data_S55 # _chem_comp.id S55 _chem_comp.name "METHYL (2S,3R,4S)-3-ETHYL-2-(BETA-D-GLUCOPYRANOSYLOXY)-4-[(1S)-2,3,4,9-TETRAHYDRO-1H-BETA-CARBOLIN-1-YLMETHYL]-3,4-DIHYDRO-2H-PYRAN-5-CARBOXYLATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H36 N2 O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-01-26 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag ? _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 532.583 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S55 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S55 O24 O24 O 0 1 N N N 47.006 72.486 8.409 -3.828 -8.654 -2.830 O24 S55 1 S55 C21 C21 C 0 1 N N N 46.173 72.480 9.314 -3.122 -8.750 -1.838 C21 S55 2 S55 O22 O22 O 0 1 N N N 46.688 72.422 10.666 -2.749 -9.883 -1.192 O22 S55 3 S55 C23 C23 C 0 1 N N N 45.868 72.764 11.800 -3.250 -11.102 -1.752 C23 S55 4 S55 C20 C20 C 0 1 N N N 44.705 72.532 9.102 -2.532 -7.600 -1.149 C20 S55 5 S55 C19 C19 C 0 1 N N N 43.890 72.667 10.164 -1.365 -7.791 -0.524 C19 S55 6 S55 O18 O18 O 0 1 N N N 42.464 72.414 10.052 -0.649 -6.832 0.143 O18 S55 7 S55 C17 C17 C 0 1 N N S 41.764 72.607 8.825 -1.317 -5.576 0.332 C17 S55 8 S55 O27 O27 O 0 1 N N N 40.798 73.637 8.978 -0.342 -4.563 0.581 O27 S55 9 S55 C28 C28 C 0 1 N N S 39.500 73.157 9.231 0.463 -4.887 1.703 C28 S55 10 S55 O33 O33 O 0 1 N N N 39.518 71.911 8.567 -0.357 -5.025 2.861 O33 S55 11 S55 C32 C32 C 0 1 N N R 38.271 71.363 8.227 0.393 -5.375 4.026 C32 S55 12 S55 C33 C33 C 0 1 N N N 38.691 70.076 7.543 -0.600 -5.617 5.158 C33 S55 13 S55 O34 O34 O 0 1 N N N 40.118 69.918 7.693 -1.484 -6.652 4.768 O34 S55 14 S55 C31 C31 C 0 1 N N S 37.623 72.377 7.294 1.380 -4.256 4.367 C31 S55 15 S55 O35 O35 O 0 1 N N N 36.364 71.922 6.846 2.180 -4.655 5.478 O35 S55 16 S55 C30 C30 C 0 1 N N S 37.307 73.667 7.997 2.289 -3.952 3.175 C30 S55 17 S55 O36 O36 O 0 1 N N N 36.983 74.630 7.024 3.039 -2.767 3.443 O36 S55 18 S55 C29 C29 C 0 1 N N R 38.514 74.216 8.701 1.476 -3.758 1.895 C29 S55 19 S55 O37 O37 O 0 1 N N N 37.975 74.964 9.802 2.362 -3.715 0.777 O37 S55 20 S55 C16 C16 C 0 1 N N R 42.688 73.099 7.727 -2.157 -5.164 -0.896 C16 S55 21 S55 C25 C25 C 0 1 N N N 41.946 72.950 6.413 -2.771 -3.771 -0.738 C25 S55 22 S55 C26 C26 C 0 1 N N N 42.754 73.715 5.400 -3.496 -3.361 -1.995 C26 S55 23 S55 C15 C15 C 0 1 N N S 44.081 72.456 7.727 -3.205 -6.259 -1.223 C15 S55 24 S55 C14 C14 C 0 1 N N N 44.023 71.022 7.213 -4.436 -6.238 -0.310 C14 S55 25 S55 C13 C13 C 0 1 N N S 45.355 70.301 7.208 -5.446 -7.320 -0.697 C13 S55 26 S55 N12 N12 N 0 1 N N N 46.384 70.918 6.391 -5.886 -7.169 -2.105 N12 S55 27 S55 C11 C11 C 0 1 N N N 47.612 70.174 6.140 -6.934 -6.148 -2.290 C11 S55 28 S55 C10 C10 C 0 1 N N N 47.418 68.764 5.589 -8.225 -6.477 -1.511 C10 S55 29 S55 C7 C7 C 0 1 Y N N 45.994 68.324 5.841 -7.905 -6.923 -0.128 C7 S55 30 S55 C8 C8 C 0 1 Y N N 45.071 69.028 6.578 -6.629 -7.318 0.213 C8 S55 31 S55 C5 C5 C 0 1 Y N N 45.327 67.194 5.410 -8.722 -7.066 1.025 C5 S55 32 S55 C4 C4 C 0 1 Y N N 44.024 67.247 5.899 -7.900 -7.552 2.047 C4 S55 33 S55 N9 N9 N 0 1 Y N N 43.898 68.385 6.609 -6.632 -7.700 1.524 N9 S55 34 S55 C6 C6 C 0 1 Y N N 45.764 66.129 4.632 -10.084 -6.834 1.304 C6 S55 35 S55 C1 C1 C 0 1 Y N N 44.854 65.106 4.357 -10.573 -7.093 2.590 C1 S55 36 S55 C2 C2 C 0 1 Y N N 43.541 65.138 4.844 -9.730 -7.575 3.589 C2 S55 37 S55 C3 C3 C 0 1 Y N N 43.118 66.215 5.618 -8.376 -7.814 3.337 C3 S55 38 S55 H231 1H23 H 0 0 N N N 44.946 72.139 11.757 -3.653 -11.731 -0.955 H231 S55 39 S55 H232 2H23 H 0 0 N N N 45.461 73.788 11.632 -2.442 -11.625 -2.270 H232 S55 40 S55 H233 3H23 H 0 0 N N N 46.265 72.719 12.841 -4.044 -10.866 -2.464 H233 S55 41 S55 H19 H19 H 0 1 N N N 44.379 72.977 11.103 -0.835 -8.734 -0.499 H19 S55 42 S55 H15 H15 H 0 1 N N N 44.732 73.031 7.028 -3.554 -6.089 -2.250 H15 S55 43 S55 H17 H17 H 0 1 N N N 41.312 71.622 8.562 -1.944 -5.650 1.228 H17 S55 44 S55 H16 H16 H 0 1 N N N 42.931 74.172 7.909 -1.470 -5.097 -1.753 H16 S55 45 S55 H28 H28 H 0 1 N N N 39.185 73.002 10.289 0.967 -5.836 1.482 H28 S55 46 S55 H29 H29 H 0 1 N N N 39.120 74.814 7.980 0.961 -2.790 1.920 H29 S55 47 S55 H32 H32 H 0 1 N N N 37.538 71.157 9.041 0.927 -6.318 3.844 H32 S55 48 S55 H331 1H33 H 0 0 N N N 38.366 70.033 6.477 -1.172 -4.709 5.351 H331 S55 49 S55 H332 2H33 H 0 0 N N N 38.122 69.191 7.912 -0.069 -5.917 6.061 H332 S55 50 S55 H31 H31 H 0 1 N N N 38.357 72.518 6.466 0.838 -3.348 4.658 H31 S55 51 S55 H34 H34 H 0 1 N N N 40.381 69.112 7.265 -2.387 -6.340 4.948 H34 S55 52 S55 H35 H35 H 0 1 N N N 35.960 72.555 6.264 1.693 -5.362 5.928 H35 S55 53 S55 H30 H30 H 0 1 N N N 36.484 73.466 8.722 3.028 -4.752 3.046 H30 S55 54 S55 H36 H36 H 0 1 N N N 36.219 74.283 6.579 3.865 -3.055 3.860 H36 S55 55 S55 H37 H37 H 0 1 N N N 37.367 75.617 9.475 3.166 -4.183 1.047 H37 S55 56 S55 H251 1H25 H 0 0 N N N 40.878 73.267 6.464 -1.965 -3.081 -0.513 H251 S55 57 S55 H252 2H25 H 0 0 N N N 41.756 71.890 6.125 -3.450 -3.806 0.107 H252 S55 58 S55 H261 1H26 H 0 0 N N N 43.822 73.398 5.349 -2.821 -3.327 -2.856 H261 S55 59 S55 H262 2H26 H 0 0 N N N 42.944 74.775 5.688 -4.309 -4.053 -2.235 H262 S55 60 S55 H263 3H26 H 0 0 N N N 42.208 73.605 4.434 -3.924 -2.364 -1.856 H263 S55 61 S55 H141 1H14 H 0 0 N N N 43.562 70.992 6.198 -4.920 -5.260 -0.369 H141 S55 62 S55 H142 2H14 H 0 0 N N N 43.267 70.435 7.785 -4.126 -6.393 0.727 H142 S55 63 S55 H13 H13 H 0 1 N N N 45.741 70.278 8.254 -4.935 -8.287 -0.616 H13 S55 64 S55 H12 H12 H 0 1 N N N 46.622 71.826 6.789 -6.258 -8.064 -2.424 H12 S55 65 S55 H111 1H11 H 0 0 N N N 48.236 70.142 7.063 -7.167 -6.063 -3.357 H111 S55 66 S55 H112 2H11 H 0 0 N N N 48.284 70.759 5.469 -6.546 -5.170 -1.978 H112 S55 67 S55 H101 1H10 H 0 0 N N N 48.163 68.043 5.999 -8.768 -7.281 -2.024 H101 S55 68 S55 H102 2H10 H 0 0 N N N 47.701 68.687 4.513 -8.876 -5.596 -1.491 H102 S55 69 S55 H9 H9 H 0 1 N N N 43.123 68.965 6.288 -5.828 -8.035 2.038 H9 S55 70 S55 H6 H6 H 0 1 N N N 46.797 66.097 4.246 -10.754 -6.459 0.535 H6 S55 71 S55 H3 H3 H 0 1 N N N 42.084 66.250 6.001 -7.721 -8.191 4.116 H3 S55 72 S55 H1 H1 H 0 1 N N N 45.180 64.252 3.740 -11.622 -6.914 2.810 H1 S55 73 S55 H2 H2 H 0 1 N N N 42.841 64.316 4.618 -10.131 -7.769 4.581 H2 S55 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S55 O24 C21 DOUB N N 1 S55 C21 O22 SING N N 2 S55 C21 C20 SING N N 3 S55 O22 C23 SING N N 4 S55 C23 H231 SING N N 5 S55 C23 H232 SING N N 6 S55 C23 H233 SING N N 7 S55 C20 C15 SING N N 8 S55 C20 C19 DOUB N N 9 S55 C19 H19 SING N N 10 S55 C19 O18 SING N N 11 S55 O18 C17 SING N N 12 S55 C17 H17 SING N N 13 S55 C17 O27 SING N N 14 S55 C17 C16 SING N N 15 S55 O27 C28 SING N N 16 S55 C28 H28 SING N N 17 S55 C28 O33 SING N N 18 S55 C28 C29 SING N N 19 S55 O33 C32 SING N N 20 S55 C32 H32 SING N N 21 S55 C32 C33 SING N N 22 S55 C32 C31 SING N N 23 S55 C33 H331 SING N N 24 S55 C33 H332 SING N N 25 S55 C33 O34 SING N N 26 S55 O34 H34 SING N N 27 S55 C31 H31 SING N N 28 S55 C31 O35 SING N N 29 S55 C31 C30 SING N N 30 S55 O35 H35 SING N N 31 S55 C30 H30 SING N N 32 S55 C30 O36 SING N N 33 S55 C30 C29 SING N N 34 S55 O36 H36 SING N N 35 S55 C29 H29 SING N N 36 S55 C29 O37 SING N N 37 S55 O37 H37 SING N N 38 S55 C16 C15 SING N N 39 S55 C16 H16 SING N N 40 S55 C16 C25 SING N N 41 S55 C25 H251 SING N N 42 S55 C25 H252 SING N N 43 S55 C25 C26 SING N N 44 S55 C26 H261 SING N N 45 S55 C26 H262 SING N N 46 S55 C26 H263 SING N N 47 S55 C15 C14 SING N N 48 S55 C15 H15 SING N N 49 S55 C14 C13 SING N N 50 S55 C14 H141 SING N N 51 S55 C14 H142 SING N N 52 S55 C13 N12 SING N N 53 S55 C13 C8 SING N N 54 S55 C13 H13 SING N N 55 S55 N12 C11 SING N N 56 S55 N12 H12 SING N N 57 S55 C11 C10 SING N N 58 S55 C11 H111 SING N N 59 S55 C11 H112 SING N N 60 S55 C10 C7 SING N N 61 S55 C10 H101 SING N N 62 S55 C10 H102 SING N N 63 S55 C7 C8 DOUB Y N 64 S55 C7 C5 SING Y N 65 S55 C8 N9 SING Y N 66 S55 C5 C4 SING Y N 67 S55 C5 C6 DOUB Y N 68 S55 C4 N9 SING Y N 69 S55 C4 C3 DOUB Y N 70 S55 N9 H9 SING N N 71 S55 C6 C1 SING Y N 72 S55 C6 H6 SING N N 73 S55 C1 C2 DOUB Y N 74 S55 C1 H1 SING N N 75 S55 C2 C3 SING Y N 76 S55 C2 H2 SING N N 77 S55 C3 H3 SING N N 78 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S55 SMILES ACDLabs 10.04 "O=C(OC)C2=COC(OC1OC(C(O)C(O)C1O)CO)C(CC)C2CC5c4nc3ccccc3c4CCN5" S55 SMILES_CANONICAL CACTVS 3.341 "CC[C@@H]1[C@H](C[C@@H]2NCCc3c2[nH]c4ccccc34)C(=CO[C@H]1O[C@@H]5O[C@H](CO)[C@@H](O)[C@H](O)[C@H]5O)C(=O)OC" S55 SMILES CACTVS 3.341 "CC[CH]1[CH](C[CH]2NCCc3c2[nH]c4ccccc34)C(=CO[CH]1O[CH]5O[CH](CO)[CH](O)[CH](O)[CH]5O)C(=O)OC" S55 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC[C@@H]1[C@@H](C(=CO[C@H]1O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)C(=O)OC)C[C@H]3c4c(c5ccccc5[nH]4)CCN3" S55 SMILES "OpenEye OEToolkits" 1.5.0 "CCC1C(C(=COC1OC2C(C(C(C(O2)CO)O)O)O)C(=O)OC)CC3c4c(c5ccccc5[nH]4)CCN3" S55 InChI InChI 1.03 "InChI=1S/C27H36N2O9/c1-3-13-16(10-19-21-15(8-9-28-19)14-6-4-5-7-18(14)29-21)17(25(34)35-2)12-36-26(13)38-27-24(33)23(32)22(31)20(11-30)37-27/h4-7,12-13,16,19-20,22-24,26-33H,3,8-11H2,1-2H3/t13-,16+,19+,20-,22-,23+,24-,26+,27+/m1/s1" S55 InChIKey InChI 1.03 HZZMXWZOTXPILK-NTXHKPOFSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier S55 "SYSTEMATIC NAME" ACDLabs 10.04 "methyl (2S,3R,4S)-3-ethyl-2-(beta-D-glucopyranosyloxy)-4-[(1S)-2,3,4,9-tetrahydro-1H-beta-carbolin-1-ylmethyl]-3,4-dihydro-2H-pyran-5-carboxylate" S55 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "methyl (4S,5R,6S)-5-ethyl-4-[[(1S)-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indol-1-yl]methyl]-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5,6-dihydro-4H-pyran-3-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S55 "Create component" 2007-01-26 PDBJ S55 "Modify descriptor" 2011-06-04 RCSB #