data_S3U # _chem_comp.id S3U _chem_comp.name "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-1-phenoxy-cyclohexane-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H25 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-09 _chem_comp.pdbx_modified_date 2023-07-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 419.539 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S3U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BXQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S3U C11 C1 C 0 1 Y N N -22.557 -23.499 5.167 -1.134 -1.314 2.311 C11 S3U 1 S3U C12 C2 C 0 1 Y N N -22.903 -23.157 3.861 0.050 -0.887 1.739 C12 S3U 2 S3U C02 C3 C 0 1 N N N -20.317 -16.496 7.098 -7.363 -0.094 0.093 C02 S3U 3 S3U C04 C4 C 0 1 Y N N -20.609 -17.991 7.131 -5.955 0.183 -0.231 C04 S3U 4 S3U C05 C5 C 0 1 Y N N -21.165 -18.734 6.060 -4.892 -0.249 0.481 C05 S3U 5 S3U C06 C6 C 0 1 Y N N -21.300 -20.184 6.491 -3.673 0.154 -0.044 C06 S3U 6 S3U C07 C7 C 0 1 Y N N -20.861 -20.404 7.822 -3.765 0.900 -1.163 C07 S3U 7 S3U C09 C8 C 0 1 Y N N -21.871 -21.249 5.569 -2.374 -0.206 0.576 C09 S3U 8 S3U C10 C9 C 0 1 Y N N -22.039 -22.541 6.029 -2.343 -0.980 1.735 C10 S3U 9 S3U C13 C10 C 0 1 Y N N -22.743 -21.851 3.442 0.029 -0.119 0.581 C13 S3U 10 S3U C15 C11 C 0 1 N N N -22.874 -22.283 0.933 2.303 0.549 0.784 C15 S3U 11 S3U C17 C12 C 0 1 N N N -23.162 -21.609 -0.424 3.579 1.066 0.171 C17 S3U 12 S3U C18 C13 C 0 1 N N N -23.603 -22.606 -1.496 4.740 0.838 1.141 C18 S3U 13 S3U C19 C14 C 0 1 N N N -23.620 -21.936 -2.868 6.036 1.363 0.519 C19 S3U 14 S3U C20 C15 C 0 1 N N N -22.288 -21.260 -3.214 5.895 2.860 0.235 C20 S3U 15 S3U C21 C16 C 0 1 N N N -21.811 -20.308 -2.125 4.734 3.087 -0.736 C21 S3U 16 S3U C22 C17 C 0 1 N N N -21.783 -21.051 -0.799 3.439 2.563 -0.113 C22 S3U 17 S3U C24 C18 C 0 1 Y N N -25.363 -20.668 -0.061 3.812 -0.987 -1.005 C24 S3U 18 S3U C25 C19 C 0 1 Y N N -25.878 -21.783 0.592 4.036 -1.725 -2.158 C25 S3U 19 S3U C26 C20 C 0 1 Y N N -27.258 -21.926 0.745 4.016 -3.106 -2.108 C26 S3U 20 S3U C27 C21 C 0 1 Y N N -28.103 -20.938 0.259 3.773 -3.752 -0.910 C27 S3U 21 S3U C28 C22 C 0 1 Y N N -27.581 -19.819 -0.379 3.548 -3.018 0.241 C28 S3U 22 S3U C29 C23 C 0 1 Y N N -26.205 -19.672 -0.525 3.567 -1.638 0.196 C29 S3U 23 S3U C30 C24 C 0 1 Y N N -22.202 -20.892 4.280 -1.182 0.220 -0.004 C30 S3U 24 S3U N01 N1 N 0 1 N N N -19.788 -15.916 8.310 -8.367 0.398 -0.716 N01 S3U 25 S3U N03 N2 N 0 1 N N N -20.538 -15.765 6.083 -7.663 -0.806 1.146 N03 S3U 26 S3U N14 N3 N 0 1 N N N -23.037 -21.398 2.084 1.229 0.312 0.005 N14 S3U 27 S3U O16 O1 O 0 1 N N N -22.500 -23.419 1.030 2.243 0.346 1.979 O16 S3U 28 S3U O23 O2 O 0 1 N N N -23.994 -20.463 -0.253 3.837 0.371 -1.051 O23 S3U 29 S3U S08 S1 S 0 1 Y N N -20.338 -18.978 8.411 -5.397 1.120 -1.609 S08 S3U 30 S3U H111 H1 H 0 0 N N N -22.692 -24.514 5.510 -1.112 -1.914 3.208 H111 S3U 31 S3U H121 H2 H 0 0 N N N -23.292 -23.904 3.185 0.994 -1.151 2.193 H121 S3U 32 S3U H051 H3 H 0 0 N N N -21.446 -18.335 5.097 -4.983 -0.851 1.373 H051 S3U 33 S3U H071 H4 H 0 0 N N N -20.872 -21.346 8.349 -2.921 1.299 -1.706 H071 S3U 34 S3U H101 H5 H 0 0 N N N -21.772 -22.802 7.042 -3.266 -1.319 2.182 H101 S3U 35 S3U H182 H6 H 0 0 N N N -24.613 -22.972 -1.258 4.544 1.368 2.073 H182 S3U 36 S3U H181 H7 H 0 0 N N N -22.901 -23.453 -1.514 4.840 -0.228 1.344 H181 S3U 37 S3U H192 H8 H 0 0 N N N -24.414 -21.175 -2.878 6.863 1.201 1.211 H192 S3U 38 S3U H191 H9 H 0 0 N N N -23.835 -22.700 -3.630 6.232 0.833 -0.413 H191 S3U 39 S3U H202 H10 H 0 0 N N N -21.525 -22.039 -3.359 5.699 3.390 1.167 H202 S3U 40 S3U H201 H11 H 0 0 N N N -22.414 -20.692 -4.148 6.818 3.234 -0.209 H201 S3U 41 S3U H212 H12 H 0 0 N N N -20.801 -19.947 -2.367 4.634 4.154 -0.938 H212 S3U 42 S3U H211 H13 H 0 0 N N N -22.499 -19.453 -2.055 4.930 2.557 -1.668 H211 S3U 43 S3U H222 H14 H 0 0 N N N -21.071 -21.886 -0.875 2.612 2.725 -0.805 H222 S3U 44 S3U H221 H15 H 0 0 N N N -21.454 -20.358 -0.011 3.243 3.093 0.819 H221 S3U 45 S3U H251 H16 H 0 0 N N N -25.210 -22.538 0.980 4.227 -1.221 -3.094 H251 S3U 46 S3U H261 H17 H 0 0 N N N -27.664 -22.797 1.237 4.191 -3.681 -3.005 H261 S3U 47 S3U H271 H18 H 0 0 N N N -29.172 -21.039 0.377 3.757 -4.831 -0.873 H271 S3U 48 S3U H281 H19 H 0 0 N N N -28.246 -19.060 -0.763 3.357 -3.525 1.175 H281 S3U 49 S3U H291 H20 H 0 0 N N N -25.798 -18.789 -0.996 3.392 -1.065 1.095 H291 S3U 50 S3U H301 H21 H 0 0 N N N -22.042 -19.883 3.930 -1.200 0.817 -0.903 H301 S3U 51 S3U H012 H22 H 0 0 N N N -19.632 -16.491 9.113 -8.144 0.927 -1.498 H012 S3U 52 S3U H031 H23 H 0 0 N N N -20.304 -14.808 6.253 -8.592 -0.988 1.360 H031 S3U 53 S3U H141 H25 H 0 0 N N N -23.357 -20.462 1.939 1.288 0.440 -0.954 H141 S3U 54 S3U H011 H26 H 0 0 N N N -19.578 -14.939 8.346 -9.295 0.216 -0.502 H011 S3U 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S3U C20 C19 SING N N 1 S3U C20 C21 SING N N 2 S3U C19 C18 SING N N 3 S3U C21 C22 SING N N 4 S3U C18 C17 SING N N 5 S3U C22 C17 SING N N 6 S3U C29 C28 DOUB Y N 7 S3U C29 C24 SING Y N 8 S3U C17 O23 SING N N 9 S3U C17 C15 SING N N 10 S3U C28 C27 SING Y N 11 S3U O23 C24 SING N N 12 S3U C24 C25 DOUB Y N 13 S3U C27 C26 DOUB Y N 14 S3U C25 C26 SING Y N 15 S3U C15 O16 DOUB N N 16 S3U C15 N14 SING N N 17 S3U N14 C13 SING N N 18 S3U C13 C12 DOUB Y N 19 S3U C13 C30 SING Y N 20 S3U C12 C11 SING Y N 21 S3U C30 C09 DOUB Y N 22 S3U C11 C10 DOUB Y N 23 S3U C09 C10 SING Y N 24 S3U C09 C06 SING N N 25 S3U C05 C06 SING Y N 26 S3U C05 C04 DOUB Y N 27 S3U N03 C02 DOUB N N 28 S3U C06 C07 DOUB Y N 29 S3U C02 C04 SING N N 30 S3U C02 N01 SING N N 31 S3U C04 S08 SING Y N 32 S3U C07 S08 SING Y N 33 S3U C11 H111 SING N N 34 S3U C12 H121 SING N N 35 S3U C05 H051 SING N N 36 S3U C07 H071 SING N N 37 S3U C10 H101 SING N N 38 S3U C18 H182 SING N N 39 S3U C18 H181 SING N N 40 S3U C19 H192 SING N N 41 S3U C19 H191 SING N N 42 S3U C20 H202 SING N N 43 S3U C20 H201 SING N N 44 S3U C21 H212 SING N N 45 S3U C21 H211 SING N N 46 S3U C22 H222 SING N N 47 S3U C22 H221 SING N N 48 S3U C25 H251 SING N N 49 S3U C26 H261 SING N N 50 S3U C27 H271 SING N N 51 S3U C28 H281 SING N N 52 S3U C29 H291 SING N N 53 S3U C30 H301 SING N N 54 S3U N01 H012 SING N N 55 S3U N03 H031 SING N N 56 S3U N14 H141 SING N N 57 S3U N01 H011 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S3U InChI InChI 1.06 "InChI=1S/C24H25N3O2S/c25-22(26)21-15-18(16-30-21)17-8-7-9-19(14-17)27-23(28)24(12-5-2-6-13-24)29-20-10-3-1-4-11-20/h1,3-4,7-11,14-16H,2,5-6,12-13H2,(H3,25,26)(H,27,28)" S3U InChIKey InChI 1.06 GDAOXESZCCHQMR-UHFFFAOYSA-N S3U SMILES_CANONICAL CACTVS 3.385 "NC(=N)c1scc(c1)c2cccc(NC(=O)C3(CCCCC3)Oc4ccccc4)c2" S3U SMILES CACTVS 3.385 "NC(=N)c1scc(c1)c2cccc(NC(=O)C3(CCCCC3)Oc4ccccc4)c2" S3U SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[H]/N=C(\c1cc(cs1)c2cccc(c2)NC(=O)C3(CCCCC3)Oc4ccccc4)/N" S3U SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)OC2(CCCCC2)C(=O)Nc3cccc(c3)c4cc(sc4)C(=N)N" # _pdbx_chem_comp_identifier.comp_id S3U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-1-phenoxy-cyclohexane-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S3U "Create component" 2022-12-09 PDBE S3U "Initial release" 2023-08-02 RCSB #