data_RX0
#
_chem_comp.id RX0
_chem_comp.name "[(1S,3R,4S)-3-amino-4-hydroxycyclopentyl]{(3R)-3-[(1S)-1-(biphenyl-2-yl)-1-hydroxy-5-methoxypentyl]piperidin-1-yl}methanone"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H40 N2 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2011-02-14
_chem_comp.pdbx_modified_date 2011-07-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 480.639
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code RX0
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3Q3T
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RX0 C1 C1 C 0 1 Y N N 37.668 -21.059 -26.827 -1.909 -2.266 -0.668 C1 RX0 1
RX0 C2 C2 C 0 1 Y N N 38.524 -21.887 -27.564 -3.069 -2.994 -0.411 C2 RX0 2
RX0 C3 C3 C 0 1 Y N N 36.681 -20.349 -27.514 -0.720 -2.614 -0.031 C3 RX0 3
RX0 C4 C4 C 0 1 Y N N 38.384 -22.044 -28.948 -3.036 -4.050 0.477 C4 RX0 4
RX0 C5 C5 C 0 1 Y N N 36.532 -20.509 -28.894 -0.698 -3.672 0.855 C5 RX0 5
RX0 C6 C6 C 0 1 Y N N 37.379 -21.359 -29.624 -1.854 -4.387 1.111 C6 RX0 6
RX0 C7 C7 C 0 1 N N N 33.798 -24.674 -27.277 3.292 0.036 0.612 C7 RX0 7
RX0 O8 O8 O 0 1 N N N 32.860 -24.319 -27.945 3.147 -1.090 1.040 O8 RX0 8
RX0 N9 N9 N 0 1 N N N 33.883 -24.549 -25.874 2.267 0.661 0.000 N9 RX0 9
RX0 C10 C10 C 0 1 N N N 33.578 -22.250 -25.087 1.396 2.941 -0.044 C10 RX0 10
RX0 C11 C11 C 0 1 N N N 34.888 -22.348 -24.317 0.006 2.340 -0.261 C11 RX0 11
RX0 C12 C12 C 0 1 N N R 35.858 -23.182 -25.143 -0.097 1.015 0.489 C12 RX0 12
RX0 C13 C13 C 0 1 N N N 35.250 -24.557 -25.292 0.940 0.034 -0.067 C13 RX0 13
RX0 C14 C14 C 0 1 N N N 32.937 -23.615 -25.222 2.454 1.986 -0.607 C14 RX0 14
RX0 C15 C15 C 0 1 N N S 37.270 -23.198 -24.538 -1.498 0.428 0.300 C15 RX0 15
RX0 O16 O16 O 0 1 N N N 37.235 -23.925 -23.327 -1.602 -0.800 1.023 O16 RX0 16
RX0 C17 C17 C 0 1 Y N N 37.722 -21.769 -24.321 -1.742 0.171 -1.165 C17 RX0 17
RX0 C18 C18 C 0 1 Y N N 37.981 -21.350 -23.002 -1.764 1.224 -2.057 C18 RX0 18
RX0 C19 C19 C 0 1 Y N N 37.878 -20.838 -25.356 -1.939 -1.130 -1.622 C19 RX0 19
RX0 C20 C20 C 0 1 Y N N 38.413 -20.061 -22.705 -1.987 0.990 -3.402 C20 RX0 20
RX0 C21 C21 C 0 1 Y N N 38.318 -19.546 -25.038 -2.163 -1.360 -2.978 C21 RX0 21
RX0 C22 C22 C 0 1 Y N N 38.579 -19.141 -23.737 -2.190 -0.300 -3.860 C22 RX0 22
RX0 C23 C23 C 0 1 N N N 38.327 -24.015 -25.268 -2.540 1.418 0.824 C23 RX0 23
RX0 C24 C24 C 0 1 N N N 39.715 -24.019 -24.596 -3.937 0.809 0.686 C24 RX0 24
RX0 C25 C25 C 0 1 N N N 40.605 -25.119 -25.167 -4.979 1.799 1.210 C25 RX0 25
RX0 C26 C26 C 0 1 N N N 40.221 -26.434 -24.505 -6.376 1.190 1.072 C26 RX0 26
RX0 O27 O27 O 0 1 N N N 41.307 -27.332 -24.650 -7.349 2.115 1.562 O27 RX0 27
RX0 C28 C28 C 0 1 N N N 40.895 -28.657 -24.980 -8.695 1.641 1.478 C28 RX0 28
RX0 C29 C29 C 0 1 N N N 35.781 -24.471 -28.820 5.357 0.814 -0.593 C29 RX0 29
RX0 C30 C30 C 0 1 N N S 36.412 -25.455 -29.779 6.844 0.958 -0.207 C30 RX0 30
RX0 C31 C31 C 0 1 N N R 35.632 -26.779 -29.684 6.989 0.372 1.208 C31 RX0 31
RX0 C32 C32 C 0 1 N N N 34.313 -26.408 -29.038 5.586 -0.108 1.633 C32 RX0 32
RX0 C33 C33 C 0 1 N N S 34.856 -25.385 -28.037 4.618 0.735 0.766 C33 RX0 33
RX0 O34 O34 O 0 1 N N N 36.205 -24.835 -31.022 7.661 0.229 -1.125 O34 RX0 34
RX0 N35 N35 N 0 1 N N N 35.444 -27.492 -30.979 7.924 -0.761 1.190 N35 RX0 35
RX0 H2 H2 H 0 1 N N N 39.312 -22.418 -27.051 -3.993 -2.732 -0.905 H2 RX0 36
RX0 H3 H3 H 0 1 N N N 36.031 -19.674 -26.977 0.184 -2.056 -0.230 H3 RX0 37
RX0 H4 H4 H 0 1 N N N 39.054 -22.695 -29.490 -3.935 -4.614 0.677 H4 RX0 38
RX0 H5 H5 H 0 1 N N N 35.751 -19.969 -29.409 0.224 -3.942 1.349 H5 RX0 39
RX0 H6 H6 H 0 1 N N N 37.253 -21.479 -30.690 -1.832 -5.214 1.805 H6 RX0 40
RX0 H10 H10 H 0 1 N N N 33.779 -21.846 -26.090 1.464 3.898 -0.559 H10 RX0 41
RX0 H10A H10A H 0 0 N N N 32.892 -21.582 -24.546 1.566 3.089 1.023 H10A RX0 42
RX0 H11 H11 H 0 1 N N N 35.303 -21.343 -24.152 -0.751 3.030 0.113 H11 RX0 43
RX0 H11A H11A H 0 0 N N N 34.716 -22.828 -23.342 -0.154 2.169 -1.326 H11A RX0 44
RX0 H12 H12 H 0 1 N N N 36.001 -22.738 -26.139 0.087 1.182 1.550 H12 RX0 45
RX0 H13 H13 H 0 1 N N N 35.192 -25.014 -24.293 0.700 -0.203 -1.104 H13 RX0 46
RX0 H13A H13A H 0 0 N N N 35.899 -25.147 -25.956 0.937 -0.878 0.528 H13A RX0 47
RX0 H14 H14 H 0 1 N N N 32.026 -23.532 -25.833 3.449 2.361 -0.367 H14 RX0 48
RX0 H14A H14A H 0 0 N N N 32.677 -23.997 -24.224 2.340 1.912 -1.689 H14A RX0 49
RX0 HO16 HO16 H 0 0 N N N 38.103 -23.942 -22.942 -1.456 -0.710 1.974 HO16 RX0 50
RX0 H18 H18 H 0 1 N N N 37.840 -22.052 -22.194 -1.607 2.233 -1.705 H18 RX0 51
RX0 H20 H20 H 0 1 N N N 38.618 -19.777 -21.683 -2.005 1.817 -4.096 H20 RX0 52
RX0 H21 H21 H 0 1 N N N 38.460 -18.836 -25.839 -2.317 -2.367 -3.337 H21 RX0 53
RX0 H22 H22 H 0 1 N N N 38.904 -18.132 -23.529 -2.364 -0.477 -4.911 H22 RX0 54
RX0 H23 H23 H 0 1 N N N 37.974 -25.056 -25.315 -2.340 1.634 1.874 H23 RX0 55
RX0 H23A H23A H 0 0 N N N 38.443 -23.590 -26.276 -2.487 2.341 0.247 H23A RX0 56
RX0 H24 H24 H 0 1 N N N 40.197 -23.046 -24.770 -4.137 0.593 -0.363 H24 RX0 57
RX0 H24A H24A H 0 0 N N N 39.587 -24.190 -23.517 -3.990 -0.114 1.263 H24A RX0 58
RX0 H25 H25 H 0 1 N N N 40.459 -25.191 -26.255 -4.779 2.015 2.260 H25 RX0 59
RX0 H25A H25A H 0 0 N N N 41.661 -24.891 -24.961 -4.926 2.722 0.633 H25A RX0 60
RX0 H26 H26 H 0 1 N N N 40.010 -26.269 -23.438 -6.576 0.974 0.023 H26 RX0 61
RX0 H26A H26A H 0 0 N N N 39.324 -26.849 -24.987 -6.429 0.267 1.650 H26A RX0 62
RX0 H28 H28 H 0 1 N N N 41.780 -29.303 -25.078 -9.372 2.400 1.869 H28 RX0 63
RX0 H28A H28A H 0 0 N N N 40.243 -29.047 -24.184 -8.943 1.434 0.437 H28A RX0 64
RX0 H28B H28B H 0 0 N N N 40.344 -28.643 -25.932 -8.796 0.727 2.064 H28B RX0 65
RX0 H29 H29 H 0 1 N N N 36.524 -23.976 -28.178 5.024 1.685 -1.158 H29 RX0 66
RX0 H29A H29A H 0 0 N N N 35.237 -23.669 -29.340 5.197 -0.097 -1.168 H29A RX0 67
RX0 H30 H30 H 0 1 N N N 37.471 -25.685 -29.592 7.129 2.010 -0.206 H30 RX0 68
RX0 H31 H31 H 0 1 N N N 36.205 -27.511 -29.095 7.345 1.139 1.896 H31 RX0 69
RX0 H32 H32 H 0 1 N N N 33.580 -25.989 -29.743 5.464 -1.169 1.418 H32 RX0 70
RX0 H32A H32A H 0 0 N N N 33.800 -27.258 -28.565 5.419 0.090 2.692 H32A RX0 71
RX0 H33 H33 H 0 1 N N N 35.415 -25.889 -27.235 4.484 1.730 1.192 H33 RX0 72
RX0 HO34 HO34 H 0 0 N N N 36.569 -25.377 -31.712 7.597 0.538 -2.039 HO34 RX0 73
RX0 HN35 HN35 H 0 0 N N N 34.931 -28.336 -30.824 8.842 -0.467 0.892 HN35 RX0 74
RX0 HN3A HN3A H 0 0 N N N 34.938 -26.906 -31.612 7.963 -1.212 2.092 HN3A RX0 75
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RX0 C2 C1 DOUB Y N 1
RX0 C3 C1 SING Y N 2
RX0 C1 C19 SING Y N 3
RX0 C4 C2 SING Y N 4
RX0 C2 H2 SING N N 5
RX0 C5 C3 DOUB Y N 6
RX0 C3 H3 SING N N 7
RX0 C6 C4 DOUB Y N 8
RX0 C4 H4 SING N N 9
RX0 C6 C5 SING Y N 10
RX0 C5 H5 SING N N 11
RX0 C6 H6 SING N N 12
RX0 C33 C7 SING N N 13
RX0 O8 C7 DOUB N N 14
RX0 C7 N9 SING N N 15
RX0 N9 C13 SING N N 16
RX0 N9 C14 SING N N 17
RX0 C14 C10 SING N N 18
RX0 C10 C11 SING N N 19
RX0 C10 H10 SING N N 20
RX0 C10 H10A SING N N 21
RX0 C12 C11 SING N N 22
RX0 C11 H11 SING N N 23
RX0 C11 H11A SING N N 24
RX0 C13 C12 SING N N 25
RX0 C12 C15 SING N N 26
RX0 C12 H12 SING N N 27
RX0 C13 H13 SING N N 28
RX0 C13 H13A SING N N 29
RX0 C14 H14 SING N N 30
RX0 C14 H14A SING N N 31
RX0 C23 C15 SING N N 32
RX0 C15 C17 SING N N 33
RX0 C15 O16 SING N N 34
RX0 O16 HO16 SING N N 35
RX0 C19 C17 DOUB Y N 36
RX0 C17 C18 SING Y N 37
RX0 C18 C20 DOUB Y N 38
RX0 C18 H18 SING N N 39
RX0 C19 C21 SING Y N 40
RX0 C22 C20 SING Y N 41
RX0 C20 H20 SING N N 42
RX0 C21 C22 DOUB Y N 43
RX0 C21 H21 SING N N 44
RX0 C22 H22 SING N N 45
RX0 C23 C24 SING N N 46
RX0 C23 H23 SING N N 47
RX0 C23 H23A SING N N 48
RX0 C25 C24 SING N N 49
RX0 C24 H24 SING N N 50
RX0 C24 H24A SING N N 51
RX0 C25 C26 SING N N 52
RX0 C25 H25 SING N N 53
RX0 C25 H25A SING N N 54
RX0 O27 C26 SING N N 55
RX0 C26 H26 SING N N 56
RX0 C26 H26A SING N N 57
RX0 C28 O27 SING N N 58
RX0 C28 H28 SING N N 59
RX0 C28 H28A SING N N 60
RX0 C28 H28B SING N N 61
RX0 C30 C29 SING N N 62
RX0 C29 C33 SING N N 63
RX0 C29 H29 SING N N 64
RX0 C29 H29A SING N N 65
RX0 O34 C30 SING N N 66
RX0 C30 C31 SING N N 67
RX0 C30 H30 SING N N 68
RX0 N35 C31 SING N N 69
RX0 C31 C32 SING N N 70
RX0 C31 H31 SING N N 71
RX0 C32 C33 SING N N 72
RX0 C32 H32 SING N N 73
RX0 C32 H32A SING N N 74
RX0 C33 H33 SING N N 75
RX0 O34 HO34 SING N N 76
RX0 N35 HN35 SING N N 77
RX0 N35 HN3A SING N N 78
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RX0 SMILES ACDLabs 12.01 "O=C(N3CCCC(C(O)(c2ccccc2c1ccccc1)CCCCOC)C3)C4CC(N)C(O)C4"
RX0 SMILES_CANONICAL CACTVS 3.370 "COCCCC[C@](O)([C@@H]1CCCN(C1)C(=O)[C@H]2C[C@@H](N)[C@@H](O)C2)c3ccccc3c4ccccc4"
RX0 SMILES CACTVS 3.370 "COCCCC[C](O)([CH]1CCCN(C1)C(=O)[CH]2C[CH](N)[CH](O)C2)c3ccccc3c4ccccc4"
RX0 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "COCCCC[C@@](c1ccccc1c2ccccc2)([C@@H]3CCCN(C3)C(=O)[C@H]4C[C@H]([C@H](C4)O)N)O"
RX0 SMILES "OpenEye OEToolkits" 1.7.0 "COCCCCC(c1ccccc1c2ccccc2)(C3CCCN(C3)C(=O)C4CC(C(C4)O)N)O"
RX0 InChI InChI 1.03
"InChI=1S/C29H40N2O4/c1-35-17-8-7-15-29(34,25-14-6-5-13-24(25)21-10-3-2-4-11-21)23-12-9-16-31(20-23)28(33)22-18-26(30)27(32)19-22/h2-6,10-11,13-14,22-23,26-27,32,34H,7-9,12,15-20,30H2,1H3/t22-,23+,26+,27-,29-/m0/s1"
RX0 InChIKey InChI 1.03 GBAKDRIJFSDCNN-YJFNBJRFSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RX0 "SYSTEMATIC NAME" ACDLabs 12.01 "[(1S,3R,4S)-3-amino-4-hydroxycyclopentyl]{(3R)-3-[(1S)-1-(biphenyl-2-yl)-1-hydroxy-5-methoxypentyl]piperidin-1-yl}methanone"
RX0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[(1S,3R,4S)-3-azanyl-4-hydroxy-cyclopentyl]-[(3R)-3-[(1S)-1-hydroxy-5-methoxy-1-(2-phenylphenyl)pentyl]piperidin-1-yl]methanone"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RX0 "Create component" 2011-02-14 RCSB
RX0 "Modify aromatic_flag" 2011-06-04 RCSB
RX0 "Modify descriptor" 2011-06-04 RCSB
#