data_S1K # _chem_comp.id S1K _chem_comp.name "2-(5-(benzyloxy)-1-hydroxy-1,3-dihydrobenzo[c][1,2]oxaborol-3-yl)acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H15 B O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-[(3S)-1-oxidanyl-5-phenylmethoxy-3H-2,1-benzoxaborol-3-yl]ethanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-05 _chem_comp.pdbx_modified_date 2021-08-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 298.098 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S1K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AUB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S1K C12 C1 C 0 1 Y N N 6.625 -3.238 -14.553 -4.906 -0.563 1.189 C12 S1K 1 S1K C13 C2 C 0 1 Y N N 6.885 1.292 -18.089 -0.593 1.865 0.311 C13 S1K 2 S1K C14 C3 C 0 1 Y N N 6.500 2.466 -18.719 0.673 2.405 0.377 C14 S1K 3 S1K C15 C4 C 0 1 Y N N 5.291 3.104 -18.426 1.779 1.614 0.075 C15 S1K 4 S1K O O1 O 0 1 N N N -0.025 3.936 -17.703 5.179 -1.738 -0.873 O S1K 5 S1K C C5 C 0 1 N N N 0.848 3.648 -16.897 4.512 -2.155 0.045 C S1K 6 S1K O5 O2 O 0 1 N N N 0.916 4.102 -15.625 4.931 -3.217 0.750 O5 S1K 7 S1K C1 C6 C 0 1 N N N 1.992 2.755 -17.289 3.211 -1.482 0.397 C1 S1K 8 S1K C2 C7 C 0 1 N N S 3.337 3.422 -17.073 2.970 -0.308 -0.554 C2 S1K 9 S1K O4 O3 O 0 1 N N N 3.489 4.592 -17.859 3.964 0.692 -0.338 O4 S1K 10 S1K B B1 B 0 1 N N N 4.711 4.652 -18.744 3.323 1.899 0.050 B S1K 11 S1K C3 C8 C 0 1 Y N N 4.497 2.535 -17.432 1.608 0.278 -0.293 C3 S1K 12 S1K C5 C9 C 0 1 Y N N 6.049 0.729 -17.116 -0.763 0.535 -0.056 C5 S1K 13 S1K C4 C10 C 0 1 Y N N 4.847 1.345 -16.796 0.340 -0.255 -0.358 C4 S1K 14 S1K O1 O4 O 0 1 N N N 6.481 -0.421 -16.482 -2.011 0.004 -0.114 O1 S1K 15 S1K C6 C11 C 0 1 N N N 5.707 -1.059 -15.440 -3.100 0.870 0.214 C6 S1K 16 S1K C7 C12 C 0 1 Y N N 6.652 -1.845 -14.562 -4.397 0.112 0.095 C7 S1K 17 S1K C11 C13 C 0 1 Y N N 7.549 -3.960 -13.809 -6.096 -1.258 1.079 C11 S1K 18 S1K C10 C14 C 0 1 Y N N 8.510 -3.299 -13.059 -6.780 -1.273 -0.122 C10 S1K 19 S1K C9 C15 C 0 1 Y N N 8.538 -1.915 -13.049 -6.274 -0.593 -1.214 C9 S1K 20 S1K C8 C16 C 0 1 Y N N 7.615 -1.193 -13.792 -5.077 0.092 -1.108 C8 S1K 21 S1K H1 H1 H 0 1 N N N 5.878 -3.762 -15.131 -4.372 -0.551 2.127 H1 S1K 22 S1K H2 H2 H 0 1 N N N 7.820 0.817 -18.346 -1.453 2.474 0.549 H2 S1K 23 S1K H3 H3 H 0 1 N N N 7.155 2.901 -19.459 0.808 3.438 0.661 H3 S1K 24 S1K H4 H4 H 0 1 N N N 0.181 4.679 -15.455 5.773 -3.615 0.486 H4 S1K 25 S1K H5 H5 H 0 1 N N N 1.891 2.496 -18.353 2.395 -2.199 0.304 H5 S1K 26 S1K H6 H6 H 0 1 N N N 1.950 1.838 -16.683 3.258 -1.116 1.423 H6 S1K 27 S1K H7 H7 H 0 1 N N N 3.421 3.684 -16.008 3.024 -0.658 -1.585 H7 S1K 28 S1K H9 H9 H 0 1 N N N 4.189 0.906 -16.061 0.203 -1.288 -0.643 H9 S1K 29 S1K H10 H10 H 0 1 N N N 5.190 -0.296 -14.840 -2.982 1.230 1.236 H10 S1K 30 S1K H11 H11 H 0 1 N N N 4.966 -1.737 -15.889 -3.110 1.717 -0.471 H11 S1K 31 S1K H12 H12 H 0 1 N N N 7.519 -5.040 -13.815 -6.491 -1.789 1.932 H12 S1K 32 S1K H13 H13 H 0 1 N N N 9.233 -3.861 -12.486 -7.709 -1.817 -0.208 H13 S1K 33 S1K H14 H14 H 0 1 N N N 9.280 -1.396 -12.461 -6.807 -0.605 -2.152 H14 S1K 34 S1K H15 H15 H 0 1 N N N 7.643 -0.114 -13.774 -4.679 0.619 -1.962 H15 S1K 35 S1K O2 O5 O 0 1 N N N 4.367 4.896 -20.103 3.959 3.131 0.357 O2 S1K 36 S1K H8 H8 H 0 1 N N N 3.423 4.973 -20.182 4.923 3.106 0.283 H8 S1K 37 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S1K B C15 SING N N 1 S1K B O4 SING N N 2 S1K C14 C15 DOUB Y N 3 S1K C14 C13 SING Y N 4 S1K C15 C3 SING Y N 5 S1K C13 C5 DOUB Y N 6 S1K O4 C2 SING N N 7 S1K O C DOUB N N 8 S1K C3 C2 SING N N 9 S1K C3 C4 DOUB Y N 10 S1K C1 C2 SING N N 11 S1K C1 C SING N N 12 S1K C5 C4 SING Y N 13 S1K C5 O1 SING N N 14 S1K C O5 SING N N 15 S1K O1 C6 SING N N 16 S1K C6 C7 SING N N 17 S1K C7 C12 DOUB Y N 18 S1K C7 C8 SING Y N 19 S1K C12 C11 SING Y N 20 S1K C11 C10 DOUB Y N 21 S1K C8 C9 DOUB Y N 22 S1K C10 C9 SING Y N 23 S1K C12 H1 SING N N 24 S1K C13 H2 SING N N 25 S1K C14 H3 SING N N 26 S1K O5 H4 SING N N 27 S1K C1 H5 SING N N 28 S1K C1 H6 SING N N 29 S1K C2 H7 SING N N 30 S1K C4 H9 SING N N 31 S1K C6 H10 SING N N 32 S1K C6 H11 SING N N 33 S1K C11 H12 SING N N 34 S1K C10 H13 SING N N 35 S1K C9 H14 SING N N 36 S1K C8 H15 SING N N 37 S1K B O2 SING N N 38 S1K O2 H8 SING N N 39 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S1K InChI InChI 1.03 "InChI=1S/C16H15BO5/c18-16(19)9-15-13-8-12(6-7-14(13)17(20)22-15)21-10-11-4-2-1-3-5-11/h1-8,15,20H,9-10H2,(H,18,19)/t15-/m0/s1" S1K InChIKey InChI 1.03 HVZSXJPAWAMXTG-HNNXBMFYSA-N S1K SMILES_CANONICAL CACTVS 3.385 "OB1O[C@@H](CC(O)=O)c2cc(OCc3ccccc3)ccc12" S1K SMILES CACTVS 3.385 "OB1O[CH](CC(O)=O)c2cc(OCc3ccccc3)ccc12" S1K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B1(c2ccc(cc2[C@@H](O1)CC(=O)O)OCc3ccccc3)O" S1K SMILES "OpenEye OEToolkits" 2.0.7 "B1(c2ccc(cc2C(O1)CC(=O)O)OCc3ccccc3)O" # _pdbx_chem_comp_identifier.comp_id S1K _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[(3~{S})-1-oxidanyl-5-phenylmethoxy-3~{H}-2,1-benzoxaborol-3-yl]ethanoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id S1K _pdbx_chem_comp_synonyms.name "2-[(3S)-1-oxidanyl-5-phenylmethoxy-3H-2,1-benzoxaborol-3-yl]ethanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S1K "Create component" 2020-11-05 PDBE S1K "Initial release" 2021-08-11 RCSB ##