data_S5Q # _chem_comp.id S5Q _chem_comp.name "FeFe cofactor" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C Fe8 S9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge -4 _chem_comp.pdbx_initial_date 2022-12-13 _chem_comp.pdbx_modified_date 2023-06-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 747.356 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S5Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BOQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S5Q S4B S1 S -1 1 N N N -13.321 1.578 52.755 -2.713 1.138 1.230 S4B S5Q 1 S5Q FE8 FE1 FE 0 0 N N N -14.067 1.849 50.550 -3.969 0.050 -0.218 FE8 S5Q 2 S5Q FE5 FE2 FE 0 0 N N N -15.380 2.305 53.074 -1.178 -0.322 1.519 FE5 S5Q 3 S5Q S3A S2 S 0 1 N N N -15.865 3.419 54.975 0.187 -1.068 3.064 S3A S5Q 4 S5Q FE7 FE3 FE 0 0 N N N -14.654 -0.166 52.475 -1.186 1.391 -0.343 FE7 S5Q 5 S5Q S5A S3 S 0 1 N N N -14.340 -2.054 53.699 0.036 3.229 -0.403 S5A S5Q 6 S5Q S3B S4 S -1 1 N N N -15.150 -0.226 50.266 -2.475 0.451 -1.763 S3B S5Q 7 S5Q FE6 FE4 FE 0 0 N N N -16.749 0.889 51.306 -1.203 -1.095 -0.962 FE6 S5Q 8 S5Q S2B S5 S 0 1 N N N -18.816 0.244 51.099 0.090 -2.599 -1.915 S2B S5Q 9 S5Q S1B S6 S -1 1 N N N -16.044 2.984 51.044 -2.711 -1.566 0.548 S1B S5Q 10 S5Q CX C1 C 2 1 N N N -16.375 0.584 53.272 0.154 -0.034 0.096 CX S5Q 11 S5Q FE4 FE5 FE 0 0 N N N -16.929 1.473 54.953 1.540 -0.542 1.407 FE4 S5Q 12 S5Q S1A S7 S -1 1 N N N -19.227 1.363 54.868 3.021 -1.699 0.298 S1A S5Q 13 S5Q S4A S8 S -1 1 N N N -16.198 -0.031 56.558 2.809 1.301 1.383 S4A S5Q 14 S5Q FE1 FE6 FE 0 0 N N N -18.316 -0.533 55.879 2.746 0.164 -0.213 FE1 S5Q 15 S5Q FE3 FE7 FE 0 0 N N N -16.147 -0.988 54.496 1.398 1.466 -0.316 FE3 S5Q 16 S5Q S2A S9 S -1 1 N N N -18.187 -1.977 54.173 2.465 0.651 -2.063 S2A S5Q 17 S5Q FE2 FE8 FE 0 0 N N N -18.295 0.093 53.250 1.412 -1.013 -1.113 FE2 S5Q 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S5Q S4B FE8 SING N N 1 S5Q S4B FE5 SING N N 2 S5Q S4B FE7 SING N N 3 S5Q FE8 S3B SING N N 4 S5Q FE8 S1B SING N N 5 S5Q FE5 S3A SING N N 6 S5Q FE5 S1B SING N N 7 S5Q FE5 CX SING N N 8 S5Q S3A FE4 SING N N 9 S5Q FE7 S5A SING N N 10 S5Q FE7 S3B SING N N 11 S5Q FE7 CX SING N N 12 S5Q S5A FE3 SING N N 13 S5Q S3B FE6 SING N N 14 S5Q FE6 S2B SING N N 15 S5Q FE6 S1B SING N N 16 S5Q FE6 CX SING N N 17 S5Q S2B FE2 SING N N 18 S5Q CX FE4 SING N N 19 S5Q CX FE3 SING N N 20 S5Q CX FE2 SING N N 21 S5Q FE4 S1A SING N N 22 S5Q FE4 S4A SING N N 23 S5Q S1A FE1 SING N N 24 S5Q S1A FE2 SING N N 25 S5Q S4A FE1 SING N N 26 S5Q S4A FE3 SING N N 27 S5Q FE1 S2A SING N N 28 S5Q FE3 S2A SING N N 29 S5Q S2A FE2 SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S5Q InChI InChI 1.06 InChI=1S/C.8Fe.9S/q+2;;;;;;;;;;;;6*-1 S5Q InChIKey InChI 1.06 ARHQIUGQOSHZFD-UHFFFAOYSA-N S5Q SMILES_CANONICAL CACTVS 3.385 "S1[Fe]23[S-]4[Fe]5[S-]2[Fe]67S[Fe]89[S-]%10[Fe]%11[S-]%12[Fe]1%10[C++]368%13[Fe]4(S[Fe]%12%13[S-]9%11)[S-]57" S5Q SMILES CACTVS 3.385 "S1[Fe]23[S-]4[Fe]5[S-]2[Fe]67S[Fe]89[S-]%10[Fe]%11[S-]%12[Fe]1%10[C++]368%13[Fe]4(S[Fe]%12%13[S-]9%11)[S-]57" S5Q SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[C+2]12345[Fe]67S[Fe]18[S-]9[Fe]21S[Fe]32[S-]6[Fe]3[S-]7[Fe]4([S-]23)S[Fe]52[S-]8[Fe]9[S-]12" S5Q SMILES "OpenEye OEToolkits" 3.1.0.0 "[C+2]12345[Fe]67S[Fe]18[S-]9[Fe]21S[Fe]32[S-]6[Fe]3[S-]7[Fe]4([S-]23)S[Fe]52[S-]8[Fe]9[S-]12" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S5Q "Create component" 2022-12-13 PDBE S5Q "Initial release" 2023-06-14 RCSB #