data_RTB # _chem_comp.id RTB _chem_comp.name ;(2,2':6',2'-TERPYRIDINE)-(1,10-PHENANTHROLINE) RUTHENIUM (II) ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H19 N5 Ru" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 2 _chem_comp.pdbx_initial_date 2001-10-03 _chem_comp.pdbx_modified_date 2023-09-23 _chem_comp.pdbx_ambiguous_flag Y _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 514.543 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RTB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 1JZF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RTB RU RU RU 2 0 N N N 18.850 10.529 17.686 ? ? ? RU RTB 1 RTB N2 N2 N 0 1 Y N N 20.533 10.470 18.711 ? ? ? N2 RTB 2 RTB N3 N3 N 0 1 Y N N 18.999 8.678 17.041 ? ? ? N3 RTB 3 RTB N4 N4 N 0 1 Y N N 18.797 12.431 18.364 ? ? ? N4 RTB 4 RTB N5 N5 N 0 1 Y N N 19.984 10.821 16.046 ? ? ? N5 RTB 5 RTB N6 N6 N 0 1 Y N N 17.779 9.606 19.099 ? ? ? N6 RTB 6 RTB C7 C7 C 0 1 Y N N 21.343 9.391 18.825 ? ? ? C7 RTB 7 RTB C8 C8 C 0 1 Y N N 22.497 9.426 19.558 ? ? ? C8 RTB 8 RTB C9 C9 C 0 1 Y N N 22.837 10.625 20.202 ? ? ? C9 RTB 9 RTB C10 C10 C 0 1 Y N N 22.001 11.717 20.082 ? ? ? C10 RTB 10 RTB C11 C11 C 0 1 Y N N 20.856 11.606 19.323 ? ? ? C11 RTB 11 RTB C12 C12 C 0 1 Y N N 19.707 8.429 15.921 ? ? ? C12 RTB 12 RTB C13 C13 C 0 1 Y N N 19.826 7.137 15.454 ? ? ? C13 RTB 13 RTB C14 C14 C 0 1 Y N N 19.205 6.117 16.160 ? ? ? C14 RTB 14 RTB C15 C15 C 0 1 Y N N 18.465 6.389 17.335 ? ? ? C15 RTB 15 RTB C16 C16 C 0 1 Y N N 18.402 7.727 17.736 ? ? ? C16 RTB 16 RTB C17 C17 C 0 1 Y N N 17.916 13.421 18.198 ? ? ? C17 RTB 17 RTB C18 C18 C 0 1 Y N N 18.105 14.698 18.764 ? ? ? C18 RTB 18 RTB C19 C19 C 0 1 Y N N 19.213 14.935 19.532 ? ? ? C19 RTB 19 RTB C20 C20 C 0 1 Y N N 20.140 13.925 19.722 ? ? ? C20 RTB 20 RTB C21 C21 C 0 1 Y N N 19.920 12.673 19.152 ? ? ? C21 RTB 21 RTB C22 C22 C 0 1 Y N N 20.265 9.641 15.351 ? ? ? C22 RTB 22 RTB C23 C23 C 0 1 Y N N 20.470 11.986 15.561 ? ? ? C23 RTB 23 RTB C24 C24 C 0 1 Y N N 21.239 12.059 14.388 ? ? ? C24 RTB 24 RTB C25 C25 C 0 1 Y N N 21.514 10.895 13.711 ? ? ? C25 RTB 25 RTB C26 C26 C 0 1 Y N N 21.036 9.692 14.172 ? ? ? C26 RTB 26 RTB C27 C27 C 0 1 Y N N 17.680 8.243 18.924 ? ? ? C27 RTB 27 RTB C28 C28 C 0 1 Y N N 17.140 10.159 20.188 ? ? ? C28 RTB 28 RTB C29 C29 C 0 1 Y N N 16.446 9.413 21.086 ? ? ? C29 RTB 29 RTB C30 C30 C 0 1 Y N N 16.359 8.045 20.892 ? ? ? C30 RTB 30 RTB C31 C31 C 0 1 Y N N 16.989 7.453 19.814 ? ? ? C31 RTB 31 RTB C32 C32 C 0 1 Y N N 21.365 14.058 20.513 ? ? ? C32 RTB 32 RTB C33 C33 C 0 1 Y N N 22.246 13.017 20.680 ? ? ? C33 RTB 33 RTB H71 H71 H 0 1 N N N 21.070 8.475 18.322 ? ? ? H71 RTB 34 RTB H81 H81 H 0 1 N N N 23.129 8.554 19.639 ? ? ? H81 RTB 35 RTB H91 H91 H 0 1 N N N 23.743 10.693 20.786 ? ? ? H91 RTB 36 RTB H131 H131 H 0 0 N N N 20.390 6.924 14.558 ? ? ? H131 RTB 37 RTB H141 H141 H 0 0 N N N 19.288 5.100 15.807 ? ? ? H141 RTB 38 RTB H151 H151 H 0 0 N N N 17.975 5.605 17.893 ? ? ? H151 RTB 39 RTB H171 H171 H 0 0 N N N 17.029 13.237 17.610 ? ? ? H171 RTB 40 RTB H181 H181 H 0 0 N N N 17.382 15.482 18.593 ? ? ? H181 RTB 41 RTB H191 H191 H 0 0 N N N 19.363 15.903 19.986 ? ? ? H191 RTB 42 RTB H231 H231 H 0 0 N N N 20.258 12.899 16.098 ? ? ? H231 RTB 43 RTB H241 H241 H 0 0 N N N 21.606 13.008 14.026 ? ? ? H241 RTB 44 RTB H251 H251 H 0 0 N N N 22.110 10.926 12.811 ? ? ? H251 RTB 45 RTB H261 H261 H 0 0 N N N 21.252 8.783 13.630 ? ? ? H261 RTB 46 RTB H281 H281 H 0 0 N N N 17.193 11.228 20.333 ? ? ? H281 RTB 47 RTB H291 H291 H 0 0 N N N 15.970 9.879 21.936 ? ? ? H291 RTB 48 RTB H301 H301 H 0 0 N N N 15.796 7.438 21.586 ? ? ? H301 RTB 49 RTB H311 H311 H 0 0 N N N 16.940 6.384 19.672 ? ? ? H311 RTB 50 RTB H321 H321 H 0 0 N N N 21.583 15.007 20.981 ? ? ? H321 RTB 51 RTB H331 H331 H 0 0 N N N 23.139 13.169 21.268 ? ? ? H331 RTB 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RTB RU N2 SING N N 1 RTB RU N3 SING N N 2 RTB RU N4 SING N N 3 RTB RU N5 SING N N 4 RTB RU N6 SING N N 5 RTB N2 C7 SING Y N 6 RTB N2 C11 DOUB Y N 7 RTB N3 C12 SING Y N 8 RTB N3 C16 DOUB Y N 9 RTB N4 C17 SING Y N 10 RTB N4 C21 DOUB Y N 11 RTB N5 C22 DOUB Y N 12 RTB N5 C23 SING Y N 13 RTB N6 C27 SING Y N 14 RTB N6 C28 DOUB Y N 15 RTB C7 C8 DOUB Y N 16 RTB C7 H71 SING N N 17 RTB C8 C9 SING Y N 18 RTB C8 H81 SING N N 19 RTB C9 C10 DOUB Y N 20 RTB C9 H91 SING N N 21 RTB C10 C11 SING Y N 22 RTB C10 C33 SING Y N 23 RTB C11 C21 SING Y N 24 RTB C12 C13 DOUB Y N 25 RTB C12 C22 SING N N 26 RTB C13 C14 SING Y N 27 RTB C13 H131 SING N N 28 RTB C14 C15 DOUB Y N 29 RTB C14 H141 SING N N 30 RTB C15 C16 SING Y N 31 RTB C15 H151 SING N N 32 RTB C16 C27 SING N N 33 RTB C17 C18 DOUB Y N 34 RTB C17 H171 SING N N 35 RTB C18 C19 SING Y N 36 RTB C18 H181 SING N N 37 RTB C19 C20 DOUB Y N 38 RTB C19 H191 SING N N 39 RTB C20 C21 SING Y N 40 RTB C20 C32 SING Y N 41 RTB C22 C26 SING Y N 42 RTB C23 C24 DOUB Y N 43 RTB C23 H231 SING N N 44 RTB C24 C25 SING Y N 45 RTB C24 H241 SING N N 46 RTB C25 C26 DOUB Y N 47 RTB C25 H251 SING N N 48 RTB C26 H261 SING N N 49 RTB C27 C31 DOUB Y N 50 RTB C28 C29 SING Y N 51 RTB C28 H281 SING N N 52 RTB C29 C30 DOUB Y N 53 RTB C29 H291 SING N N 54 RTB C30 C31 SING Y N 55 RTB C30 H301 SING N N 56 RTB C31 H311 SING N N 57 RTB C32 C33 DOUB Y N 58 RTB C32 H321 SING N N 59 RTB C33 H331 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RTB InChI InChI 1.06 "InChI=1S/C15H11N3.C12H8N2.Ru/c1-3-10-16-12(6-1)14-8-5-9-15(18-14)13-7-2-4-11-17-13;1-3-9-5-6-10-4-2-8-14-12(10)11(9)13-7-1;/h1-11H;1-8H;/q;;+2" RTB InChIKey InChI 1.06 XMPKRNOGWDEKFE-UHFFFAOYSA-N RTB SMILES_CANONICAL CACTVS 3.385 "[Ru++].c1ccc(nc1)c2cccc(n2)c3ccccn3.c4cnc5c(c4)ccc6cccnc56" RTB SMILES CACTVS 3.385 "[Ru++].c1ccc(nc1)c2cccc(n2)c3ccccn3.c4cnc5c(c4)ccc6cccnc56" RTB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1=CC=[N]2C(=C1)C3=[N]4[Ru+2]25([N]6=C(C4=CC=C3)C=CC=C6)[N]7=C8C(=CC=C7)C=CC9=CC=C[N]5=C98" RTB SMILES "OpenEye OEToolkits" 2.0.7 "C1=CC=[N]2C(=C1)C3=[N]4[Ru+2]25([N]6=C(C4=CC=C3)C=CC=C6)[N]7=C8C(=CC=C7)C=CC9=CC=C[N]5=C98" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RTB "Create component" 2001-10-03 RCSB RTB "Modify descriptor" 2023-09-23 RCSB #