data_RT2 # _chem_comp.id RT2 _chem_comp.name Tofogliflozin _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H26 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-20 _chem_comp.pdbx_modified_date 2020-11-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 386.438 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RT2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7APH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RT2 C10 C1 C 0 1 Y N N 8.632 2.596 -19.097 1.457 1.962 -0.470 C10 RT2 1 RT2 C13 C2 C 0 1 Y N N 11.129 3.439 -18.158 -0.566 2.080 1.408 C13 RT2 2 RT2 C17 C3 C 0 1 N N S 12.712 1.152 -20.302 -3.018 1.067 -0.467 C17 RT2 3 RT2 C20 C4 C 0 1 N N R 13.882 3.468 -21.511 -2.974 -1.703 0.356 C20 RT2 4 RT2 C22 C5 C 0 1 N N N 13.962 4.529 -22.640 -2.656 -3.167 0.049 C22 RT2 5 RT2 C28 C6 C 0 1 Y N N 8.711 3.362 -17.940 1.557 2.830 0.601 C28 RT2 6 RT2 C01 C7 C 0 1 N N N 7.693 -3.109 -23.716 5.994 -2.715 1.443 C01 RT2 7 RT2 C02 C8 C 0 1 N N N 6.524 -2.156 -23.479 6.437 -2.077 0.125 C02 RT2 8 RT2 C03 C9 C 0 1 Y N N 6.746 -1.075 -22.411 5.427 -1.041 -0.296 C03 RT2 9 RT2 C04 C10 C 0 1 Y N N 6.206 0.183 -22.625 4.357 -1.403 -1.093 C04 RT2 10 RT2 C05 C11 C 0 1 Y N N 6.371 1.180 -21.685 3.431 -0.452 -1.480 C05 RT2 11 RT2 C06 C12 C 0 1 Y N N 7.102 0.958 -20.527 3.575 0.860 -1.069 C06 RT2 12 RT2 C07 C13 C 0 1 Y N N 7.665 -0.298 -20.315 4.645 1.222 -0.273 C07 RT2 13 RT2 C08 C14 C 0 1 Y N N 7.473 -1.315 -21.248 5.568 0.270 0.118 C08 RT2 14 RT2 C09 C15 C 0 1 N N N 7.239 2.137 -19.546 2.565 1.896 -1.491 C09 RT2 15 RT2 C11 C16 C 0 1 Y N N 9.799 2.283 -19.781 0.345 1.151 -0.604 C11 RT2 16 RT2 C12 C17 C 0 1 Y N N 11.061 2.707 -19.273 -0.665 1.208 0.334 C12 RT2 17 RT2 C14 C18 C 0 1 N N N 12.615 3.719 -17.910 -1.816 1.911 2.240 C14 RT2 18 RT2 O15 O1 O 0 1 N N N 13.304 2.700 -18.624 -2.390 0.651 1.840 O15 RT2 19 RT2 C16 C19 C 0 1 N N S 12.500 2.516 -19.781 -1.974 0.472 0.477 C16 RT2 20 RT2 C18 C20 C 0 1 N N S 14.083 1.008 -20.983 -4.326 0.280 -0.331 C18 RT2 21 RT2 C19 C21 C 0 1 N N S 14.221 2.069 -22.093 -4.050 -1.200 -0.611 C19 RT2 22 RT2 O21 O2 O 0 1 N N N 12.549 3.440 -20.901 -1.792 -0.915 0.202 O21 RT2 23 RT2 O23 O3 O 0 1 N N N 12.896 4.358 -23.535 -1.738 -3.669 1.022 O23 RT2 24 RT2 O24 O4 O 0 1 N N N 15.543 2.092 -22.591 -5.250 -1.954 -0.424 O24 RT2 25 RT2 O25 O5 O 0 1 N N N 14.166 -0.288 -21.523 -5.282 0.776 -1.271 O25 RT2 26 RT2 O26 O6 O 0 1 N N N 11.715 0.858 -21.253 -2.547 0.983 -1.813 O26 RT2 27 RT2 C27 C22 C 0 1 Y N N 9.941 3.773 -17.451 0.541 2.892 1.538 C27 RT2 28 RT2 H171 H1 H 0 0 N N N 12.662 0.436 -19.469 -3.192 2.111 -0.206 H171 RT2 29 RT2 H201 H2 H 0 0 N N N 14.632 3.717 -20.746 -3.338 -1.617 1.380 H201 RT2 30 RT2 H222 H3 H 0 0 N N N 14.913 4.415 -23.180 -3.574 -3.753 0.080 H222 RT2 31 RT2 H221 H4 H 0 0 N N N 13.909 5.535 -22.199 -2.210 -3.242 -0.943 H221 RT2 32 RT2 H281 H5 H 0 0 N N N 7.807 3.639 -17.418 2.428 3.459 0.707 H281 RT2 33 RT2 H011 H6 H 0 0 N N N 7.422 -3.835 -24.496 6.724 -3.465 1.747 H011 RT2 34 RT2 H012 H7 H 0 0 N N N 8.574 -2.535 -24.039 5.919 -1.947 2.212 H012 RT2 35 RT2 H013 H8 H 0 0 N N N 7.925 -3.643 -22.783 5.022 -3.190 1.308 H013 RT2 36 RT2 H021 H9 H 0 0 N N N 6.304 -1.650 -24.430 7.410 -1.603 0.260 H021 RT2 37 RT2 H022 H10 H 0 0 N N N 5.655 -2.758 -23.174 6.512 -2.846 -0.645 H022 RT2 38 RT2 H041 H11 H 0 0 N N N 5.654 0.384 -23.531 4.245 -2.428 -1.414 H041 RT2 39 RT2 H051 H12 H 0 0 N N N 5.924 2.149 -21.854 2.595 -0.735 -2.103 H051 RT2 40 RT2 H071 H13 H 0 0 N N N 8.251 -0.484 -19.427 4.757 2.247 0.048 H071 RT2 41 RT2 H081 H14 H 0 0 N N N 7.890 -2.295 -21.068 6.402 0.552 0.744 H081 RT2 42 RT2 H092 H15 H 0 0 N N N 6.755 3.004 -20.020 2.149 1.625 -2.461 H092 RT2 43 RT2 H091 H16 H 0 0 N N N 6.686 1.860 -18.636 3.051 2.869 -1.563 H091 RT2 44 RT2 H111 H17 H 0 0 N N N 9.750 1.717 -20.700 0.268 0.474 -1.441 H111 RT2 45 RT2 H141 H18 H 0 0 N N N 12.845 3.662 -16.836 -1.563 1.894 3.300 H141 RT2 46 RT2 H142 H19 H 0 0 N N N 12.890 4.713 -18.292 -2.516 2.721 2.034 H142 RT2 47 RT2 H181 H20 H 0 0 N N N 14.873 1.171 -20.235 -4.717 0.394 0.680 H181 RT2 48 RT2 H191 H21 H 0 0 N N N 13.507 1.838 -22.897 -3.701 -1.318 -1.637 H191 RT2 49 RT2 H231 H22 H 0 0 N N N 12.952 5.011 -24.223 -1.491 -4.595 0.889 H231 RT2 50 RT2 H241 H23 H 0 0 N N N 15.761 1.240 -22.950 -5.147 -2.902 -0.581 H241 RT2 51 RT2 H251 H24 H 0 0 N N N 14.079 -0.928 -20.826 -6.135 0.322 -1.241 H251 RT2 52 RT2 H261 H25 H 0 0 N N N 10.858 0.942 -20.851 -3.161 1.343 -2.468 H261 RT2 53 RT2 H271 H26 H 0 0 N N N 9.997 4.345 -16.536 0.619 3.570 2.375 H271 RT2 54 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RT2 C01 C02 SING N N 1 RT2 O23 C22 SING N N 2 RT2 C02 C03 SING N N 3 RT2 C22 C20 SING N N 4 RT2 C04 C03 DOUB Y N 5 RT2 C04 C05 SING Y N 6 RT2 O24 C19 SING N N 7 RT2 C03 C08 SING Y N 8 RT2 C19 C20 SING N N 9 RT2 C19 C18 SING N N 10 RT2 C05 C06 DOUB Y N 11 RT2 O25 C18 SING N N 12 RT2 C20 O21 SING N N 13 RT2 O26 C17 SING N N 14 RT2 C08 C07 DOUB Y N 15 RT2 C18 C17 SING N N 16 RT2 O21 C16 SING N N 17 RT2 C06 C07 SING Y N 18 RT2 C06 C09 SING N N 19 RT2 C17 C16 SING N N 20 RT2 C16 C12 SING N N 21 RT2 C16 O15 SING N N 22 RT2 C11 C12 DOUB Y N 23 RT2 C11 C10 SING Y N 24 RT2 C09 C10 SING N N 25 RT2 C12 C13 SING Y N 26 RT2 C10 C28 DOUB Y N 27 RT2 O15 C14 SING N N 28 RT2 C13 C14 SING N N 29 RT2 C13 C27 DOUB Y N 30 RT2 C28 C27 SING Y N 31 RT2 C17 H171 SING N N 32 RT2 C20 H201 SING N N 33 RT2 C22 H222 SING N N 34 RT2 C22 H221 SING N N 35 RT2 C28 H281 SING N N 36 RT2 C01 H011 SING N N 37 RT2 C01 H012 SING N N 38 RT2 C01 H013 SING N N 39 RT2 C02 H021 SING N N 40 RT2 C02 H022 SING N N 41 RT2 C04 H041 SING N N 42 RT2 C05 H051 SING N N 43 RT2 C07 H071 SING N N 44 RT2 C08 H081 SING N N 45 RT2 C09 H092 SING N N 46 RT2 C09 H091 SING N N 47 RT2 C11 H111 SING N N 48 RT2 C14 H141 SING N N 49 RT2 C14 H142 SING N N 50 RT2 C18 H181 SING N N 51 RT2 C19 H191 SING N N 52 RT2 O23 H231 SING N N 53 RT2 O24 H241 SING N N 54 RT2 O25 H251 SING N N 55 RT2 O26 H261 SING N N 56 RT2 C27 H271 SING N N 57 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RT2 InChI InChI 1.03 "InChI=1S/C22H26O6/c1-2-13-3-5-14(6-4-13)9-15-7-8-16-12-27-22(17(16)10-15)21(26)20(25)19(24)18(11-23)28-22/h3-8,10,18-21,23-26H,2,9,11-12H2,1H3/t18-,19-,20+,21+,22+/m1/s1" RT2 InChIKey InChI 1.03 VWVKUNOPTJGDOB-AANPDWTMSA-N RT2 SMILES_CANONICAL CACTVS 3.385 "CCc1ccc(Cc2ccc3CO[C@]4(O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]4O)c3c2)cc1" RT2 SMILES CACTVS 3.385 "CCc1ccc(Cc2ccc3CO[C]4(O[CH](CO)[CH](O)[CH](O)[CH]4O)c3c2)cc1" RT2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCc1ccc(cc1)Cc2ccc3c(c2)[C@]4([C@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)OC3" RT2 SMILES "OpenEye OEToolkits" 2.0.7 "CCc1ccc(cc1)Cc2ccc3c(c2)C4(C(C(C(C(O4)CO)O)O)O)OC3" # _pdbx_chem_comp_identifier.comp_id RT2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S},3'~{S},4'~{S},5'~{S},6'~{R})-5-[(4-ethylphenyl)methyl]-6'-(hydroxymethyl)spiro[1~{H}-2-benzofuran-3,2'-oxane]-3',4',5'-triol" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RT2 "Create component" 2020-10-20 PDBE RT2 "Initial release" 2020-12-02 RCSB ##