data_RYF # _chem_comp.id RYF _chem_comp.name "~{N}-(4-iodophenyl)-1~{H}-pyrazolo[3,4-d]pyrimidin-4-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H8 I N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-09 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 337.119 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RYF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BVX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RYF N12 N1 N 0 1 Y N N N N N -12.027 -13.823 10.427 6.454 0.188 -0.083 N12 RYF 1 RYF C15 C1 C 0 1 Y N N N N N -10.201 -14.816 11.153 4.306 -0.378 -0.046 C15 RYF 2 RYF C17 C2 C 0 1 Y N N N N N -6.817 -17.631 14.872 -1.616 -1.451 0.538 C17 RYF 3 RYF I01 I1 I 0 1 N N N N N N -4.175 -18.106 16.306 -4.120 0.166 -0.020 I01 RYF 4 RYF C02 C3 C 0 1 Y N N N N N -5.467 -17.322 14.835 -2.072 -0.271 -0.023 C02 RYF 5 RYF C03 C4 C 0 1 Y N N N N N -4.969 -16.500 13.835 -1.176 0.620 -0.587 C03 RYF 6 RYF C04 C5 C 0 1 Y N N N N N -5.826 -15.988 12.875 0.175 0.335 -0.591 C04 RYF 7 RYF C05 C6 C 0 1 Y N N N N N -7.181 -16.292 12.905 0.635 -0.849 -0.027 C05 RYF 8 RYF N06 N2 N 0 1 N N N N N N -8.018 -15.718 11.863 2.002 -1.140 -0.029 N06 RYF 9 RYF C07 C7 C 0 1 Y N N N N N -9.466 -15.852 11.782 2.927 -0.118 0.070 C07 RYF 10 RYF N08 N3 N 0 1 Y N N N N N -10.123 -16.914 12.248 2.536 1.135 0.278 N08 RYF 11 RYF C09 C8 C 0 1 Y N N N N N -11.450 -17.003 12.146 3.414 2.118 0.374 C09 RYF 12 RYF N10 N4 N 0 1 Y N N N N N -12.165 -16.047 11.567 4.711 1.924 0.273 N10 RYF 13 RYF C11 C9 C 0 1 Y N N N N N -11.563 -14.935 11.058 5.201 0.704 0.064 C11 RYF 14 RYF N13 N5 N 0 1 Y N N N N N -10.975 -13.010 10.124 6.339 -1.193 -0.288 N13 RYF 15 RYF C14 C10 C 0 1 Y N N N N N -9.857 -13.577 10.548 5.082 -1.536 -0.272 C14 RYF 16 RYF C16 C11 C 0 1 Y N N N N N -7.673 -17.120 13.910 -0.266 -1.739 0.543 C16 RYF 17 RYF H1 H1 H 0 1 N N N N N N -12.986 -13.632 10.219 7.283 0.691 -0.055 H1 RYF 18 RYF H2 H2 H 0 1 N N N N N N -7.203 -18.271 15.652 -2.318 -2.145 0.978 H2 RYF 19 RYF H3 H3 H 0 1 N N N N N N -3.916 -16.260 13.805 -1.535 1.540 -1.025 H3 RYF 20 RYF H4 H4 H 0 1 N N N N N N -5.438 -15.347 12.097 0.873 1.029 -1.035 H4 RYF 21 RYF H5 H5 H 0 1 N N N N N N -7.563 -15.190 11.146 2.302 -2.060 -0.100 H5 RYF 22 RYF H6 H6 H 0 1 N N N N N N -11.953 -17.872 12.543 3.052 3.122 0.544 H6 RYF 23 RYF H7 H7 H 0 1 N N N N N N -8.861 -13.171 10.451 4.699 -2.537 -0.403 H7 RYF 24 RYF H8 H8 H 0 1 N N N N N N -8.725 -17.365 13.940 0.089 -2.660 0.982 H8 RYF 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RYF N13 N12 SING Y N 1 RYF N13 C14 DOUB Y N 2 RYF N12 C11 SING Y N 3 RYF C14 C15 SING Y N 4 RYF C11 C15 DOUB Y N 5 RYF C11 N10 SING Y N 6 RYF C15 C07 SING Y N 7 RYF N10 C09 DOUB Y N 8 RYF C07 N06 SING N N 9 RYF C07 N08 DOUB Y N 10 RYF N06 C05 SING N N 11 RYF C09 N08 SING Y N 12 RYF C04 C05 DOUB Y N 13 RYF C04 C03 SING Y N 14 RYF C05 C16 SING Y N 15 RYF C03 C02 DOUB Y N 16 RYF C16 C17 DOUB Y N 17 RYF C02 C17 SING Y N 18 RYF C02 I01 SING N N 19 RYF N12 H1 SING N N 20 RYF C17 H2 SING N N 21 RYF C03 H3 SING N N 22 RYF C04 H4 SING N N 23 RYF N06 H5 SING N N 24 RYF C09 H6 SING N N 25 RYF C14 H7 SING N N 26 RYF C16 H8 SING N N 27 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RYF InChI InChI 1.06 "InChI=1S/C11H8IN5/c12-7-1-3-8(4-2-7)16-10-9-5-15-17-11(9)14-6-13-10/h1-6H,(H2,13,14,15,16,17)" RYF InChIKey InChI 1.06 QSDMHOAEIDKWQL-UHFFFAOYSA-N RYF SMILES_CANONICAL CACTVS 3.385 "Ic1ccc(Nc2ncnc3[nH]ncc23)cc1" RYF SMILES CACTVS 3.385 "Ic1ccc(Nc2ncnc3[nH]ncc23)cc1" RYF SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(ccc1Nc2c3cn[nH]c3ncn2)I" RYF SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(ccc1Nc2c3cn[nH]c3ncn2)I" # _pdbx_chem_comp_identifier.comp_id RYF _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "~{N}-(4-iodophenyl)-1~{H}-pyrazolo[3,4-d]pyrimidin-4-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RYF "Create component" 2022-12-09 PDBE RYF "Initial release" 2024-05-15 RCSB #