data_RNZ # _chem_comp.id RNZ _chem_comp.name "2,2-dimethylpropyl-[(2~{R},3~{S})-3-(2,2-diphenylethanoylamino)-2-oxidanyl-4-phenyl-butyl]azanium" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H37 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2020-10-14 _chem_comp.pdbx_modified_date 2021-05-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 445.616 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RNZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AMZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RNZ C10 C1 C 0 1 Y N N 15.428 43.009 37.786 -1.274 4.378 -0.758 C10 RNZ 1 RNZ C17 C2 C 0 1 N N N 21.043 37.214 39.766 7.054 -0.363 -0.539 C17 RNZ 2 RNZ C20 C3 C 0 1 N N N 19.781 36.949 40.575 6.860 -1.691 -1.274 C20 RNZ 3 RNZ C21 C4 C 0 1 N N N 18.135 40.574 41.763 -2.578 -0.783 0.659 C21 RNZ 4 RNZ C22 C5 C 0 1 Y N N 16.517 40.207 41.763 -3.824 -0.361 -0.077 C22 RNZ 5 RNZ C24 C6 C 0 1 Y N N 14.138 40.596 41.069 -6.083 0.431 -0.044 C24 RNZ 6 RNZ C26 C7 C 0 1 Y N N 14.638 38.729 42.482 -4.991 0.014 -2.133 C26 RNZ 7 RNZ C28 C8 C 0 1 Y N N 18.489 41.907 42.497 -2.324 -2.248 0.417 C28 RNZ 8 RNZ C02 C9 C 0 1 N N N 18.632 40.766 40.339 -1.404 0.020 0.159 C02 RNZ 9 RNZ C04 C10 C 0 1 N N S 19.832 42.114 38.486 0.965 0.591 0.191 C04 RNZ 10 RNZ C05 C11 C 0 1 N N N 19.268 43.443 37.880 1.032 1.921 0.946 C05 RNZ 11 RNZ C06 C12 C 0 1 Y N N 17.773 43.648 38.153 -0.184 2.747 0.616 C06 RNZ 12 RNZ C07 C13 C 0 1 Y N N 17.297 44.590 39.072 -1.327 2.634 1.387 C07 RNZ 13 RNZ C08 C14 C 0 1 Y N N 15.926 44.752 39.333 -2.441 3.395 1.087 C08 RNZ 14 RNZ C09 C15 C 0 1 Y N N 14.976 43.970 38.691 -2.416 4.263 0.012 C09 RNZ 15 RNZ C11 C16 C 0 1 Y N N 16.800 42.850 37.533 -0.158 3.620 -0.456 C11 RNZ 16 RNZ C12 C17 C 0 1 N N R 21.376 42.007 38.382 2.256 -0.194 0.427 C12 RNZ 17 RNZ C14 C18 C 0 1 N N N 21.900 40.994 39.511 3.433 0.563 -0.191 C14 RNZ 18 RNZ C16 C19 C 0 1 N N N 20.871 38.682 39.164 5.784 0.480 -0.665 C16 RNZ 19 RNZ C18 C20 C 0 1 N N N 21.147 36.180 38.636 7.342 -0.635 0.938 C18 RNZ 20 RNZ C19 C21 C 0 1 N N N 22.216 37.084 40.694 8.232 0.394 -1.157 C19 RNZ 21 RNZ C23 C22 C 0 1 Y N N 15.507 40.945 41.051 -4.940 0.044 0.631 C23 RNZ 22 RNZ C25 C23 C 0 1 Y N N 13.691 39.471 41.797 -6.109 0.414 -1.426 C25 RNZ 23 RNZ C27 C24 C 0 1 Y N N 16.006 39.085 42.456 -3.848 -0.373 -1.459 C27 RNZ 24 RNZ C29 C25 C 0 1 Y N N 17.701 43.081 42.427 -1.946 -2.687 -0.838 C29 RNZ 25 RNZ C30 C26 C 0 1 Y N N 18.060 44.272 43.078 -1.713 -4.031 -1.060 C30 RNZ 26 RNZ C31 C27 C 0 1 Y N N 19.242 44.323 43.820 -1.858 -4.937 -0.026 C31 RNZ 27 RNZ C32 C28 C 0 1 Y N N 20.052 43.182 43.890 -2.235 -4.499 1.230 C32 RNZ 28 RNZ C33 C29 C 0 1 Y N N 19.678 42.002 43.226 -2.463 -3.154 1.452 C33 RNZ 29 RNZ N03 N1 N 0 1 N N N 19.428 41.892 39.908 -0.177 -0.188 0.677 N03 RNZ 30 RNZ N15 N2 N 1 1 N N N 22.074 39.512 39.043 4.653 -0.247 -0.071 N15 RNZ 31 RNZ O01 O1 O 0 1 N N N 18.290 39.926 39.491 -1.563 0.852 -0.708 O01 RNZ 32 RNZ O13 O2 O 0 1 N N N 21.622 41.442 37.141 2.472 -0.346 1.831 O13 RNZ 33 RNZ H1 H1 H 0 1 N N N 14.714 42.380 37.274 -1.255 5.056 -1.598 H1 RNZ 34 RNZ H2 H2 H 0 1 N N N 19.703 37.688 41.386 7.765 -2.292 -1.185 H2 RNZ 35 RNZ H3 H3 H 0 1 N N N 18.902 37.030 39.919 6.021 -2.230 -0.834 H3 RNZ 36 RNZ H4 H4 H 0 1 N N N 19.826 35.937 41.004 6.655 -1.497 -2.327 H4 RNZ 37 RNZ H5 H5 H 0 1 N N N 18.675 39.742 42.239 -2.709 -0.608 1.727 H5 RNZ 38 RNZ H6 H6 H 0 1 N N N 13.426 41.195 40.521 -6.957 0.744 0.509 H6 RNZ 39 RNZ H7 H7 H 0 1 N N N 14.326 37.863 43.046 -5.011 0.000 -3.213 H7 RNZ 40 RNZ H8 H8 H 0 1 N N N 19.413 41.290 37.889 0.846 0.784 -0.875 H8 RNZ 41 RNZ H9 H9 H 0 1 N N N 19.425 43.424 36.791 1.061 1.729 2.018 H9 RNZ 42 RNZ H10 H10 H 0 1 N N N 19.821 44.288 38.316 1.930 2.462 0.649 H10 RNZ 43 RNZ H11 H11 H 0 1 N N N 18.006 45.212 39.597 -1.347 1.952 2.224 H11 RNZ 44 RNZ H12 H12 H 0 1 N N N 15.606 45.498 40.045 -3.333 3.306 1.689 H12 RNZ 45 RNZ H13 H13 H 0 1 N N N 13.922 44.101 38.885 -3.290 4.852 -0.227 H13 RNZ 46 RNZ H14 H14 H 0 1 N N N 17.117 42.087 36.837 0.735 3.709 -1.057 H14 RNZ 47 RNZ H15 H15 H 0 1 N N N 21.845 42.993 38.513 2.173 -1.177 -0.037 H15 RNZ 48 RNZ H16 H16 H 0 1 N N N 22.876 41.356 39.867 3.228 0.757 -1.244 H16 RNZ 49 RNZ H17 H17 H 0 1 N N N 21.179 41.007 40.342 3.572 1.509 0.332 H17 RNZ 50 RNZ H18 H18 H 0 1 N N N 20.163 39.222 39.810 5.922 1.426 -0.141 H18 RNZ 51 RNZ H19 H19 H 0 1 N N N 20.442 38.576 38.157 5.579 0.674 -1.717 H19 RNZ 52 RNZ H20 H20 H 0 1 N N N 21.265 35.175 39.068 8.248 -1.236 1.028 H20 RNZ 53 RNZ H21 H21 H 0 1 N N N 20.233 36.212 38.025 7.481 0.311 1.462 H21 RNZ 54 RNZ H22 H22 H 0 1 N N N 22.018 36.413 38.005 6.503 -1.174 1.379 H22 RNZ 55 RNZ H23 H23 H 0 1 N N N 22.132 37.829 41.499 8.026 0.587 -2.210 H23 RNZ 56 RNZ H24 H24 H 0 1 N N N 22.229 36.074 41.129 8.370 1.340 -0.634 H24 RNZ 57 RNZ H25 H25 H 0 1 N N N 23.147 37.254 40.134 9.137 -0.207 -1.068 H25 RNZ 58 RNZ H26 H26 H 0 1 N N N 15.810 41.807 40.475 -4.920 0.058 1.710 H26 RNZ 59 RNZ H27 H27 H 0 1 N N N 12.646 39.199 41.818 -7.003 0.712 -1.953 H27 RNZ 60 RNZ H28 H28 H 0 1 N N N 16.703 38.463 42.998 -2.974 -0.685 -2.012 H28 RNZ 61 RNZ H29 H29 H 0 1 N N N 16.788 43.060 41.850 -1.833 -1.979 -1.646 H29 RNZ 62 RNZ H30 H30 H 0 1 N N N 17.426 45.143 43.005 -1.419 -4.374 -2.041 H30 RNZ 63 RNZ H31 H31 H 0 1 N N N 19.528 45.230 44.333 -1.677 -5.988 -0.199 H31 RNZ 64 RNZ H32 H32 H 0 1 N N N 20.970 43.210 44.458 -2.348 -5.207 2.038 H32 RNZ 65 RNZ H33 H33 H 0 1 N N N 20.329 41.142 43.280 -2.754 -2.811 2.434 H33 RNZ 66 RNZ H34 H34 H 0 1 N N N 19.723 42.556 40.595 -0.049 -0.854 1.371 H34 RNZ 67 RNZ H35 H35 H 0 1 N N N 22.796 39.095 39.594 4.843 -0.426 0.903 H35 RNZ 68 RNZ H36 H36 H 0 1 N N N 22.351 39.520 38.082 4.525 -1.123 -0.555 H36 RNZ 69 RNZ H37 H37 H 0 1 N N N 22.559 41.349 37.015 2.556 0.490 2.309 H37 RNZ 70 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RNZ O13 C12 SING N N 1 RNZ C11 C10 DOUB Y N 2 RNZ C11 C06 SING Y N 3 RNZ C10 C09 SING Y N 4 RNZ C05 C06 SING N N 5 RNZ C05 C04 SING N N 6 RNZ C06 C07 DOUB Y N 7 RNZ C12 C04 SING N N 8 RNZ C12 C14 SING N N 9 RNZ C04 N03 SING N N 10 RNZ C18 C17 SING N N 11 RNZ C09 C08 DOUB Y N 12 RNZ N15 C16 SING N N 13 RNZ N15 C14 SING N N 14 RNZ C07 C08 SING Y N 15 RNZ C16 C17 SING N N 16 RNZ O01 C02 DOUB N N 17 RNZ C17 C20 SING N N 18 RNZ C17 C19 SING N N 19 RNZ N03 C02 SING N N 20 RNZ C02 C21 SING N N 21 RNZ C23 C24 DOUB Y N 22 RNZ C23 C22 SING Y N 23 RNZ C24 C25 SING Y N 24 RNZ C22 C21 SING N N 25 RNZ C22 C27 DOUB Y N 26 RNZ C21 C28 SING N N 27 RNZ C25 C26 DOUB Y N 28 RNZ C29 C28 DOUB Y N 29 RNZ C29 C30 SING Y N 30 RNZ C27 C26 SING Y N 31 RNZ C28 C33 SING Y N 32 RNZ C30 C31 DOUB Y N 33 RNZ C33 C32 DOUB Y N 34 RNZ C31 C32 SING Y N 35 RNZ C10 H1 SING N N 36 RNZ C20 H2 SING N N 37 RNZ C20 H3 SING N N 38 RNZ C20 H4 SING N N 39 RNZ C21 H5 SING N N 40 RNZ C24 H6 SING N N 41 RNZ C26 H7 SING N N 42 RNZ C04 H8 SING N N 43 RNZ C05 H9 SING N N 44 RNZ C05 H10 SING N N 45 RNZ C07 H11 SING N N 46 RNZ C08 H12 SING N N 47 RNZ C09 H13 SING N N 48 RNZ C11 H14 SING N N 49 RNZ C12 H15 SING N N 50 RNZ C14 H16 SING N N 51 RNZ C14 H17 SING N N 52 RNZ C16 H18 SING N N 53 RNZ C16 H19 SING N N 54 RNZ C18 H20 SING N N 55 RNZ C18 H21 SING N N 56 RNZ C18 H22 SING N N 57 RNZ C19 H23 SING N N 58 RNZ C19 H24 SING N N 59 RNZ C19 H25 SING N N 60 RNZ C23 H26 SING N N 61 RNZ C25 H27 SING N N 62 RNZ C27 H28 SING N N 63 RNZ C29 H29 SING N N 64 RNZ C30 H30 SING N N 65 RNZ C31 H31 SING N N 66 RNZ C32 H32 SING N N 67 RNZ C33 H33 SING N N 68 RNZ N03 H34 SING N N 69 RNZ N15 H35 SING N N 70 RNZ N15 H36 SING N N 71 RNZ O13 H37 SING N N 72 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RNZ InChI InChI 1.03 "InChI=1S/C29H36N2O2/c1-29(2,3)21-30-20-26(32)25(19-22-13-7-4-8-14-22)31-28(33)27(23-15-9-5-10-16-23)24-17-11-6-12-18-24/h4-18,25-27,30,32H,19-21H2,1-3H3,(H,31,33)/p+1/t25-,26+/m0/s1" RNZ InChIKey InChI 1.03 SGKQSSMGZUXLMP-IZZNHLLZSA-O RNZ SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)C[NH2+]C[C@@H](O)[C@H](Cc1ccccc1)NC(=O)C(c2ccccc2)c3ccccc3" RNZ SMILES CACTVS 3.385 "CC(C)(C)C[NH2+]C[CH](O)[CH](Cc1ccccc1)NC(=O)C(c2ccccc2)c3ccccc3" RNZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C)C[NH2+]C[C@H]([C@H](Cc1ccccc1)NC(=O)C(c2ccccc2)c3ccccc3)O" RNZ SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C)C[NH2+]CC(C(Cc1ccccc1)NC(=O)C(c2ccccc2)c3ccccc3)O" # _pdbx_chem_comp_identifier.comp_id RNZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2,2-dimethylpropyl-[(2~{R},3~{S})-3-(2,2-diphenylethanoylamino)-2-oxidanyl-4-phenyl-butyl]azanium" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RNZ "Create component" 2020-10-14 PDBE RNZ "Initial release" 2021-05-26 RCSB ##