data_RYR # _chem_comp.id RYR _chem_comp.name "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-2-methyl-2-[4-(trifluoromethyl)phenoxy]propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H20 F3 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-09 _chem_comp.pdbx_modified_date 2023-07-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 447.473 _chem_comp.one_letter_code ? _chem_comp.three_letter_code RYR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BWJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal RYR C19 C1 C 0 1 Y N N -22.507 20.546 1.692 -3.530 1.084 0.461 C19 RYR 1 RYR C15 C2 C 0 1 N N N -27.293 18.750 -1.199 -2.428 -2.421 2.048 C15 RYR 2 RYR C17 C3 C 0 1 Y N N -24.801 20.562 0.943 -4.147 -1.202 0.089 C17 RYR 3 RYR C18 C4 C 0 1 Y N N -23.523 19.995 0.928 -3.199 -0.257 0.454 C18 RYR 4 RYR C20 C5 C 0 1 Y N N -22.744 21.666 2.473 -4.805 1.485 0.105 C20 RYR 5 RYR C14 C6 C 0 1 N N N -25.903 18.872 -0.558 -2.538 -2.878 0.592 C14 RYR 6 RYR C13 C7 C 0 1 N N N -24.841 19.063 -1.654 -1.464 -2.210 -0.227 C13 RYR 7 RYR C10 C8 C 0 1 Y N N -23.690 22.201 -3.333 0.673 -1.454 -1.979 C10 RYR 8 RYR C11 C9 C 0 1 Y N N -23.902 20.831 -3.273 0.829 -1.711 -0.622 C11 RYR 9 RYR C02 C10 C 0 1 N N N -20.361 16.125 -6.893 7.429 1.628 -0.205 C02 RYR 10 RYR C04 C11 C 0 1 Y N N -20.606 17.604 -6.753 6.221 0.895 0.207 C04 RYR 11 RYR C05 C12 C 0 1 Y N N -21.485 18.154 -5.789 5.196 0.564 -0.606 C05 RYR 12 RYR C06 C13 C 0 1 Y N N -21.500 19.648 -5.920 4.179 -0.127 0.037 C06 RYR 13 RYR C07 C14 C 0 1 Y N N -22.319 20.533 -5.010 2.956 -0.590 -0.663 C07 RYR 14 RYR C08 C15 C 0 1 Y N N -22.081 21.893 -5.062 2.795 -0.346 -2.025 C08 RYR 15 RYR C09 C16 C 0 1 Y N N -22.786 22.740 -4.232 1.654 -0.774 -2.674 C09 RYR 16 RYR C21 C17 C 0 1 N N N -21.618 22.267 3.310 -5.165 2.948 0.120 C21 RYR 17 RYR C25 C18 C 0 1 Y N N -24.001 22.227 2.488 -5.749 0.545 -0.265 C25 RYR 18 RYR C26 C19 C 0 1 Y N N -25.017 21.676 1.725 -5.421 -0.797 -0.279 C26 RYR 19 RYR C27 C20 C 0 1 N N N -25.557 17.661 0.314 -2.363 -4.397 0.520 C27 RYR 20 RYR C29 C21 C 0 1 Y N N -23.189 19.970 -4.086 1.969 -1.280 0.038 C29 RYR 21 RYR C30 C22 C 0 1 Y N N -20.646 20.092 -6.964 4.394 -0.343 1.350 C30 RYR 22 RYR F22 F1 F 0 1 N N N -20.907 23.156 2.583 -4.411 3.604 1.099 F22 RYR 23 RYR F23 F2 F 0 1 N N N -20.830 21.243 3.751 -4.892 3.508 -1.132 F23 RYR 24 RYR F24 F3 F 0 1 N N N -22.105 22.923 4.405 -6.527 3.090 0.407 F24 RYR 25 RYR N01 N1 N 0 1 N N N -19.805 15.660 -7.912 7.569 2.012 -1.446 N01 RYR 26 RYR N03 N2 N 0 1 N N N -20.831 15.276 -5.834 8.414 1.911 0.720 N03 RYR 27 RYR N12 N3 N 0 1 N N N -24.858 20.386 -2.260 -0.165 -2.404 0.078 N12 RYR 28 RYR O16 O1 O 0 1 N N N -25.907 20.069 0.208 -3.822 -2.522 0.076 O16 RYR 29 RYR O28 O2 O 0 1 N N N -24.064 18.204 -1.944 -1.768 -1.498 -1.160 O28 RYR 30 RYR S31 S1 S 0 1 Y N N -19.924 18.784 -7.626 5.895 0.310 1.832 S31 RYR 31 RYR H191 H1 H 0 0 N N N -21.524 20.100 1.679 -2.794 1.820 0.749 H191 RYR 32 RYR H151 H2 H 0 0 N N N -28.050 18.614 -0.412 -3.250 -2.845 2.625 H151 RYR 33 RYR H152 H3 H 0 0 N N N -27.516 19.665 -1.767 -1.479 -2.759 2.465 H152 RYR 34 RYR H153 H4 H 0 0 N N N -27.309 17.884 -1.877 -2.477 -1.333 2.092 H153 RYR 35 RYR H181 H5 H 0 0 N N N -23.327 19.125 0.319 -2.203 -0.569 0.732 H181 RYR 36 RYR H101 H6 H 0 0 N N N -24.237 22.855 -2.670 -0.216 -1.790 -2.492 H101 RYR 37 RYR H051 H7 H 0 0 N N N -22.057 17.585 -5.070 5.169 0.813 -1.657 H051 RYR 38 RYR H081 H8 H 0 0 N N N -21.348 22.291 -5.748 3.562 0.182 -2.573 H081 RYR 39 RYR H091 H9 H 0 0 N N N -22.635 23.808 -4.283 1.528 -0.577 -3.729 H091 RYR 40 RYR H251 H10 H 0 0 N N N -24.195 23.098 3.096 -6.744 0.860 -0.543 H251 RYR 41 RYR H261 H11 H 0 0 N N N -25.998 22.128 1.743 -6.161 -1.531 -0.563 H261 RYR 42 RYR H273 H12 H 0 0 N N N -26.325 17.538 1.092 -3.086 -4.877 1.180 H273 RYR 43 RYR H271 H13 H 0 0 N N N -25.521 16.757 -0.312 -2.526 -4.733 -0.504 H271 RYR 44 RYR H272 H14 H 0 0 N N N -24.577 17.819 0.788 -1.353 -4.662 0.833 H272 RYR 45 RYR H291 H15 H 0 0 N N N -23.304 18.899 -4.005 2.089 -1.471 1.094 H291 RYR 46 RYR H301 H16 H 0 0 N N N -20.499 21.118 -7.268 3.712 -0.863 2.007 H301 RYR 47 RYR H011 H17 H 0 0 N N N -19.740 14.663 -7.881 8.365 2.495 -1.718 H011 RYR 48 RYR H032 H19 H 0 0 N N N -21.300 15.674 -5.045 8.310 1.626 1.641 H032 RYR 49 RYR H121 H20 H 0 0 N N N -25.565 21.029 -1.966 0.080 -3.023 0.783 H121 RYR 50 RYR H031 H21 H 0 0 N N N -20.690 14.287 -5.886 9.210 2.394 0.448 H031 RYR 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal RYR N01 C02 DOUB N N 1 RYR S31 C30 SING Y N 2 RYR S31 C04 SING Y N 3 RYR C30 C06 DOUB Y N 4 RYR C02 C04 SING N N 5 RYR C02 N03 SING N N 6 RYR C04 C05 DOUB Y N 7 RYR C06 C05 SING Y N 8 RYR C06 C07 SING N N 9 RYR C08 C07 DOUB Y N 10 RYR C08 C09 SING Y N 11 RYR C07 C29 SING Y N 12 RYR C09 C10 DOUB Y N 13 RYR C29 C11 DOUB Y N 14 RYR C10 C11 SING Y N 15 RYR C11 N12 SING N N 16 RYR N12 C13 SING N N 17 RYR O28 C13 DOUB N N 18 RYR C13 C14 SING N N 19 RYR C15 C14 SING N N 20 RYR C14 O16 SING N N 21 RYR C14 C27 SING N N 22 RYR O16 C17 SING N N 23 RYR C18 C17 DOUB Y N 24 RYR C18 C19 SING Y N 25 RYR C17 C26 SING Y N 26 RYR C19 C20 DOUB Y N 27 RYR C26 C25 DOUB Y N 28 RYR C20 C25 SING Y N 29 RYR C20 C21 SING N N 30 RYR F22 C21 SING N N 31 RYR C21 F23 SING N N 32 RYR C21 F24 SING N N 33 RYR C19 H191 SING N N 34 RYR C15 H151 SING N N 35 RYR C15 H152 SING N N 36 RYR C15 H153 SING N N 37 RYR C18 H181 SING N N 38 RYR C10 H101 SING N N 39 RYR C05 H051 SING N N 40 RYR C08 H081 SING N N 41 RYR C09 H091 SING N N 42 RYR C25 H251 SING N N 43 RYR C26 H261 SING N N 44 RYR C27 H273 SING N N 45 RYR C27 H271 SING N N 46 RYR C27 H272 SING N N 47 RYR C29 H291 SING N N 48 RYR C30 H301 SING N N 49 RYR N01 H011 SING N N 50 RYR N03 H032 SING N N 51 RYR N12 H121 SING N N 52 RYR N03 H031 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor RYR InChI InChI 1.06 "InChI=1S/C22H20F3N3O2S/c1-21(2,30-17-8-6-15(7-9-17)22(23,24)25)20(29)28-16-5-3-4-13(10-16)14-11-18(19(26)27)31-12-14/h3-12H,1-2H3,(H3,26,27)(H,28,29)" RYR InChIKey InChI 1.06 OQVWICYACULMHT-UHFFFAOYSA-N RYR SMILES_CANONICAL CACTVS 3.385 "CC(C)(Oc1ccc(cc1)C(F)(F)F)C(=O)Nc2cccc(c2)c3csc(c3)C(N)=N" RYR SMILES CACTVS 3.385 "CC(C)(Oc1ccc(cc1)C(F)(F)F)C(=O)Nc2cccc(c2)c3csc(c3)C(N)=N" RYR SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[H]/N=C(\c1cc(cs1)c2cccc(c2)NC(=O)C(C)(C)Oc3ccc(cc3)C(F)(F)F)/N" RYR SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)(C(=O)Nc1cccc(c1)c2cc(sc2)C(=N)N)Oc3ccc(cc3)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id RYR _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-2-methyl-2-[4-(trifluoromethyl)phenoxy]propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site RYR "Create component" 2022-12-09 PDBE RYR "Initial release" 2023-08-02 RCSB #