data_RTT # _chem_comp.id RTT _chem_comp.name "(2'R,5'S,12'R)-12'-cyclohexyl-2'-[2-(3,4-dimethoxyphenyl)ethyl]-3',19'-dioxa-10',13',16'-triazaspiro[cyclopropane-1,15'- tricyclo[18.3.1.0-5,10]tetracosane]-1'(24'),20',22'-triene-4',11',14',17'-tetrone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C37 H47 N3 O8" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2~{R},5~{S},12~{R})-12-cyclohexyl-2-[2-(3,4-dimethoxyphenyl)ethyl]spiro[3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0^{5,10}]tetracosa-1(24),20,22-triene-15,1'-cyclopropane]-4,11,14,17-tetrone" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-10-20 _chem_comp.pdbx_modified_date 2021-04-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 661.784 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RTT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AOU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RTT CAX C1 C 0 1 N N N 0.452 19.240 -19.397 -6.417 -2.474 -2.583 CAX RTT 1 RTT OAV O1 O 0 1 N N N -0.279 19.702 -18.266 -7.412 -1.963 -1.693 OAV RTT 2 RTT CAQ C2 C 0 1 Y N N 0.187 20.790 -17.627 -6.974 -1.249 -0.622 CAQ RTT 3 RTT CAP C3 C 0 1 Y N N 1.352 21.518 -17.963 -5.617 -1.040 -0.435 CAP RTT 4 RTT CAR C4 C 0 1 Y N N -0.628 21.247 -16.612 -7.888 -0.722 0.286 CAR RTT 5 RTT OAU O2 O 0 1 N N N -1.747 20.463 -16.369 -9.221 -0.921 0.104 OAU RTT 6 RTT CAW C5 C 0 1 N N N -2.767 21.045 -15.565 -10.100 -0.351 1.076 CAW RTT 7 RTT CAS C6 C 0 1 Y N N -0.278 22.382 -15.887 -7.436 0.004 1.376 CAS RTT 8 RTT CAT C7 C 0 1 Y N N 0.886 23.073 -16.237 -6.081 0.204 1.560 CAT RTT 9 RTT CAO C8 C 0 1 Y N N 1.713 22.659 -17.271 -5.173 -0.314 0.655 CAO RTT 10 RTT CAN C9 C 0 1 N N N 2.903 23.395 -17.635 -3.697 -0.088 0.857 CAN RTT 11 RTT CAM C10 C 0 1 N N N 4.194 22.675 -17.200 -3.278 1.202 0.150 CAM RTT 12 RTT CAK C11 C 0 1 N N R 4.379 22.721 -15.675 -1.779 1.432 0.355 CAK RTT 13 RTT OAL O3 O 0 1 N N N 5.430 21.685 -15.324 -1.040 0.373 -0.303 OAL RTT 14 RTT C C12 C 0 1 N N N 5.110 20.746 -14.476 -0.579 -0.617 0.477 C RTT 15 RTT O O4 O 0 1 N N N 3.959 20.657 -14.098 -0.659 -0.514 1.678 O RTT 16 RTT CA C13 C 0 1 N N S 6.188 19.969 -13.942 0.034 -1.852 -0.119 CA RTT 17 RTT CB C14 C 0 1 N N N 6.068 19.694 -12.536 -0.813 -3.070 0.274 CB RTT 18 RTT CBD C15 C 0 1 N N N 6.491 20.965 -11.775 -0.096 -4.344 -0.165 CBD RTT 19 RTT CAY C16 C 0 1 N N N 7.933 21.256 -12.079 1.264 -4.487 0.499 CAY RTT 20 RTT CAZ C17 C 0 1 N N N 8.172 21.352 -13.566 1.699 -3.218 1.221 CAZ RTT 21 RTT N N1 N 0 1 N N N 7.552 20.266 -14.368 1.397 -2.041 0.395 N RTT 22 RTT CBG C18 C 0 1 N N N 8.158 19.671 -15.419 2.365 -1.148 0.120 CBG RTT 23 RTT OBI O5 O 0 1 N N N 7.530 18.860 -16.065 2.109 -0.169 -0.549 OBI RTT 24 RTT CBH C19 C 0 1 N N R 9.578 19.965 -15.742 3.762 -1.358 0.639 CBH RTT 25 RTT CBJ C20 C 0 1 N N N 10.281 18.997 -16.650 4.321 -2.672 0.089 CBJ RTT 26 RTT CBP C21 C 0 1 N N N 11.497 19.399 -17.259 4.502 -2.555 -1.425 CBP RTT 27 RTT CBR C22 C 0 1 N N N 12.084 18.354 -18.243 5.061 -3.869 -1.975 CBR RTT 28 RTT CBS C23 C 0 1 N N N 12.167 16.995 -17.645 6.413 -4.162 -1.321 CBS RTT 29 RTT CBT C24 C 0 1 N N N 10.795 16.579 -17.110 6.231 -4.279 0.194 CBT RTT 30 RTT CBQ C25 C 0 1 N N N 10.290 17.567 -16.118 5.673 -2.965 0.743 CBQ RTT 31 RTT NBK N2 N 0 1 N N N 9.775 21.366 -16.187 4.611 -0.233 0.196 NBK RTT 32 RTT CBL C26 C 0 1 N N N 10.870 22.104 -15.726 4.417 0.956 0.827 CBL RTT 33 RTT OBN O6 O 0 1 N N N 11.598 21.643 -14.834 3.593 1.051 1.712 OBN RTT 34 RTT CBM C27 C 0 1 N N N 11.085 23.385 -16.316 5.231 2.150 0.420 CBM RTT 35 RTT CBU C28 C 0 1 N N N 12.354 23.516 -17.069 6.262 1.973 -0.691 CBU RTT 36 RTT CBV C29 C 0 1 N N N 12.244 24.258 -15.845 6.720 2.156 0.759 CBV RTT 37 RTT NBO N3 N 0 1 N N N 9.948 24.144 -16.804 4.521 3.449 0.479 NBO RTT 38 RTT CAI C30 C 0 1 N N N 9.185 24.875 -15.930 3.193 3.389 0.148 CAI RTT 39 RTT OAJ O7 O 0 1 N N N 9.290 24.673 -14.725 2.677 2.331 -0.145 OAJ RTT 40 RTT CAH C31 C 0 1 N N N 8.314 25.874 -16.527 2.385 4.661 0.156 CAH RTT 41 RTT OAG O8 O 0 1 N N N 7.534 26.502 -15.507 1.565 4.715 -1.013 OAG RTT 42 RTT CAD C32 C 0 1 Y N N 6.428 25.819 -15.053 0.260 4.369 -0.867 CAD RTT 43 RTT CAE C33 C 0 1 Y N N 5.959 24.619 -15.591 -0.077 3.123 -0.361 CAE RTT 44 RTT CAF C34 C 0 1 Y N N 4.797 23.997 -15.126 -1.404 2.776 -0.206 CAF RTT 45 RTT CAA C35 C 0 1 Y N N 4.123 24.620 -14.101 -2.399 3.673 -0.560 CAA RTT 46 RTT CAB C36 C 0 1 Y N N 4.567 25.785 -13.531 -2.064 4.913 -1.069 CAB RTT 47 RTT CAC C37 C 0 1 Y N N 5.723 26.413 -14.014 -0.738 5.265 -1.223 CAC RTT 48 RTT H1 H1 H 0 1 N N N -0.042 18.350 -19.815 -5.751 -3.143 -2.038 H1 RTT 49 RTT H2 H2 H 0 1 N N N 0.487 20.032 -20.159 -6.900 -3.022 -3.392 H2 RTT 50 RTT H3 H3 H 0 1 N N N 1.476 18.981 -19.091 -5.842 -1.646 -2.998 H3 RTT 51 RTT H4 H4 H 0 1 N N N 1.973 21.175 -18.778 -4.906 -1.445 -1.140 H4 RTT 52 RTT H5 H5 H 0 1 N N N -3.594 20.330 -15.446 -9.874 -0.765 2.058 H5 RTT 53 RTT H6 H6 H 0 1 N N N -2.356 21.297 -14.576 -9.965 0.731 1.098 H6 RTT 54 RTT H7 H7 H 0 1 N N N -3.140 21.959 -16.051 -11.132 -0.583 0.812 H7 RTT 55 RTT H8 H8 H 0 1 N N N -0.895 22.723 -15.068 -8.144 0.414 2.082 H8 RTT 56 RTT H9 H9 H 0 1 N N N 1.151 23.961 -15.682 -5.730 0.771 2.410 H9 RTT 57 RTT H10 H10 H 0 1 N N N 2.920 23.522 -18.728 -3.485 -0.003 1.923 H10 RTT 58 RTT H11 H11 H 0 1 N N N 2.869 24.383 -17.152 -3.141 -0.928 0.442 H11 RTT 59 RTT H12 H12 H 0 1 N N N 4.143 21.624 -17.522 -3.490 1.118 -0.916 H12 RTT 60 RTT H13 H13 H 0 1 N N N 5.055 23.164 -17.679 -3.834 2.042 0.566 H13 RTT 61 RTT H14 H14 H 0 1 N N N 3.429 22.421 -15.208 -1.557 1.415 1.422 H14 RTT 62 RTT H15 H15 H 0 1 N N N 6.014 18.980 -14.392 0.062 -1.770 -1.204 H15 RTT 63 RTT H16 H16 H 0 1 N N N 5.026 19.439 -12.291 -0.952 -3.084 1.355 H16 RTT 64 RTT H17 H17 H 0 1 N N N 6.725 18.856 -12.260 -1.785 -3.012 -0.218 H17 RTT 65 RTT H18 H18 H 0 1 N N N 5.868 21.812 -12.096 -0.711 -5.205 0.097 H18 RTT 66 RTT H19 H19 H 0 1 N N N 6.366 20.807 -10.694 0.039 -4.321 -1.246 H19 RTT 67 RTT H20 H20 H 0 1 N N N 8.556 20.448 -11.667 1.221 -5.305 1.218 H20 RTT 68 RTT H21 H21 H 0 1 N N N 8.213 22.210 -11.609 2.005 -4.728 -0.264 H21 RTT 69 RTT H22 H22 H 0 1 N N N 9.258 21.329 -13.740 1.167 -3.141 2.169 H22 RTT 70 RTT H23 H23 H 0 1 N N N 7.765 22.312 -13.917 2.772 -3.260 1.411 H23 RTT 71 RTT H24 H24 H 0 1 N N N 10.111 19.891 -14.783 3.745 -1.396 1.728 H24 RTT 72 RTT H25 H25 H 0 1 N N N 9.587 18.924 -17.501 3.627 -3.483 0.311 H25 RTT 73 RTT H26 H26 H 0 1 N N N 12.237 19.582 -16.466 3.539 -2.346 -1.891 H26 RTT 74 RTT H27 H27 H 0 1 N N N 11.315 20.332 -17.813 5.196 -1.744 -1.647 H27 RTT 75 RTT H28 H28 H 0 1 N N N 13.095 18.673 -18.535 4.367 -4.680 -1.754 H28 RTT 76 RTT H29 H29 H 0 1 N N N 11.441 18.309 -19.135 5.190 -3.786 -3.054 H29 RTT 77 RTT H30 H30 H 0 1 N N N 12.492 16.278 -18.413 6.811 -5.098 -1.713 H30 RTT 78 RTT H31 H31 H 0 1 N N N 12.894 17.003 -16.819 7.107 -3.351 -1.542 H31 RTT 79 RTT H32 H32 H 0 1 N N N 10.086 16.516 -17.948 5.537 -5.089 0.415 H32 RTT 80 RTT H33 H33 H 0 1 N N N 10.880 15.595 -16.627 7.194 -4.487 0.660 H33 RTT 81 RTT H34 H34 H 0 1 N N N 9.262 17.290 -15.840 6.367 -2.154 0.522 H34 RTT 82 RTT H35 H35 H 0 1 N N N 10.934 17.529 -15.227 5.544 -3.048 1.823 H35 RTT 83 RTT H36 H36 H 0 1 N N N 9.123 21.784 -16.819 5.272 -0.336 -0.507 H36 RTT 84 RTT H37 H37 H 0 1 N N N 13.042 22.660 -17.123 6.364 0.980 -1.130 H37 RTT 85 RTT H38 H38 H 0 1 N N N 12.361 24.053 -18.029 6.413 2.807 -1.376 H38 RTT 86 RTT H39 H39 H 0 1 N N N 12.835 23.961 -14.966 7.172 3.111 1.028 H39 RTT 87 RTT H40 H40 H 0 1 N N N 12.154 25.354 -15.872 7.122 1.284 1.275 H40 RTT 88 RTT H41 H41 H 0 1 N N N 9.721 24.134 -17.778 4.962 4.275 0.731 H41 RTT 89 RTT H42 H42 H 0 1 N N N 8.924 26.632 -17.040 1.754 4.684 1.044 H42 RTT 90 RTT H43 H43 H 0 1 N N N 7.645 25.389 -17.253 3.059 5.518 0.168 H43 RTT 91 RTT H44 H44 H 0 1 N N N 6.513 24.156 -16.394 0.699 2.423 -0.088 H44 RTT 92 RTT H45 H45 H 0 1 N N N 3.211 24.175 -13.732 -3.437 3.403 -0.438 H45 RTT 93 RTT H46 H46 H 0 1 N N N 4.023 26.221 -12.706 -2.842 5.609 -1.347 H46 RTT 94 RTT H47 H47 H 0 1 N N N 6.061 27.345 -13.585 -0.478 6.236 -1.619 H47 RTT 95 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RTT CAX OAV SING N N 1 RTT OAV CAQ SING N N 2 RTT CBR CBS SING N N 3 RTT CBR CBP SING N N 4 RTT CAP CAQ DOUB Y N 5 RTT CAP CAO SING Y N 6 RTT CBS CBT SING N N 7 RTT CAN CAO SING N N 8 RTT CAN CAM SING N N 9 RTT CAQ CAR SING Y N 10 RTT CAO CAT DOUB Y N 11 RTT CBP CBJ SING N N 12 RTT CAM CAK SING N N 13 RTT CBT CBQ SING N N 14 RTT CBU CBM SING N N 15 RTT CBU CBV SING N N 16 RTT NBO CBM SING N N 17 RTT NBO CAI SING N N 18 RTT CBJ CBQ SING N N 19 RTT CBJ CBH SING N N 20 RTT CAR OAU SING N N 21 RTT CAR CAS DOUB Y N 22 RTT CAH CAI SING N N 23 RTT CAH OAG SING N N 24 RTT OAU CAW SING N N 25 RTT CBM CBV SING N N 26 RTT CBM CBL SING N N 27 RTT CAT CAS SING Y N 28 RTT NBK CBH SING N N 29 RTT NBK CBL SING N N 30 RTT OBI CBG DOUB N N 31 RTT CAI OAJ DOUB N N 32 RTT CBH CBG SING N N 33 RTT CBL OBN DOUB N N 34 RTT CAK OAL SING N N 35 RTT CAK CAF SING N N 36 RTT CAE CAF DOUB Y N 37 RTT CAE CAD SING Y N 38 RTT OAG CAD SING N N 39 RTT CBG N SING N N 40 RTT OAL C SING N N 41 RTT CAF CAA SING Y N 42 RTT CAD CAC DOUB Y N 43 RTT C O DOUB N N 44 RTT C CA SING N N 45 RTT N CA SING N N 46 RTT N CAZ SING N N 47 RTT CAA CAB DOUB Y N 48 RTT CAC CAB SING Y N 49 RTT CA CB SING N N 50 RTT CAZ CAY SING N N 51 RTT CB CBD SING N N 52 RTT CAY CBD SING N N 53 RTT CAX H1 SING N N 54 RTT CAX H2 SING N N 55 RTT CAX H3 SING N N 56 RTT CAP H4 SING N N 57 RTT CAW H5 SING N N 58 RTT CAW H6 SING N N 59 RTT CAW H7 SING N N 60 RTT CAS H8 SING N N 61 RTT CAT H9 SING N N 62 RTT CAN H10 SING N N 63 RTT CAN H11 SING N N 64 RTT CAM H12 SING N N 65 RTT CAM H13 SING N N 66 RTT CAK H14 SING N N 67 RTT CA H15 SING N N 68 RTT CB H16 SING N N 69 RTT CB H17 SING N N 70 RTT CBD H18 SING N N 71 RTT CBD H19 SING N N 72 RTT CAY H20 SING N N 73 RTT CAY H21 SING N N 74 RTT CAZ H22 SING N N 75 RTT CAZ H23 SING N N 76 RTT CBH H24 SING N N 77 RTT CBJ H25 SING N N 78 RTT CBP H26 SING N N 79 RTT CBP H27 SING N N 80 RTT CBR H28 SING N N 81 RTT CBR H29 SING N N 82 RTT CBS H30 SING N N 83 RTT CBS H31 SING N N 84 RTT CBT H32 SING N N 85 RTT CBT H33 SING N N 86 RTT CBQ H34 SING N N 87 RTT CBQ H35 SING N N 88 RTT NBK H36 SING N N 89 RTT CBU H37 SING N N 90 RTT CBU H38 SING N N 91 RTT CBV H39 SING N N 92 RTT CBV H40 SING N N 93 RTT NBO H41 SING N N 94 RTT CAH H42 SING N N 95 RTT CAH H43 SING N N 96 RTT CAE H44 SING N N 97 RTT CAA H45 SING N N 98 RTT CAB H46 SING N N 99 RTT CAC H47 SING N N 100 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RTT InChI InChI 1.03 "InChI=1S/C37H47N3O8/c1-45-30-17-15-24(21-31(30)46-2)14-16-29-26-11-8-12-27(22-26)47-23-32(41)39-37(18-19-37)36(44)38-33(25-9-4-3-5-10-25)34(42)40-20-7-6-13-28(40)35(43)48-29/h8,11-12,15,17,21-22,25,28-29,33H,3-7,9-10,13-14,16,18-20,23H2,1-2H3,(H,38,44)(H,39,41)/t28-,29+,33+/m0/s1" RTT InChIKey InChI 1.03 LGCJCGBJDQHKRA-FISMMAAMSA-N RTT SMILES_CANONICAL CACTVS 3.385 "COc1ccc(CC[C@H]2OC(=O)[C@@H]3CCCCN3C(=O)[C@H](NC(=O)C4(CC4)NC(=O)COc5cccc2c5)C6CCCCC6)cc1OC" RTT SMILES CACTVS 3.385 "COc1ccc(CC[CH]2OC(=O)[CH]3CCCCN3C(=O)[CH](NC(=O)C4(CC4)NC(=O)COc5cccc2c5)C6CCCCC6)cc1OC" RTT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)CC[C@@H]2c3cccc(c3)OCC(=O)NC4(CC4)C(=O)N[C@@H](C(=O)N5CCCC[C@H]5C(=O)O2)C6CCCCC6" RTT SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)CCC2c3cccc(c3)OCC(=O)NC4(CC4)C(=O)NC(C(=O)N5CCCCC5C(=O)O2)C6CCCCC6" # _pdbx_chem_comp_identifier.comp_id RTT _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},5~{S},12~{R})-12-cyclohexyl-2-[2-(3,4-dimethoxyphenyl)ethyl]spiro[3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0^{5,10}]tetracosa-1(24),20,22-triene-15,1'-cyclopropane]-4,11,14,17-tetrone" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id RTT _pdbx_chem_comp_synonyms.name "(2~{R},5~{S},12~{R})-12-cyclohexyl-2-[2-(3,4-dimethoxyphenyl)ethyl]spiro[3,19-dioxa-10,13,16-triazatricyclo[18.3.1.0^{5,10}]tetracosa-1(24),20,22-triene-15,1'-cyclopropane]-4,11,14,17-tetrone" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RTT "Create component" 2020-10-20 PDBE RTT "Modify synonyms" 2021-03-13 RCSB RTT "Initial release" 2021-04-21 RCSB ##