data_RR9 # _chem_comp.id RR9 _chem_comp.name "6-[[[2-[[(2~{R})-1-oxidanylbutan-2-yl]amino]-9-propan-2-yl-purin-6-yl]amino]methyl]-3-pyridin-2-yl-1~{H}-pyridin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H28 N8 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-06 _chem_comp.pdbx_modified_date 2023-09-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 448.521 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RR9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BUH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RR9 C1 C1 C 0 1 N N N -60.697 24.527 -11.232 -5.722 -4.036 1.209 C1 RR9 1 RR9 N1 N1 N 0 1 Y N N -61.791 24.826 -9.046 -4.083 -2.773 -0.094 N1 RR9 2 RR9 O1 O1 O 0 1 N N N -66.635 23.148 -1.082 4.438 -0.698 1.878 O1 RR9 3 RR9 C2 C2 C 0 1 N N N -60.940 25.471 -10.068 -5.475 -3.227 -0.066 C2 RR9 4 RR9 N2 N2 N 0 1 Y N N -63.601 23.936 -8.043 -1.901 -2.832 -0.126 N2 RR9 5 RR9 O2 O2 O 0 1 N N N -56.864 22.858 -3.755 -5.438 4.660 -0.017 O2 RR9 6 RR9 C3 C3 C 0 1 N N N -61.558 26.780 -10.501 -5.750 -4.106 -1.288 C3 RR9 7 RR9 C4 C4 C 0 1 Y N N -63.124 24.521 -9.118 -2.974 -3.567 -0.090 C4 RR9 8 RR9 C5 C5 C 0 1 Y N N -61.373 24.364 -7.825 -3.655 -1.470 -0.135 C5 RR9 9 RR9 C7 C6 C 0 1 Y N N -62.286 23.283 -5.935 -1.539 -0.312 -0.189 C7 RR9 10 RR9 C9 C7 C 0 1 N N N -63.612 22.886 -2.828 2.054 0.697 -0.208 C9 RR9 11 RR9 C10 C8 C 0 1 N N N -62.835 23.811 -2.221 2.796 1.051 -1.286 C10 RR9 12 RR9 C11 C9 C 0 1 N N N -63.339 24.571 -1.158 4.172 0.802 -1.302 C11 RR9 13 RR9 C12 C10 C 0 1 N N N -64.646 24.397 -0.724 4.758 0.192 -0.203 C12 RR9 14 RR9 C14 C11 C 0 1 Y N N -64.397 25.719 1.410 6.978 0.157 -1.325 C14 RR9 15 RR9 C15 C12 C 0 1 Y N N -64.970 26.480 2.406 8.335 -0.108 -1.292 C15 RR9 16 RR9 C16 C13 C 0 1 Y N N -66.318 26.735 2.361 8.883 -0.617 -0.122 C16 RR9 17 RR9 C17 C14 C 0 1 Y N N -67.046 26.220 1.315 8.065 -0.841 0.969 C17 RR9 18 RR9 C18 C15 C 0 1 N N N -65.466 23.402 -1.380 3.944 -0.160 0.901 C18 RR9 19 RR9 C21 C16 C 0 1 N N N -57.997 23.538 -3.212 -4.307 4.405 -0.852 C21 RR9 20 RR9 C22 C17 C 0 1 N N N -57.628 25.729 -4.426 -3.080 3.685 1.201 C22 RR9 21 RR9 C23 C18 C 0 1 N N N -58.173 26.816 -5.325 -2.125 2.639 1.780 C23 RR9 22 RR9 C13 C19 C 0 1 Y N N -65.195 25.210 0.393 6.212 -0.088 -0.185 C13 RR9 23 RR9 C19 C20 C 0 1 Y N N -60.035 23.893 -6.089 -3.549 0.831 -0.200 C19 RR9 24 RR9 C20 C21 C 0 1 N N R -58.571 24.536 -4.219 -3.454 3.297 -0.230 C20 RR9 25 RR9 C6 C22 C 0 1 Y N N -62.492 23.831 -7.215 -2.251 -1.523 -0.149 C6 RR9 26 RR9 C8 C23 C 0 1 N N N -63.082 22.059 -3.972 0.572 0.966 -0.209 C8 RR9 27 RR9 N3 N3 N 0 1 N N N -63.285 22.718 -5.242 -0.155 -0.306 -0.191 N3 RR9 28 RR9 N4 N4 N 0 1 N N N -64.895 22.697 -2.411 2.623 0.100 0.869 N4 RR9 29 RR9 N5 N5 N 0 1 Y N N -66.515 25.475 0.334 6.774 -0.580 0.912 N5 RR9 30 RR9 N6 N6 N 0 1 Y N N -61.051 23.337 -5.394 -2.223 0.827 -0.202 N6 RR9 31 RR9 N7 N7 N 0 1 N N N -58.822 23.906 -5.514 -4.215 2.045 -0.214 N7 RR9 32 RR9 N8 N8 N 0 1 Y N N -60.135 24.432 -7.318 -4.259 -0.286 -0.161 N8 RR9 33 RR9 H2 H1 H 0 1 N N N -60.248 23.594 -10.861 -5.527 -3.410 2.080 H2 RR9 34 RR9 H3 H2 H 0 1 N N N -61.653 24.302 -11.727 -6.758 -4.374 1.230 H3 RR9 35 RR9 H1 H3 H 0 1 N N N -60.014 25.001 -11.952 -5.057 -4.900 1.226 H1 RR9 36 RR9 H4 H4 H 0 1 N N N -59.965 25.695 -9.611 -6.140 -2.364 -0.083 H4 RR9 37 RR9 H23 H5 H 0 1 N N N -56.525 22.245 -3.114 -6.025 5.353 -0.351 H23 RR9 38 RR9 H6 H6 H 0 1 N N N -61.711 27.422 -9.621 -5.085 -4.970 -1.271 H6 RR9 39 RR9 H7 H7 H 0 1 N N N -60.887 27.285 -11.211 -6.786 -4.444 -1.268 H7 RR9 40 RR9 H5 H8 H 0 1 N N N -62.526 26.586 -10.986 -5.574 -3.530 -2.197 H5 RR9 41 RR9 H8 H9 H 0 1 N N N -63.731 24.742 -9.984 -2.985 -4.647 -0.061 H8 RR9 42 RR9 H13 H10 H 0 1 N N N -61.820 23.965 -2.558 2.323 1.525 -2.133 H13 RR9 43 RR9 H14 H11 H 0 1 N N N -62.706 25.298 -0.672 4.768 1.080 -2.158 H14 RR9 44 RR9 H15 H12 H 0 1 N N N -63.336 25.520 1.420 6.519 0.554 -2.219 H15 RR9 45 RR9 H16 H13 H 0 1 N N N -64.366 26.871 3.212 8.955 0.075 -2.158 H16 RR9 46 RR9 H17 H14 H 0 1 N N N -66.795 27.326 3.129 9.939 -0.835 -0.065 H17 RR9 47 RR9 H18 H15 H 0 1 N N N -68.105 26.427 1.281 8.489 -1.237 1.880 H18 RR9 48 RR9 H21 H16 H 0 1 N N N -57.691 24.079 -2.304 -4.648 4.090 -1.839 H21 RR9 49 RR9 H22 H17 H 0 1 N N N -58.771 22.800 -2.956 -3.712 5.313 -0.946 H22 RR9 50 RR9 H25 H18 H 0 1 N N N -56.693 25.354 -4.869 -3.981 3.733 1.812 H25 RR9 51 RR9 H24 H19 H 0 1 N N N -57.415 26.173 -3.442 -2.592 4.660 1.198 H24 RR9 52 RR9 H27 H20 H 0 1 N N N -57.432 27.625 -5.414 -2.613 1.665 1.784 H27 RR9 53 RR9 H28 H21 H 0 1 N N N -58.381 26.398 -6.321 -1.224 2.592 1.169 H28 RR9 54 RR9 H26 H22 H 0 1 N N N -59.103 27.216 -4.894 -1.859 2.916 2.800 H26 RR9 55 RR9 H20 H23 H 0 1 N N N -59.521 24.919 -3.817 -2.547 3.163 -0.820 H20 RR9 56 RR9 H10 H24 H 0 1 N N N -63.604 21.091 -3.985 0.307 1.547 0.675 H10 RR9 57 RR9 H11 H25 H 0 1 N N N -62.005 21.893 -3.824 0.304 1.525 -1.105 H11 RR9 58 RR9 H9 H26 H 0 1 N N N -63.950 23.446 -5.073 0.333 -1.144 -0.182 H9 RR9 59 RR9 H12 H27 H 0 1 N N N -65.450 22.009 -2.880 2.070 -0.143 1.628 H12 RR9 60 RR9 H19 H28 H 0 1 N N N -58.553 22.948 -5.413 -5.185 2.067 -0.213 H19 RR9 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RR9 C1 C2 SING N N 1 RR9 C3 C2 SING N N 2 RR9 C2 N1 SING N N 3 RR9 C4 N1 SING Y N 4 RR9 C4 N2 DOUB Y N 5 RR9 N1 C5 SING Y N 6 RR9 N2 C6 SING Y N 7 RR9 C5 N8 DOUB Y N 8 RR9 C5 C6 SING Y N 9 RR9 N8 C19 SING Y N 10 RR9 C6 C7 DOUB Y N 11 RR9 C19 N7 SING N N 12 RR9 C19 N6 DOUB Y N 13 RR9 C7 N6 SING Y N 14 RR9 C7 N3 SING N N 15 RR9 N7 C20 SING N N 16 RR9 C23 C22 SING N N 17 RR9 N3 C8 SING N N 18 RR9 C22 C20 SING N N 19 RR9 C20 C21 SING N N 20 RR9 C8 C9 SING N N 21 RR9 O2 C21 SING N N 22 RR9 C9 N4 SING N N 23 RR9 C9 C10 DOUB N N 24 RR9 N4 C18 SING N N 25 RR9 C10 C11 SING N N 26 RR9 C18 O1 DOUB N N 27 RR9 C18 C12 SING N N 28 RR9 C11 C12 DOUB N N 29 RR9 C12 C13 SING N N 30 RR9 N5 C13 DOUB Y N 31 RR9 N5 C17 SING Y N 32 RR9 C13 C14 SING Y N 33 RR9 C17 C16 DOUB Y N 34 RR9 C14 C15 DOUB Y N 35 RR9 C16 C15 SING Y N 36 RR9 C1 H2 SING N N 37 RR9 C1 H3 SING N N 38 RR9 C1 H1 SING N N 39 RR9 C2 H4 SING N N 40 RR9 O2 H23 SING N N 41 RR9 C3 H6 SING N N 42 RR9 C3 H7 SING N N 43 RR9 C3 H5 SING N N 44 RR9 C4 H8 SING N N 45 RR9 C10 H13 SING N N 46 RR9 C11 H14 SING N N 47 RR9 C14 H15 SING N N 48 RR9 C15 H16 SING N N 49 RR9 C16 H17 SING N N 50 RR9 C17 H18 SING N N 51 RR9 C21 H21 SING N N 52 RR9 C21 H22 SING N N 53 RR9 C22 H25 SING N N 54 RR9 C22 H24 SING N N 55 RR9 C23 H27 SING N N 56 RR9 C23 H28 SING N N 57 RR9 C23 H26 SING N N 58 RR9 C20 H20 SING N N 59 RR9 C8 H10 SING N N 60 RR9 C8 H11 SING N N 61 RR9 N3 H9 SING N N 62 RR9 N4 H12 SING N N 63 RR9 N7 H19 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RR9 InChI InChI 1.06 "InChI=1S/C23H28N8O2/c1-4-15(12-32)28-23-29-20(19-21(30-23)31(13-26-19)14(2)3)25-11-16-8-9-17(22(33)27-16)18-7-5-6-10-24-18/h5-10,13-15,32H,4,11-12H2,1-3H3,(H,27,33)(H2,25,28,29,30)/t15-/m1/s1" RR9 InChIKey InChI 1.06 ZZMGLCCXIBNSGN-OAHLLOKOSA-N RR9 SMILES_CANONICAL CACTVS 3.385 "CC[C@H](CO)Nc1nc(NCC2=CC=C(C(=O)N2)c3ccccn3)c4ncn(C(C)C)c4n1" RR9 SMILES CACTVS 3.385 "CC[CH](CO)Nc1nc(NCC2=CC=C(C(=O)N2)c3ccccn3)c4ncn(C(C)C)c4n1" RR9 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC[C@H](CO)Nc1nc(c2c(n1)n(cn2)C(C)C)NCC3=CC=C(C(=O)N3)c4ccccn4" RR9 SMILES "OpenEye OEToolkits" 3.1.0.0 "CCC(CO)Nc1nc(c2c(n1)n(cn2)C(C)C)NCC3=CC=C(C(=O)N3)c4ccccn4" # _pdbx_chem_comp_identifier.comp_id RR9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "6-[[[2-[[(2~{R})-1-oxidanylbutan-2-yl]amino]-9-propan-2-yl-purin-6-yl]amino]methyl]-3-pyridin-2-yl-1~{H}-pyridin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RR9 "Create component" 2022-12-06 PDBE RR9 "Other modification" 2023-09-08 PDBE RR9 "Initial release" 2023-09-13 RCSB #