data_S00 # _chem_comp.id S00 _chem_comp.name "N-(benzylsulfonyl)-3-cyclohexyl-D-alanyl-N-(4-carbamimidoylbenzyl)-L-prolinamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H39 N5 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-04-25 _chem_comp.pdbx_modified_date 2012-04-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 553.716 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S00 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3RM2 _chem_comp.pdbx_subcomponent_list "PMS ZAL PRO 00S" _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S00 C7 C7 C 0 1 N N N 14.663 -15.183 21.148 -4.358 -1.286 0.035 C PMS 1 S00 S8 S8 S 0 1 N N N 15.419 -16.452 21.952 -3.103 -1.347 -1.273 S PMS 2 S00 C4 C4 C 0 1 Y N N 13.656 -15.675 20.129 -4.661 -2.685 0.506 C1 PMS 3 S00 C5 C5 C 0 1 Y N N 12.302 -15.687 20.445 -5.727 -3.380 -0.035 C2 PMS 4 S00 C6 C6 C 0 1 Y N N 11.375 -16.144 19.508 -6.006 -4.663 0.399 C3 PMS 5 S00 C1 C1 C 0 1 Y N N 11.794 -16.582 18.252 -5.219 -5.251 1.371 C4 PMS 6 S00 C2 C2 C 0 1 Y N N 13.148 -16.560 17.935 -4.152 -4.556 1.910 C5 PMS 7 S00 C3 C3 C 0 1 Y N N 14.073 -16.106 18.870 -3.874 -3.273 1.478 C6 PMS 8 S00 O12 O12 O 0 1 N N N 16.311 -17.149 21.080 -1.875 -1.847 -0.764 O2S PMS 9 S00 O13 O13 O 0 1 N N N 14.408 -17.298 22.529 -3.661 -1.860 -2.476 O1S PMS 10 S00 C15 C15 C 0 1 N N N 19.563 -14.410 24.429 -4.218 2.521 -0.437 C1 ZAL 11 S00 C16 C16 C 0 1 N N N 20.601 -15.437 23.991 -4.795 3.911 -0.714 C2 ZAL 12 S00 C17 C17 C 0 1 N N N 21.996 -14.817 24.012 -6.296 3.909 -0.415 C3 ZAL 13 S00 C18 C18 C 0 1 N N N 22.346 -14.227 25.376 -6.523 3.545 1.054 C4 ZAL 14 S00 C19 C19 C 0 1 N N N 21.277 -13.253 25.857 -5.946 2.155 1.331 C5 ZAL 15 S00 C20 C20 C 0 1 N N N 19.902 -13.911 25.835 -4.445 2.158 1.032 C6 ZAL 16 S00 N9 N9 N 0 1 N N N 16.288 -15.850 23.162 -2.785 0.242 -1.616 N ZAL 17 S00 C10 C10 C 0 1 N N R 17.588 -15.225 22.995 -2.169 1.101 -0.602 CA ZAL 18 S00 C14 C14 C 0 1 N N N 18.167 -15.032 24.403 -2.718 2.523 -0.736 CB ZAL 19 S00 C11 C11 C 0 1 N N N 17.452 -13.871 22.338 -0.675 1.118 -0.799 C ZAL 20 S00 O31 O31 O 0 1 N N N 16.558 -13.102 22.682 -0.175 0.477 -1.698 O ZAL 21 S00 N21 N21 N 0 1 N N N 18.325 -13.525 21.386 0.105 1.847 0.024 N PRO 22 S00 C22 C22 C 0 1 N N S 18.201 -12.208 20.748 1.569 1.954 -0.054 CA PRO 23 S00 C26 C26 C 0 1 N N N 16.879 -12.097 20.046 2.191 0.589 0.098 C PRO 24 S00 O30 O30 O 0 1 N N N 16.441 -13.033 19.392 1.485 -0.384 0.258 O PRO 25 S00 C23 C23 C 0 1 N N N 19.346 -12.109 19.750 2.024 2.870 1.101 CB PRO 26 S00 C24 C24 C 0 1 N N N 20.051 -13.449 19.753 0.846 2.774 2.106 CG PRO 27 S00 C25 C25 C 0 1 N N N 19.431 -14.314 20.841 -0.370 2.675 1.148 CD PRO 28 S00 N27 N27 N 0 1 N N N 16.200 -10.966 20.179 3.531 0.451 0.058 N23 00S 29 S00 C28 C28 C 0 1 N N N 14.900 -10.732 19.578 4.135 -0.875 0.206 C16 00S 30 S00 C29 C29 C 0 1 Y N N 13.876 -10.751 20.691 5.635 -0.756 0.124 C17 00S 31 S00 C33 C33 C 0 1 Y N N 13.105 -11.882 20.907 6.269 -0.863 -1.100 C22 00S 32 S00 C34 C34 C 0 1 Y N N 12.168 -11.916 21.931 7.642 -0.755 -1.182 C21 00S 33 S00 C35 C35 C 0 1 Y N N 11.994 -10.812 22.755 8.391 -0.536 -0.026 C24 00S 34 S00 C37 C37 C 0 1 N N N 10.976 -10.826 23.854 9.865 -0.419 -0.106 C27 00S 35 S00 N38 N38 N 0 1 N N N 10.346 -11.887 24.157 10.465 -0.520 -1.258 N35 00S 36 S00 N39 N39 N 0 1 N N N 10.726 -9.696 24.496 10.603 -0.203 1.038 N34 00S 37 S00 C36 C36 C 0 1 Y N N 12.772 -9.684 22.536 7.747 -0.434 1.207 C19 00S 38 S00 C32 C32 C 0 1 Y N N 13.706 -9.644 21.511 6.373 -0.544 1.275 C18 00S 39 S00 H7 H7 H 0 1 N N N 15.430 -14.591 20.627 -5.267 -0.828 -0.355 H2A PMS 40 S00 H7A H7A H 0 1 N N N 14.138 -14.561 21.888 -3.983 -0.695 0.871 H1 PMS 41 S00 H5 H5 H 0 1 N N N 11.969 -15.343 21.413 -6.342 -2.920 -0.794 H2 PMS 42 S00 H6 H6 H 0 1 N N N 10.324 -16.159 19.757 -6.839 -5.206 -0.023 H3 PMS 43 S00 H1 H1 H 0 1 N N N 11.072 -16.936 17.531 -5.434 -6.255 1.705 H4 PMS 44 S00 H2 H2 H 0 1 N N N 13.481 -16.895 16.964 -3.537 -5.015 2.670 H5 PMS 45 S00 H3 H3 H 0 1 N N N 15.123 -16.087 18.619 -3.041 -2.730 1.900 H6 PMS 46 S00 H15 H15 H 0 1 N N N 19.575 -13.557 23.734 -4.714 1.788 -1.073 H1 ZAL 47 S00 H16 H16 H 0 1 N N N 20.575 -16.295 24.679 -4.299 4.643 -0.077 H2 ZAL 48 S00 H16A H16A H 0 0 N N N 20.369 -15.774 22.970 -4.634 4.170 -1.760 H2A ZAL 49 S00 H17 H17 H 0 1 N N N 22.730 -15.599 23.770 -6.707 4.899 -0.612 H3 ZAL 50 S00 H17A H17A H 0 0 N N N 22.033 -14.012 23.263 -6.792 3.176 -1.051 H3A ZAL 51 S00 H18 H18 H 0 1 N N N 22.432 -15.047 26.105 -6.026 4.278 1.691 H4 ZAL 52 S00 H18A H18A H 0 0 N N N 23.303 -13.690 25.295 -7.592 3.544 1.267 H4A ZAL 53 S00 H19 H19 H 0 1 N N N 21.511 -12.942 26.886 -6.107 1.896 2.377 H5 ZAL 54 S00 H19A H19A H 0 0 N N N 21.266 -12.375 25.195 -6.442 1.423 0.694 H5A ZAL 55 S00 H20 H20 H 0 1 N N N 19.146 -13.175 26.147 -4.034 1.167 1.229 H6 ZAL 56 S00 H20A H20A H 0 0 N N N 19.901 -14.765 26.529 -3.949 2.890 1.668 H6A ZAL 57 S00 HN9 HN9 H 0 1 N N N 15.711 -15.139 23.564 -3.008 0.604 -2.488 HN ZAL 58 S00 H10 H10 H 0 1 N N N 18.233 -15.852 22.361 -2.400 0.715 0.391 HA ZAL 59 S00 H14 H14 H 0 1 N N N 17.490 -14.366 24.959 -2.207 3.178 -0.029 HB ZAL 60 S00 H14A H14A H 0 0 N N N 18.228 -16.021 24.882 -2.550 2.883 -1.751 HBA ZAL 61 S00 H22 H22 H 0 1 N N N 18.248 -11.395 21.487 1.858 2.390 -1.010 HA PRO 62 S00 H23 H23 H 0 1 N N N 18.959 -11.883 18.745 2.945 2.497 1.549 HB2 PRO 63 S00 H23A H23A H 0 0 N N N 20.042 -11.310 20.045 2.151 3.895 0.752 HB3 PRO 64 S00 H24 H24 H 0 1 N N N 19.931 -13.937 18.774 0.933 1.881 2.725 HG2 PRO 65 S00 H24A H24A H 0 0 N N N 21.123 -13.307 19.955 0.784 3.671 2.722 HG3 PRO 66 S00 H25 H25 H 0 1 N N N 20.168 -14.546 21.624 -0.659 3.665 0.794 HD2 PRO 67 S00 H25A H25A H 0 0 N N N 19.065 -15.264 20.424 -1.208 2.191 1.648 HD3 PRO 68 S00 HN27 HN27 H 0 0 N N N 16.607 -10.233 20.724 4.095 1.230 -0.070 HN23 00S 69 S00 H28 H28 H 0 1 N N N 14.888 -9.757 19.068 3.856 -1.295 1.172 H16 00S 70 S00 H28A H28A H 0 0 N N N 14.675 -11.519 18.843 3.779 -1.528 -0.591 H16A 00S 71 S00 H33 H33 H 0 1 N N N 13.234 -12.746 20.272 5.688 -1.033 -1.995 H22 00S 72 S00 H34 H34 H 0 1 N N N 11.573 -12.804 22.087 8.136 -0.839 -2.138 H21 00S 73 S00 HN38 HN38 H 0 0 N N N 9.690 -11.735 24.896 11.431 -0.444 -1.310 HN35 00S 74 S00 HN39 HN39 H 0 0 N N N 10.039 -9.675 25.222 10.156 -0.127 1.895 HN34 00S 75 S00 HN3A HN3A H 0 0 N N N 11.224 -8.863 24.255 11.568 -0.126 0.985 HN3A 00S 76 S00 H36 H36 H 0 1 N N N 12.648 -8.822 23.175 8.322 -0.268 2.106 H19 00S 77 S00 H32 H32 H 0 1 N N N 14.298 -8.755 21.352 5.873 -0.465 2.229 H18 00S 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S00 C1 C2 DOUB Y N 1 S00 C1 C6 SING Y N 2 S00 C2 C3 SING Y N 3 S00 C3 C4 DOUB Y N 4 S00 C4 C5 SING Y N 5 S00 C4 C7 SING N N 6 S00 C5 C6 DOUB Y N 7 S00 C7 S8 SING N N 8 S00 S8 N9 SING N N 9 S00 S8 O12 DOUB N N 10 S00 S8 O13 DOUB N N 11 S00 N9 C10 SING N N 12 S00 C10 C11 SING N N 13 S00 C10 C14 SING N N 14 S00 C11 N21 SING N N 15 S00 C11 O31 DOUB N N 16 S00 C14 C15 SING N N 17 S00 C15 C16 SING N N 18 S00 C15 C20 SING N N 19 S00 C16 C17 SING N N 20 S00 C17 C18 SING N N 21 S00 C18 C19 SING N N 22 S00 C19 C20 SING N N 23 S00 N21 C22 SING N N 24 S00 N21 C25 SING N N 25 S00 C22 C23 SING N N 26 S00 C22 C26 SING N N 27 S00 C23 C24 SING N N 28 S00 C24 C25 SING N N 29 S00 C26 N27 SING N N 30 S00 C26 O30 DOUB N N 31 S00 N27 C28 SING N N 32 S00 C28 C29 SING N N 33 S00 C29 C32 DOUB Y N 34 S00 C29 C33 SING Y N 35 S00 C32 C36 SING Y N 36 S00 C33 C34 DOUB Y N 37 S00 C34 C35 SING Y N 38 S00 C35 C36 DOUB Y N 39 S00 C35 C37 SING N N 40 S00 C37 N38 DOUB N N 41 S00 C37 N39 SING N N 42 S00 C1 H1 SING N N 43 S00 C2 H2 SING N N 44 S00 C3 H3 SING N N 45 S00 C5 H5 SING N N 46 S00 C6 H6 SING N N 47 S00 C7 H7 SING N N 48 S00 C7 H7A SING N N 49 S00 N9 HN9 SING N N 50 S00 C10 H10 SING N N 51 S00 C14 H14 SING N N 52 S00 C14 H14A SING N N 53 S00 C15 H15 SING N N 54 S00 C16 H16 SING N N 55 S00 C16 H16A SING N N 56 S00 C17 H17 SING N N 57 S00 C17 H17A SING N N 58 S00 C18 H18 SING N N 59 S00 C18 H18A SING N N 60 S00 C19 H19 SING N N 61 S00 C19 H19A SING N N 62 S00 C20 H20 SING N N 63 S00 C20 H20A SING N N 64 S00 C22 H22 SING N N 65 S00 C23 H23 SING N N 66 S00 C23 H23A SING N N 67 S00 C24 H24 SING N N 68 S00 C24 H24A SING N N 69 S00 C25 H25 SING N N 70 S00 C25 H25A SING N N 71 S00 N27 HN27 SING N N 72 S00 C28 H28 SING N N 73 S00 C28 H28A SING N N 74 S00 C32 H32 SING N N 75 S00 C33 H33 SING N N 76 S00 C34 H34 SING N N 77 S00 C36 H36 SING N N 78 S00 N38 HN38 SING N N 79 S00 N39 HN39 SING N N 80 S00 N39 HN3A SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S00 SMILES ACDLabs 12.01 "O=C(NCc1ccc(C(=[N@H])N)cc1)C4N(C(=O)C(NS(=O)(=O)Cc2ccccc2)CC3CCCCC3)CCC4" S00 SMILES_CANONICAL CACTVS 3.370 "NC(=N)c1ccc(CNC(=O)[C@@H]2CCCN2C(=O)[C@@H](CC3CCCCC3)N[S](=O)(=O)Cc4ccccc4)cc1" S00 SMILES CACTVS 3.370 "NC(=N)c1ccc(CNC(=O)[CH]2CCCN2C(=O)[CH](CC3CCCCC3)N[S](=O)(=O)Cc4ccccc4)cc1" S00 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "[H]/N=C(/c1ccc(cc1)CNC(=O)[C@@H]2CCCN2C(=O)[C@@H](CC3CCCCC3)NS(=O)(=O)Cc4ccccc4)\\N" S00 SMILES "OpenEye OEToolkits" 1.7.2 "c1ccc(cc1)CS(=O)(=O)NC(CC2CCCCC2)C(=O)N3CCCC3C(=O)NCc4ccc(cc4)C(=N)N" S00 InChI InChI 1.03 "InChI=1S/C29H39N5O4S/c30-27(31)24-15-13-22(14-16-24)19-32-28(35)26-12-7-17-34(26)29(36)25(18-21-8-3-1-4-9-21)33-39(37,38)20-23-10-5-2-6-11-23/h2,5-6,10-11,13-16,21,25-26,33H,1,3-4,7-9,12,17-20H2,(H3,30,31)(H,32,35)/t25-,26+/m1/s1" S00 InChIKey InChI 1.03 DJNNZKJZFCRFRX-FTJBHMTQSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier S00 "SYSTEMATIC NAME" ACDLabs 12.01 "N-(benzylsulfonyl)-3-cyclohexyl-D-alanyl-N-(4-carbamimidoylbenzyl)-L-prolinamide" S00 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "(2S)-N-[(4-carbamimidoylphenyl)methyl]-1-[(2R)-3-cyclohexyl-2-[(phenylmethyl)sulfonylamino]propanoyl]pyrrolidine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S00 "Create component" 2011-04-25 PDBJ S00 "Modify subcomponent list" 2011-05-05 PDBJ S00 "Modify aromatic_flag" 2011-06-04 RCSB S00 "Modify descriptor" 2011-06-04 RCSB #