data_S08 # _chem_comp.id S08 _chem_comp.name "2-(6-(((R)-2-amino-2-oxo-1-phenylethyl)carbamoyl)-1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborol-3-yl)acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 B N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-[(3S)-6-[[(1R)-2-azanyl-2-oxidanylidene-1-phenyl-ethyl]carbamoyl]-1-oxidanyl-3H-2,1-benzoxaborol-3-yl]ethanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-04 _chem_comp.pdbx_modified_date 2021-08-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 368.148 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S08 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 7AU1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S08 O6 O1 O 0 1 N N N -7.860 -0.094 19.305 ? ? ? O6 S08 1 S08 C2 C1 C 0 1 N N N -7.504 -0.044 18.134 ? ? ? C2 S08 2 S08 N N1 N 0 1 N N N -8.019 -0.893 17.239 ? ? ? N S08 3 S08 C1 C2 C 0 1 N N R -8.966 -1.916 17.644 ? ? ? C1 S08 4 S08 C12 C3 C 0 1 Y N N -8.331 -3.297 17.614 ? ? ? C12 S08 5 S08 C17 C4 C 0 1 Y N N -7.672 -3.748 16.473 ? ? ? C17 S08 6 S08 C16 C5 C 0 1 Y N N -7.109 -5.013 16.433 ? ? ? C16 S08 7 S08 C15 C6 C 0 1 Y N N -7.195 -5.847 17.529 ? ? ? C15 S08 8 S08 C14 C7 C 0 1 Y N N -7.843 -5.416 18.666 ? ? ? C14 S08 9 S08 C13 C8 C 0 1 Y N N -8.408 -4.148 18.710 ? ? ? C13 S08 10 S08 C C9 C 0 1 N N N -10.254 -1.819 16.789 ? ? ? C S08 11 S08 N1 N2 N 0 1 N N N -10.723 -0.611 16.543 ? ? ? N1 S08 12 S08 O O2 O 0 1 N N N -10.812 -2.843 16.393 ? ? ? O S08 13 S08 C3 C10 C 0 1 Y N N -6.343 0.805 17.740 ? ? ? C3 S08 14 S08 C11 C11 C 0 1 Y N N -6.092 1.997 18.426 ? ? ? C11 S08 15 S08 C7 C12 C 0 1 Y N N -4.969 2.778 18.135 ? ? ? C7 S08 16 S08 B B1 B 0 1 N N N -4.552 4.320 18.493 ? ? ? B S08 17 S08 O1 O3 O 0 1 N N N -3.228 4.392 17.750 ? ? ? O1 S08 18 S08 C8 C13 C 0 1 N N S -2.997 3.302 16.873 ? ? ? C8 S08 19 S08 C9 C14 C 0 1 N N N -1.650 2.657 17.115 ? ? ? C9 S08 20 S08 C10 C15 C 0 1 N N N -0.534 3.478 16.605 ? ? ? C10 S08 21 S08 O3 O4 O 0 1 N N N -0.590 3.890 15.453 ? ? ? O3 S08 22 S08 O2 O5 O 0 1 N N N 0.445 3.756 17.480 ? ? ? O2 S08 23 S08 C6 C16 C 0 1 Y N N -4.119 2.333 17.116 ? ? ? C6 S08 24 S08 C5 C17 C 0 1 Y N N -4.360 1.159 16.413 ? ? ? C5 S08 25 S08 C4 C18 C 0 1 Y N N -5.467 0.393 16.731 ? ? ? C4 S08 26 S08 H1 H1 H 0 1 N N N -7.749 -0.823 16.279 ? ? ? H1 S08 27 S08 H2 H2 H 0 1 N N N -9.259 -1.716 18.685 ? ? ? H2 S08 28 S08 H3 H3 H 0 1 N N N -7.599 -3.104 15.609 ? ? ? H3 S08 29 S08 H4 H4 H 0 1 N N N -6.601 -5.348 15.541 ? ? ? H4 S08 30 S08 H5 H5 H 0 1 N N N -6.756 -6.833 17.496 ? ? ? H5 S08 31 S08 H6 H6 H 0 1 N N N -7.912 -6.066 19.526 ? ? ? H6 S08 32 S08 H7 H7 H 0 1 N N N -8.913 -3.820 19.606 ? ? ? H7 S08 33 S08 H8 H8 H 0 1 N N N -11.565 -0.499 16.015 ? ? ? H8 S08 34 S08 H9 H9 H 0 1 N N N -10.237 0.193 16.884 ? ? ? H9 S08 35 S08 H10 H10 H 0 1 N N N -6.778 2.321 19.195 ? ? ? H10 S08 36 S08 H12 H12 H 0 1 N N N -3.042 3.643 15.828 ? ? ? H12 S08 37 S08 H13 H13 H 0 1 N N N -1.630 1.680 16.610 ? ? ? H13 S08 38 S08 H14 H14 H 0 1 N N N -1.517 2.513 18.197 ? ? ? H14 S08 39 S08 H15 H15 H 0 1 N N N 1.088 4.321 17.068 ? ? ? H15 S08 40 S08 H16 H16 H 0 1 N N N -3.689 0.848 15.626 ? ? ? H16 S08 41 S08 H17 H17 H 0 1 N N N -5.655 -0.527 16.198 ? ? ? H17 S08 42 S08 O4 O6 O 0 1 N N N -5.609 5.172 18.001 ? ? ? O4 S08 43 S08 H11 H11 H 0 1 N N N -5.295 5.668 17.254 ? ? ? H11 S08 44 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S08 O3 C10 DOUB N N 1 S08 O C DOUB N N 2 S08 C5 C4 DOUB Y N 3 S08 C5 C6 SING Y N 4 S08 C16 C17 DOUB Y N 5 S08 C16 C15 SING Y N 6 S08 C17 C12 SING Y N 7 S08 N1 C SING N N 8 S08 C10 C9 SING N N 9 S08 C10 O2 SING N N 10 S08 C4 C3 SING Y N 11 S08 C C1 SING N N 12 S08 C8 C9 SING N N 13 S08 C8 C6 SING N N 14 S08 C8 O1 SING N N 15 S08 C6 C7 DOUB Y N 16 S08 N C1 SING N N 17 S08 N C2 SING N N 18 S08 C15 C14 DOUB Y N 19 S08 C12 C1 SING N N 20 S08 C12 C13 DOUB Y N 21 S08 C3 C2 SING N N 22 S08 C3 C11 DOUB Y N 23 S08 O1 B SING N N 24 S08 C2 O6 DOUB N N 25 S08 C7 C11 SING Y N 26 S08 C7 B SING N N 27 S08 C14 C13 SING Y N 28 S08 N H1 SING N N 29 S08 C1 H2 SING N N 30 S08 C17 H3 SING N N 31 S08 C16 H4 SING N N 32 S08 C15 H5 SING N N 33 S08 C14 H6 SING N N 34 S08 C13 H7 SING N N 35 S08 N1 H8 SING N N 36 S08 N1 H9 SING N N 37 S08 C11 H10 SING N N 38 S08 C8 H12 SING N N 39 S08 C9 H13 SING N N 40 S08 C9 H14 SING N N 41 S08 O2 H15 SING N N 42 S08 C5 H16 SING N N 43 S08 C4 H17 SING N N 44 S08 B O4 SING N N 45 S08 O4 H11 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S08 InChI InChI 1.03 "InChI=1S/C18H17BN2O6/c20-17(24)16(10-4-2-1-3-5-10)21-18(25)11-6-7-12-13(8-11)19(26)27-14(12)9-15(22)23/h1-8,14,16,26H,9H2,(H2,20,24)(H,21,25)(H,22,23)/t14-,16+/m0/s1" S08 InChIKey InChI 1.03 IKQIDNCBKATNDV-GOEBONIOSA-N S08 SMILES_CANONICAL CACTVS 3.385 "NC(=O)[C@H](NC(=O)c1ccc2[C@H](CC(O)=O)OB(O)c2c1)c3ccccc3" S08 SMILES CACTVS 3.385 "NC(=O)[CH](NC(=O)c1ccc2[CH](CC(O)=O)OB(O)c2c1)c3ccccc3" S08 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B1(c2cc(ccc2[C@@H](O1)CC(=O)O)C(=O)N[C@H](c3ccccc3)C(=O)N)O" S08 SMILES "OpenEye OEToolkits" 2.0.7 "B1(c2cc(ccc2C(O1)CC(=O)O)C(=O)NC(c3ccccc3)C(=O)N)O" # _pdbx_chem_comp_identifier.comp_id S08 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[(3~{S})-6-[[(1~{R})-2-azanyl-2-oxidanylidene-1-phenyl-ethyl]carbamoyl]-1-oxidanyl-3~{H}-2,1-benzoxaborol-3-yl]ethanoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id S08 _pdbx_chem_comp_synonyms.name "2-[(3S)-6-[[(1R)-2-azanyl-2-oxidanylidene-1-phenyl-ethyl]carbamoyl]-1-oxidanyl-3H-2,1-benzoxaborol-3-yl]ethanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S08 "Create component" 2020-11-04 PDBE S08 "Initial release" 2021-08-11 RCSB ##