data_RY6 # _chem_comp.id RY6 _chem_comp.name "(1S,2S)-1-(4-carbamamidobenzamido)-4-hydroxy-2,3-dihydro-1H-indene-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-06-23 _chem_comp.pdbx_modified_date 2022-07-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 355.345 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RY6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5SPA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RY6 C16 C1 C 0 1 Y N N -44.399 -31.442 0.241 -4.002 0.132 0.145 C16 RY6 1 RY6 C17 C2 C 0 1 Y N N -43.965 -32.541 -0.462 -4.826 0.723 1.095 C17 RY6 2 RY6 C15 C3 C 0 1 N N N -43.656 -30.135 0.507 -4.179 -1.144 -0.649 C15 RY6 3 RY6 C12 C4 C 0 1 N N N -43.750 -29.874 2.998 -2.047 -2.402 -0.225 C12 RY6 4 RY6 C11 C5 C 0 1 N N S -44.386 -29.525 1.661 -2.772 -1.488 -1.180 C11 RY6 5 RY6 C10 C6 C 0 1 N N S -45.781 -30.033 1.498 -2.092 -0.104 -1.237 C10 RY6 6 RY6 C20 C7 C 0 1 Y N N -46.046 -33.653 0.013 -3.252 2.510 1.354 C20 RY6 7 RY6 C19 C8 C 0 1 Y N N -44.791 -33.650 -0.579 -4.449 1.913 1.699 C19 RY6 8 RY6 C02 C9 C 0 1 N N N -51.811 -29.057 7.944 6.052 -0.276 1.133 C02 RY6 9 RY6 C04 C10 C 0 1 Y N N -49.772 -29.047 6.428 4.318 0.398 -0.344 C04 RY6 10 RY6 C05 C11 C 0 1 Y N N -48.390 -29.126 6.420 3.858 1.505 -1.049 C05 RY6 11 RY6 C06 C12 C 0 1 Y N N -47.710 -29.171 5.220 2.521 1.620 -1.358 C06 RY6 12 RY6 C07 C13 C 0 1 Y N N -48.444 -29.126 4.045 1.626 0.622 -0.962 C07 RY6 13 RY6 C08 C14 C 0 1 N N N -47.754 -29.230 2.710 0.193 0.741 -1.292 C08 RY6 14 RY6 C21 C15 C 0 1 Y N N -46.474 -32.542 0.724 -2.430 1.918 0.414 C21 RY6 15 RY6 C22 C16 C 0 1 Y N N -45.634 -31.432 0.857 -2.804 0.730 -0.193 C22 RY6 16 RY6 C24 C17 C 0 1 Y N N -49.820 -29.084 4.043 2.092 -0.489 -0.254 C24 RY6 17 RY6 C25 C18 C 0 1 Y N N -50.497 -29.044 5.243 3.431 -0.600 0.047 C25 RY6 18 RY6 N01 N1 N 0 1 N N N -52.194 -29.110 9.326 7.356 -0.308 1.472 N01 RY6 19 RY6 N03 N2 N 0 1 N N N -50.389 -29.051 7.729 5.673 0.285 -0.033 N03 RY6 20 RY6 N09 N3 N 0 1 N N N -46.465 -29.874 2.735 -0.669 -0.222 -0.910 N09 RY6 21 RY6 O13 O1 O 0 1 N N N -43.823 -31.037 3.485 -2.213 -2.285 0.966 O13 RY6 22 RY6 O14 O2 O 0 1 N N N -43.152 -28.948 3.603 -1.218 -3.345 -0.698 O14 RY6 23 RY6 O18 O3 O 0 1 N N N -42.692 -32.453 -1.035 -6.003 0.134 1.434 O18 RY6 24 RY6 O23 O4 O 0 1 N N N -48.284 -28.924 1.694 -0.211 1.708 -1.909 O23 RY6 25 RY6 O26 O5 O 0 1 N N N -52.618 -28.991 7.080 5.218 -0.752 1.878 O26 RY6 26 RY6 H151 H1 H 0 0 N N N -42.606 -30.330 0.769 -4.546 -1.943 -0.004 H151 RY6 27 RY6 H152 H2 H 0 0 N N N -43.698 -29.476 -0.373 -4.867 -0.981 -1.479 H152 RY6 28 RY6 H111 H3 H 0 0 N N N -44.387 -28.431 1.546 -2.830 -1.936 -2.172 H111 RY6 29 RY6 H101 H4 H 0 0 N N N -46.274 -29.395 0.750 -2.217 0.339 -2.225 H101 RY6 30 RY6 H201 H5 H 0 0 N N N -46.687 -34.517 -0.080 -2.955 3.437 1.823 H201 RY6 31 RY6 H191 H6 H 0 0 N N N -44.456 -34.514 -1.133 -5.090 2.372 2.437 H191 RY6 32 RY6 H051 H7 H 0 0 N N N -47.845 -29.152 7.352 4.550 2.276 -1.355 H051 RY6 33 RY6 H061 H8 H 0 0 N N N -46.632 -29.240 5.197 2.165 2.480 -1.905 H061 RY6 34 RY6 H211 H9 H 0 0 N N N -47.455 -32.534 1.175 -1.492 2.385 0.150 H211 RY6 35 RY6 H241 H10 H 0 0 N N N -50.364 -29.082 3.110 1.403 -1.262 0.054 H241 RY6 36 RY6 H251 H11 H 0 0 N N N -51.576 -29.011 5.262 3.791 -1.459 0.595 H251 RY6 37 RY6 H012 H12 H 0 0 N N N -53.162 -29.091 9.578 8.022 0.072 0.877 H012 RY6 38 RY6 H011 H13 H 0 0 N N N -51.493 -29.165 10.037 7.629 -0.711 2.311 H011 RY6 39 RY6 H031 H14 H 0 0 N N N -49.793 -29.050 8.532 6.342 0.609 -0.656 H031 RY6 40 RY6 H091 H15 H 0 0 N N N -46.065 -30.198 3.592 -0.347 -0.993 -0.417 H091 RY6 41 RY6 H1 H16 H 0 1 N N N -42.802 -29.278 4.422 -0.776 -3.908 -0.047 H1 RY6 42 RY6 H181 H17 H 0 0 N N N -42.309 -31.609 -0.828 -5.933 -0.490 2.169 H181 RY6 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RY6 O18 C17 SING N N 1 RY6 C19 C17 DOUB Y N 2 RY6 C19 C20 SING Y N 3 RY6 C17 C16 SING Y N 4 RY6 C20 C21 DOUB Y N 5 RY6 C16 C15 SING N N 6 RY6 C16 C22 DOUB Y N 7 RY6 C15 C11 SING N N 8 RY6 C21 C22 SING Y N 9 RY6 C22 C10 SING N N 10 RY6 C10 C11 SING N N 11 RY6 C10 N09 SING N N 12 RY6 C11 C12 SING N N 13 RY6 O23 C08 DOUB N N 14 RY6 C08 N09 SING N N 15 RY6 C08 C07 SING N N 16 RY6 C12 O13 DOUB N N 17 RY6 C12 O14 SING N N 18 RY6 C24 C07 DOUB Y N 19 RY6 C24 C25 SING Y N 20 RY6 C07 C06 SING Y N 21 RY6 C06 C05 DOUB Y N 22 RY6 C25 C04 DOUB Y N 23 RY6 C05 C04 SING Y N 24 RY6 C04 N03 SING N N 25 RY6 O26 C02 DOUB N N 26 RY6 N03 C02 SING N N 27 RY6 C02 N01 SING N N 28 RY6 C15 H151 SING N N 29 RY6 C15 H152 SING N N 30 RY6 C11 H111 SING N N 31 RY6 C10 H101 SING N N 32 RY6 C20 H201 SING N N 33 RY6 C19 H191 SING N N 34 RY6 C05 H051 SING N N 35 RY6 C06 H061 SING N N 36 RY6 C21 H211 SING N N 37 RY6 C24 H241 SING N N 38 RY6 C25 H251 SING N N 39 RY6 N01 H012 SING N N 40 RY6 N01 H011 SING N N 41 RY6 N03 H031 SING N N 42 RY6 N09 H091 SING N N 43 RY6 O14 H1 SING N N 44 RY6 O18 H181 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RY6 SMILES ACDLabs 12.01 "NC(=O)Nc1ccc(cc1)C(=O)NC1c2cccc(O)c2CC1C(=O)O" RY6 InChI InChI 1.06 "InChI=1S/C18H17N3O5/c19-18(26)20-10-6-4-9(5-7-10)16(23)21-15-11-2-1-3-14(22)12(11)8-13(15)17(24)25/h1-7,13,15,22H,8H2,(H,21,23)(H,24,25)(H3,19,20,26)/t13-,15+/m0/s1" RY6 InChIKey InChI 1.06 UYUBQOHPPHHZPI-DZGCQCFKSA-N RY6 SMILES_CANONICAL CACTVS 3.385 "NC(=O)Nc1ccc(cc1)C(=O)N[C@H]2[C@H](Cc3c(O)cccc23)C(O)=O" RY6 SMILES CACTVS 3.385 "NC(=O)Nc1ccc(cc1)C(=O)N[CH]2[CH](Cc3c(O)cccc23)C(O)=O" RY6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)O)C[C@@H]([C@@H]2NC(=O)c3ccc(cc3)NC(=O)N)C(=O)O" RY6 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)O)CC(C2NC(=O)c3ccc(cc3)NC(=O)N)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier RY6 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-1-(4-carbamamidobenzamido)-4-hydroxy-2,3-dihydro-1H-indene-2-carboxylic acid" RY6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S})-1-[[4-(aminocarbonylamino)phenyl]carbonylamino]-4-oxidanyl-2,3-dihydro-1~{H}-indene-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RY6 "Create component" 2022-06-23 RCSB RY6 "Initial release" 2022-07-13 RCSB #