data_S5W # _chem_comp.id S5W _chem_comp.name "Macrocyclic SAFit analogue 55" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C41 H51 N O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-10 _chem_comp.pdbx_modified_date 2021-03-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 701.845 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S5W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AWX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S5W CAD C1 C 0 1 N N N 18.809 20.073 10.105 5.733 -2.593 0.768 CAD S5W 1 S5W CAE C2 C 0 1 N N N 20.049 19.646 9.513 6.686 -3.515 0.006 CAE S5W 2 S5W CAI C3 C 0 1 N N N 20.302 20.456 8.279 6.982 -2.917 -1.371 CAI S5W 3 S5W CAH C4 C 0 1 N N N 20.686 21.857 8.598 5.676 -2.771 -2.155 CAH S5W 4 S5W CAF C5 C 0 1 N N N 19.982 22.266 9.875 4.723 -1.849 -1.393 CAF S5W 5 S5W CBN C6 C 0 1 N N N 18.652 21.595 10.040 4.427 -2.447 -0.016 CBN S5W 6 S5W CBO C7 C 0 1 N N S 17.920 22.164 11.326 3.474 -1.525 0.747 CBO S5W 7 S5W CAA C8 C 0 1 N N N 16.610 21.608 11.440 2.069 -1.687 0.230 CAA S5W 8 S5W OAB O1 O 0 1 N N N 16.068 21.112 10.450 1.606 -0.795 -0.450 OAB S5W 9 S5W N N1 N 0 1 N N N 15.898 21.622 12.580 1.303 -2.750 0.472 N S5W 10 S5W CBR C9 C 0 1 N N N 16.475 22.191 13.797 1.823 -3.932 1.162 CBR S5W 11 S5W CBF C10 C 0 1 N N N 15.706 21.917 15.052 1.556 -5.195 0.356 CBF S5W 12 S5W CBM C11 C 0 1 N N N 14.349 21.201 14.884 0.191 -5.184 -0.314 CBM S5W 13 S5W CB C12 C 0 1 N N N 14.424 20.214 13.832 -0.720 -4.107 0.272 CB S5W 14 S5W CA C13 C 0 1 N N S 14.554 20.998 12.583 -0.097 -2.727 0.021 CA S5W 15 S5W C C14 C 0 1 N N N 13.507 21.932 12.453 -0.855 -1.671 0.775 C S5W 16 S5W O O2 O 0 1 N N N 12.365 21.495 12.303 -1.298 -1.941 1.866 O S5W 17 S5W OBL O3 O 0 1 N N N 13.847 23.283 12.423 -1.057 -0.442 0.282 OBL S5W 18 S5W CBK C15 C 0 1 N N R 12.746 24.280 12.593 -1.831 0.484 1.081 CBK S5W 19 S5W CBH C16 C 0 1 N N N 12.352 24.925 11.255 -3.293 0.032 1.088 CBH S5W 20 S5W CBG C17 C 0 1 N N N 10.884 25.343 11.372 -3.796 -0.091 -0.352 CBG S5W 21 S5W CBE C18 C 0 1 Y N N 10.201 25.074 9.989 -5.267 -0.416 -0.344 CBE S5W 22 S5W CAS C19 C 0 1 Y N N 10.469 25.893 8.898 -6.199 0.604 -0.350 CAS S5W 23 S5W CBA C20 C 0 1 Y N N 9.293 24.021 9.833 -5.682 -1.735 -0.337 CBA S5W 24 S5W CAW C21 C 0 1 Y N N 8.664 23.756 8.612 -7.030 -2.039 -0.330 CAW S5W 25 S5W CAT C22 C 0 1 Y N N 8.943 24.573 7.522 -7.970 -1.021 -0.331 CAT S5W 26 S5W OAO O4 O 0 1 N N N 8.400 24.391 6.276 -9.297 -1.318 -0.324 OAO S5W 27 S5W CAM C23 C 0 1 N N N 7.078 23.825 6.191 -9.652 -2.702 -0.311 CAM S5W 28 S5W CAU C24 C 0 1 Y N N 9.838 25.643 7.663 -7.552 0.307 -0.343 CAU S5W 29 S5W OAK O5 O 0 1 N N N 10.043 26.405 6.529 -8.471 1.310 -0.343 OAK S5W 30 S5W CAJ C25 C 0 1 N N N 11.258 27.183 6.529 -7.970 2.648 -0.357 CAJ S5W 31 S5W CBI C26 C 0 1 Y N N 13.176 25.281 13.491 -1.758 1.891 0.552 CBI S5W 32 S5W CBC C27 C 0 1 Y N N 14.435 25.869 13.361 -0.539 2.492 0.305 CBC S5W 33 S5W CAY C28 C 0 1 Y N N 12.378 25.704 14.558 -2.931 2.593 0.324 CAY S5W 34 S5W CAZ C29 C 0 1 Y N N 12.827 26.697 15.468 -2.886 3.884 -0.168 CAZ S5W 35 S5W CBD C30 C 0 1 Y N N 14.082 27.264 15.330 -1.669 4.479 -0.432 CBD S5W 36 S5W CBB C31 C 0 1 Y N N 14.882 26.846 14.267 -0.490 3.784 -0.194 CBB S5W 37 S5W OAR O6 O 0 1 N N N 16.110 27.408 14.108 0.689 4.393 -0.465 OAR S5W 38 S5W CAP C32 C 0 1 N N N 16.023 28.230 12.918 1.910 3.700 -0.233 CAP S5W 39 S5W CAV C33 C 0 1 N N N 17.394 28.500 12.306 3.089 4.588 -0.646 CAV S5W 40 S5W OBP O7 O 0 1 N N N 17.669 27.717 11.115 4.322 3.951 -0.285 OBP S5W 41 S5W CBY C34 C 0 1 Y N N 17.765 26.371 11.233 4.225 2.618 -0.018 CBY S5W 42 S5W CBV C35 C 0 1 Y N N 16.969 25.660 10.376 4.185 2.157 1.295 CBV S5W 43 S5W OAX O8 O 0 1 N N N 16.198 26.484 9.599 4.347 3.027 2.327 OAX S5W 44 S5W CAQ C36 C 0 1 N N N 15.519 25.964 8.435 4.295 2.484 3.648 CAQ S5W 45 S5W CBU C37 C 0 1 Y N N 17.007 24.254 10.410 3.981 0.806 1.549 CBU S5W 46 S5W CBT C38 C 0 1 Y N N 17.873 23.586 11.298 3.840 -0.077 0.500 CBT S5W 47 S5W CBW C39 C 0 1 Y N N 18.696 24.346 12.135 3.985 0.362 -0.804 CBW S5W 48 S5W CBX C40 C 0 1 Y N N 18.640 25.740 12.116 4.177 1.706 -1.068 CBX S5W 49 S5W OAN O9 O 0 1 N N N 19.425 26.531 12.909 4.318 2.135 -2.351 OAN S5W 50 S5W CAL C41 C 0 1 N N N 19.182 26.386 14.330 4.259 1.143 -3.378 CAL S5W 51 S5W HAE H1 H 0 1 N N N 17.974 19.604 9.564 5.522 -3.019 1.749 HAE S5W 52 S5W HAD H2 H 0 1 N N N 18.788 19.756 11.158 6.195 -1.613 0.890 HAD S5W 53 S5W HAF H3 H 0 1 N N N 19.984 18.580 9.248 7.616 -3.619 0.564 HAF S5W 54 S5W HAG H4 H 0 1 N N N 20.871 19.797 10.228 6.224 -4.495 -0.116 HAG S5W 55 S5W HAO H5 H 0 1 N N N 19.386 20.469 7.670 7.444 -1.937 -1.250 HAO S5W 56 S5W HAN H6 H 0 1 N N N 21.116 19.987 7.707 7.661 -3.574 -1.914 HAN S5W 57 S5W HAL H7 H 0 1 N N N 21.775 21.921 8.737 5.887 -2.345 -3.136 HAL S5W 58 S5W HAM H8 H 0 1 N N N 20.381 22.522 7.776 5.214 -3.751 -2.277 HAM S5W 59 S5W HAH H9 H 0 1 N N N 20.620 21.999 10.730 5.186 -0.869 -1.271 HAH S5W 60 S5W HAI H10 H 0 1 N N N 19.828 23.355 9.859 3.793 -1.745 -1.951 HAI S5W 61 S5W HBO H11 H 0 1 N N N 18.027 21.838 9.168 3.965 -3.427 -0.137 HBO S5W 62 S5W HBP H12 H 0 1 N N N 18.514 21.847 12.196 3.510 -1.747 1.813 HBP S5W 63 S5W HBS H13 H 0 1 N N N 17.487 21.778 13.920 2.897 -3.820 1.305 HBS S5W 64 S5W HBR H14 H 0 1 N N N 16.538 23.281 13.667 1.340 -4.020 2.135 HBR S5W 65 S5W HBF H15 H 0 1 N N N 16.336 21.291 15.701 2.324 -5.292 -0.411 HBF S5W 66 S5W HBG H16 H 0 1 N N N 15.516 22.882 15.545 1.613 -6.056 1.023 HBG S5W 67 S5W HBN H17 H 0 1 N N N 13.577 21.943 14.630 0.320 -4.999 -1.380 HBN S5W 68 S5W HBM H18 H 0 1 N N N 14.083 20.704 15.828 -0.280 -6.158 -0.177 HBM S5W 69 S5W HB2 H19 H 0 1 N N N 13.511 19.601 13.811 -1.698 -4.157 -0.207 HB2 S5W 70 S5W HB1 H20 H 0 1 N N N 15.300 19.563 13.973 -0.831 -4.267 1.344 HB1 S5W 71 S5W HA H21 H 0 1 N N N 14.508 20.295 11.738 -0.116 -2.515 -1.049 HA S5W 72 S5W HBL H22 H 0 1 N N N 11.863 23.766 13.000 -1.454 0.471 2.103 HBL S5W 73 S5W HBK H23 H 0 1 N N N 12.474 24.200 10.436 -3.371 -0.935 1.584 HBK S5W 74 S5W HBJ H24 H 0 1 N N N 12.981 25.806 11.061 -3.897 0.765 1.622 HBJ S5W 75 S5W HBI H25 H 0 1 N N N 10.818 26.412 11.621 -3.635 0.852 -0.875 HBI S5W 76 S5W HBH H26 H 0 1 N N N 10.388 24.752 12.156 -3.250 -0.886 -0.860 HBH S5W 77 S5W HA2 H27 H 0 1 N N N 11.159 26.718 8.997 -5.873 1.634 -0.360 HA2 S5W 78 S5W HBA H28 H 0 1 N N N 9.071 23.393 10.683 -4.950 -2.530 -0.337 HBA S5W 79 S5W HA5 H29 H 0 1 N N N 7.973 22.931 8.518 -7.352 -3.070 -0.324 HA5 S5W 80 S5W HAU H30 H 0 1 N N N 6.782 23.741 5.135 -9.247 -3.189 -1.198 HAU S5W 81 S5W HAV H31 H 0 1 N N N 7.076 22.826 6.652 -9.241 -3.174 0.582 HAV S5W 82 S5W HAW H32 H 0 1 N N N 6.366 24.475 6.721 -10.738 -2.799 -0.307 HAW S5W 83 S5W HAJ H33 H 0 1 N N N 11.330 27.751 5.590 -8.805 3.349 -0.356 HAJ S5W 84 S5W HAP H34 H 0 1 N N N 11.247 27.880 7.380 -7.354 2.815 0.527 HAP S5W 85 S5W HAQ H35 H 0 1 N N N 12.124 26.510 6.618 -7.368 2.802 -1.253 HAQ S5W 86 S5W HBC H36 H 0 1 N N N 15.079 25.567 12.548 0.377 1.954 0.500 HBC S5W 87 S5W HA6 H37 H 0 1 N N N 11.400 25.266 14.693 -3.884 2.130 0.531 HA6 S5W 88 S5W HA7 H38 H 0 1 N N N 12.183 27.013 16.276 -3.803 4.426 -0.345 HA7 S5W 89 S5W HBD H39 H 0 1 N N N 14.433 28.011 16.027 -1.633 5.485 -0.822 HBD S5W 90 S5W HAY H40 H 0 1 N N N 15.558 29.191 13.184 1.994 3.456 0.826 HAY S5W 91 S5W HAX H41 H 0 1 N N N 15.398 27.713 12.175 1.924 2.782 -0.820 HAX S5W 92 S5W HA4 H42 H 0 1 N N N 18.162 28.267 13.059 3.064 4.745 -1.725 HA4 S5W 93 S5W HA3 H43 H 0 1 N N N 17.452 29.566 12.041 3.014 5.549 -0.138 HA3 S5W 94 S5W HAZ H44 H 0 1 N N N 14.956 26.773 7.947 4.438 3.283 4.376 HAZ S5W 95 S5W HA0 H45 H 0 1 N N N 16.259 25.556 7.731 3.325 2.014 3.810 HA0 S5W 96 S5W HA1 H46 H 0 1 N N N 14.825 25.167 8.741 5.083 1.740 3.766 HA1 S5W 97 S5W HBU H47 H 0 1 N N N 16.369 23.684 9.752 3.933 0.449 2.567 HBU S5W 98 S5W HBW H48 H 0 1 N N N 19.383 23.848 12.804 3.949 -0.347 -1.619 HBW S5W 99 S5W HAT H49 H 0 1 N N N 19.854 27.055 14.888 5.054 0.414 -3.225 HAT S5W 100 S5W HAR H50 H 0 1 N N N 18.137 26.648 14.552 3.292 0.641 -3.342 HAR S5W 101 S5W HAS H51 H 0 1 N N N 19.371 25.345 14.630 4.385 1.619 -4.350 HAS S5W 102 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S5W CAM OAO SING N N 1 S5W OAO CAT SING N N 2 S5W CAJ OAK SING N N 3 S5W OAK CAU SING N N 4 S5W CAT CAU DOUB Y N 5 S5W CAT CAW SING Y N 6 S5W CAU CAS SING Y N 7 S5W CAI CAH SING N N 8 S5W CAI CAE SING N N 9 S5W CAQ OAX SING N N 10 S5W CAH CAF SING N N 11 S5W CAW CBA DOUB Y N 12 S5W CAS CBE DOUB Y N 13 S5W CAE CAD SING N N 14 S5W OAX CBV SING N N 15 S5W CBA CBE SING Y N 16 S5W CAF CBN SING N N 17 S5W CBE CBG SING N N 18 S5W CBN CAD SING N N 19 S5W CBN CBO SING N N 20 S5W CBV CBU DOUB Y N 21 S5W CBV CBY SING Y N 22 S5W CBU CBT SING Y N 23 S5W OAB CAA DOUB N N 24 S5W OBP CBY SING N N 25 S5W OBP CAV SING N N 26 S5W CBY CBX DOUB Y N 27 S5W CBH CBG SING N N 28 S5W CBH CBK SING N N 29 S5W CBT CBO SING N N 30 S5W CBT CBW DOUB Y N 31 S5W CBO CAA SING N N 32 S5W CAA N SING N N 33 S5W CBX CBW SING Y N 34 S5W CBX OAN SING N N 35 S5W O C DOUB N N 36 S5W CAV CAP SING N N 37 S5W OBL C SING N N 38 S5W OBL CBK SING N N 39 S5W C CA SING N N 40 S5W N CA SING N N 41 S5W N CBR SING N N 42 S5W CA CB SING N N 43 S5W CBK CBI SING N N 44 S5W OAN CAL SING N N 45 S5W CAP OAR SING N N 46 S5W CBC CBI DOUB Y N 47 S5W CBC CBB SING Y N 48 S5W CBI CAY SING Y N 49 S5W CBR CBF SING N N 50 S5W CB CBM SING N N 51 S5W OAR CBB SING N N 52 S5W CBB CBD DOUB Y N 53 S5W CAY CAZ DOUB Y N 54 S5W CBM CBF SING N N 55 S5W CBD CAZ SING Y N 56 S5W CAD HAE SING N N 57 S5W CAD HAD SING N N 58 S5W CAE HAF SING N N 59 S5W CAE HAG SING N N 60 S5W CAI HAO SING N N 61 S5W CAI HAN SING N N 62 S5W CAH HAL SING N N 63 S5W CAH HAM SING N N 64 S5W CAF HAH SING N N 65 S5W CAF HAI SING N N 66 S5W CBN HBO SING N N 67 S5W CBO HBP SING N N 68 S5W CBR HBS SING N N 69 S5W CBR HBR SING N N 70 S5W CBF HBF SING N N 71 S5W CBF HBG SING N N 72 S5W CBM HBN SING N N 73 S5W CBM HBM SING N N 74 S5W CB HB2 SING N N 75 S5W CB HB1 SING N N 76 S5W CA HA SING N N 77 S5W CBK HBL SING N N 78 S5W CBH HBK SING N N 79 S5W CBH HBJ SING N N 80 S5W CBG HBI SING N N 81 S5W CBG HBH SING N N 82 S5W CAS HA2 SING N N 83 S5W CBA HBA SING N N 84 S5W CAW HA5 SING N N 85 S5W CAM HAU SING N N 86 S5W CAM HAV SING N N 87 S5W CAM HAW SING N N 88 S5W CAJ HAJ SING N N 89 S5W CAJ HAP SING N N 90 S5W CAJ HAQ SING N N 91 S5W CBC HBC SING N N 92 S5W CAY HA6 SING N N 93 S5W CAZ HA7 SING N N 94 S5W CBD HBD SING N N 95 S5W CAP HAY SING N N 96 S5W CAP HAX SING N N 97 S5W CAV HA4 SING N N 98 S5W CAV HA3 SING N N 99 S5W CAQ HAZ SING N N 100 S5W CAQ HA0 SING N N 101 S5W CAQ HA1 SING N N 102 S5W CBU HBU SING N N 103 S5W CBW HBW SING N N 104 S5W CAL HAT SING N N 105 S5W CAL HAR SING N N 106 S5W CAL HAS SING N N 107 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S5W InChI InChI 1.03 "InChI=1S/C41H51NO9/c1-45-34-19-17-27(23-35(34)46-2)16-18-33-29-13-10-14-31(24-29)49-21-22-50-39-36(47-3)25-30(26-37(39)48-4)38(28-11-6-5-7-12-28)40(43)42-20-9-8-15-32(42)41(44)51-33/h10,13-14,17,19,23-26,28,32-33,38H,5-9,11-12,15-16,18,20-22H2,1-4H3/t32-,33+,38-/m0/s1" S5W InChIKey InChI 1.03 HANZAPZKUAFCGC-YGCWAPBFSA-N S5W SMILES_CANONICAL CACTVS 3.385 "COc1ccc(CC[C@H]2OC(=O)[C@@H]3CCCCN3C(=O)[C@@H](C4CCCCC4)c5cc(OC)c(OCCOc6cccc2c6)c(OC)c5)cc1OC" S5W SMILES CACTVS 3.385 "COc1ccc(CC[CH]2OC(=O)[CH]3CCCCN3C(=O)[CH](C4CCCCC4)c5cc(OC)c(OCCOc6cccc2c6)c(OC)c5)cc1OC" S5W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)CC[C@@H]2c3cccc(c3)OCCOc4c(cc(cc4OC)[C@@H](C(=O)N5CCCC[C@H]5C(=O)O2)C6CCCCC6)OC" S5W SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cc1OC)CCC2c3cccc(c3)OCCOc4c(cc(cc4OC)C(C(=O)N5CCCCC5C(=O)O2)C6CCCCC6)OC" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S5W "Create component" 2020-11-10 PDBE S5W "Initial release" 2021-03-17 RCSB ##