RNQ C61 H621 SING N N 43 RNQ O61 HO61 SING N N 44 RNQ C41 H41 SING N N 45 RNQ C31 H31 SING N N 46 RNQ O31 HO31 SING N N 47 RNQ C21 H21 SING N N 48 RNQ N2 HN2 SING N N 49 RNQ C8 H83 SING N N 50 RNQ C8 H82 SING N N 51 RNQ C8 H81 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RNQ InChI InChI 1.03 "InChI=1S/C14H25NO11/c1-4(18)15-7-9(20)12(6(3-17)24-13(7)23)26-14-11(22)10(21)8(19)5(2-16)25-14/h5-14,16-17,19-23H,2-3H2,1H3,(H,15,18)/t5-,6-,7-,8+,9-,10+,11-,12-,13-,14+/m1/s1" RNQ InChIKey InChI 1.03 KFEUJDWYNGMDBV-LODBTCKLSA-N RNQ SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@H]1[C@H](O)O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O)[C@H](O)[C@H]2O)[C@@H]1O" RNQ SMILES CACTVS 3.385 "CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O)[CH]1O" RNQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)O" RNQ SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(C(C(OC1O)CO)OC2C(C(C(C(O2)CO)O)O)O)O" # _pdbx_chem_comp_identifier.comp_id RNQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-5-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-2,4-bis(oxidanyl)oxan-3-yl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RNQ "Create component" 2020-10-12 PDBE RNQ "Initial release" 2025-11-12 RCSB #