data_S6K # _chem_comp.id S6K _chem_comp.name "1-{[(3'S,4'R)-6-chloro-1'-(isoquinolin-4-yl)-4'-methyl-2'-oxo-1H-spiro[isoquinoline-4,3'-pyrrolidine]-2(3H)-sulfonyl]methyl}cyclopropane-1-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H25 Cl N4 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-22 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 521.030 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S6K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GNS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S6K N1 N1 N 0 1 N N N N N N -21.509 6.258 30.597 -2.012 -0.959 -0.471 N1 S6K 1 S6K N3 N2 N 0 1 Y N N N N N -16.862 3.319 25.967 4.417 1.698 2.111 N3 S6K 2 S6K C4 C1 C 0 1 N N S N N N -21.708 4.235 29.243 0.345 -1.037 -1.032 C4 S6K 3 S6K C5 C2 C 0 1 N N N N N N -22.166 5.705 29.403 -1.039 -0.641 -1.531 C5 S6K 4 S6K C6 C3 C 0 1 N N N N N N -21.984 5.653 31.849 -2.168 -2.370 -0.102 C6 S6K 5 S6K C7 C4 C 0 1 Y N N N N N -21.968 4.139 31.764 -0.812 -3.016 0.034 C7 S6K 6 S6K C8 C5 C 0 1 Y N N N N N -22.046 3.396 32.942 -0.747 -4.273 0.619 C8 S6K 7 S6K C10 C6 C 0 1 Y N N N N N -21.978 1.369 31.701 1.623 -4.304 0.320 C10 S6K 8 S6K C13 C7 C 0 1 N N N N N N -19.011 7.338 30.390 -4.466 0.260 -0.617 C13 S6K 9 S6K C15 C8 C 0 1 N N N N N N -17.028 8.787 29.391 -6.835 1.364 -0.507 C15 S6K 10 S6K C17 C9 C 0 1 N N N N N N -17.384 8.541 31.873 -4.831 2.381 0.733 C17 S6K 11 S6K C20 C10 C 0 1 Y N N N N N -16.380 4.498 25.590 4.473 2.974 1.812 C20 S6K 12 S6K C21 C11 C 0 1 Y N N N N N -17.053 5.735 25.786 3.734 3.480 0.731 C21 S6K 13 S6K C22 C12 C 0 1 Y N N N N N -16.504 6.985 25.401 3.766 4.838 0.378 C22 S6K 14 S6K C24 C13 C 0 1 Y N N N N N -18.443 8.121 26.227 2.240 4.394 -1.420 C24 S6K 15 S6K C26 C14 C 0 1 Y N N N N N -18.332 5.703 26.416 2.931 2.585 -0.023 C26 S6K 16 S6K N2 N3 N 0 1 N N N N N N -16.903 8.573 32.905 -4.361 3.291 1.223 N2 S6K 17 S6K C14 C15 C 0 1 N N N N N N -17.969 8.445 30.528 -5.439 1.200 0.097 C14 S6K 18 S6K C16 C16 C 0 1 N N N N N N -18.115 9.733 29.743 -6.651 0.571 0.788 C16 S6K 19 S6K S S1 S 0 1 N N N N N N -20.748 7.700 30.577 -2.888 0.229 0.278 S S6K 20 S6K O1 O1 O 0 1 N N N N N N -21.188 8.391 29.407 -3.075 -0.254 1.601 O1 S6K 21 S6K O2 O2 O 0 1 N N N N N N -20.947 8.301 31.857 -2.151 1.418 0.030 O2 S6K 22 S6K C12 C17 C 0 1 Y N N N N N -21.893 3.461 30.533 0.342 -2.401 -0.402 C12 S6K 23 S6K C11 C18 C 0 1 Y N N N N N -21.926 2.068 30.512 1.560 -3.052 -0.259 C11 S6K 24 S6K CL CL1 CL 0 0 N N N N N N -21.908 -0.373 31.658 3.153 -5.107 0.492 CL S6K 25 S6K C9 C19 C 0 1 Y N N N N N -22.042 2.013 32.916 0.465 -4.916 0.764 C9 S6K 26 S6K C1 C20 C 0 1 N N R N N N -22.248 3.546 27.955 1.350 -1.007 -2.203 C1 S6K 27 S6K C C21 C 0 1 N N N N N N -23.740 3.716 27.685 0.881 -0.054 -3.304 C S6K 28 S6K C3 C22 C 0 1 N N N N N N -20.208 4.277 28.904 0.868 -0.009 -0.058 C3 S6K 29 S6K O O3 O 0 1 N N N N N N -19.293 4.303 29.701 0.231 0.469 0.857 O S6K 30 S6K N N4 N 0 1 N N N N N N -20.081 4.301 27.546 2.145 0.297 -0.352 N S6K 31 S6K C2 C23 C 0 1 N N N N N N -21.368 4.142 26.860 2.623 -0.469 -1.510 C2 S6K 32 S6K C18 C24 C 0 1 Y N N N N N -18.846 4.431 26.824 2.915 1.224 0.353 C18 S6K 33 S6K C25 C25 C 0 1 Y N N N N N -19.003 6.938 26.622 2.185 3.069 -1.106 C25 S6K 34 S6K C23 C26 C 0 1 Y N N N N N -17.192 8.144 25.622 3.028 5.274 -0.680 C23 S6K 35 S6K C19 C27 C 0 1 Y N N N N N -18.063 3.308 26.565 3.679 0.832 1.432 C19 S6K 36 S6K H1 H1 H 0 1 N N N N N N -21.876 6.285 28.515 -1.281 -1.203 -2.433 H1 S6K 37 S6K H2 H2 H 0 1 N N N N N N -23.258 5.744 29.526 -1.063 0.428 -1.744 H2 S6K 38 S6K H3 H3 H 0 1 N N N N N N -21.330 5.973 32.674 -2.699 -2.439 0.848 H3 S6K 39 S6K H4 H4 H 0 1 N N N N N N -23.012 5.991 32.044 -2.738 -2.886 -0.874 H4 S6K 40 S6K H5 H5 H 0 1 N N N N N N -22.111 3.909 33.890 -1.652 -4.750 0.964 H5 S6K 41 S6K H6 H6 H 0 1 N N N N N N -18.885 6.910 29.384 -4.887 -0.745 -0.646 H6 S6K 42 S6K H7 H7 H 0 1 N N N N N N -18.765 6.577 31.146 -4.300 0.614 -1.635 H7 S6K 43 S6K H8 H8 H 0 1 N N N N N N -17.078 8.221 28.449 -7.303 2.346 -0.434 H8 S6K 44 S6K H9 H9 H 0 1 N N N N N N -15.982 9.050 29.606 -7.060 0.802 -1.413 H9 S6K 45 S6K H10 H10 H 0 1 N N N N N N -15.416 4.518 25.104 5.091 3.638 2.399 H10 S6K 46 S6K H11 H11 H 0 1 N N N N N N -15.533 7.021 24.929 4.372 5.533 0.941 H11 S6K 47 S6K H12 H12 H 0 1 N N N N N N -18.977 9.046 26.387 1.665 4.767 -2.254 H12 S6K 48 S6K H13 H13 H 0 1 N N N N N N -17.872 10.695 30.218 -6.997 1.031 1.714 H13 S6K 49 S6K H14 H14 H 0 1 N N N N N N -18.968 9.866 29.061 -6.754 -0.513 0.734 H14 S6K 50 S6K H15 H15 H 0 1 N N N N N N -21.911 1.538 29.571 2.466 -2.576 -0.604 H15 S6K 51 S6K H16 H16 H 0 1 N N N N N N -22.088 1.447 33.835 0.508 -5.894 1.220 H16 S6K 52 S6K H17 H17 H 0 1 N N N N N N -22.029 2.470 28.028 1.516 -2.008 -2.601 H17 S6K 53 S6K H18 H18 H 0 1 N N N N N N -24.316 3.267 28.508 0.788 0.953 -2.897 H18 S6K 54 S6K H19 H19 H 0 1 N N N N N N -23.980 4.787 27.612 1.607 -0.051 -4.117 H19 S6K 55 S6K H20 H20 H 0 1 N N N N N N -24.001 3.217 26.740 -0.087 -0.384 -3.682 H20 S6K 56 S6K H21 H21 H 0 1 N N N N N N -21.759 5.111 26.518 3.251 -1.296 -1.181 H21 S6K 57 S6K H22 H22 H 0 1 N N N N N N -21.281 3.458 26.003 3.177 0.180 -2.188 H22 S6K 58 S6K H23 H23 H 0 1 N N N N N N -19.972 6.942 27.099 1.570 2.397 -1.686 H23 S6K 59 S6K H24 H24 H 0 1 N N N N N N -16.760 9.088 25.324 3.053 6.320 -0.951 H24 S6K 60 S6K H25 H25 H 0 1 N N N N N N -18.455 2.349 26.871 3.677 -0.206 1.730 H25 S6K 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S6K C22 C23 DOUB Y N 1 S6K C22 C21 SING Y N 2 S6K C20 C21 DOUB Y N 3 S6K C20 N3 SING Y N 4 S6K C23 C24 SING Y N 5 S6K C21 C26 SING Y N 6 S6K N3 C19 DOUB Y N 7 S6K C24 C25 DOUB Y N 8 S6K C26 C25 SING Y N 9 S6K C26 C18 DOUB Y N 10 S6K C19 C18 SING Y N 11 S6K C18 N SING N N 12 S6K C2 N SING N N 13 S6K C2 C1 SING N N 14 S6K N C3 SING N N 15 S6K C C1 SING N N 16 S6K C1 C4 SING N N 17 S6K C3 C4 SING N N 18 S6K C3 O DOUB N N 19 S6K C4 C5 SING N N 20 S6K C4 C12 SING N N 21 S6K C15 C16 SING N N 22 S6K C15 C14 SING N N 23 S6K C5 N1 SING N N 24 S6K O1 S DOUB N N 25 S6K C16 C14 SING N N 26 S6K C13 C14 SING N N 27 S6K C13 S SING N N 28 S6K C11 C12 DOUB Y N 29 S6K C11 C10 SING Y N 30 S6K C14 C17 SING N N 31 S6K C12 C7 SING Y N 32 S6K S N1 SING N N 33 S6K S O2 DOUB N N 34 S6K N1 C6 SING N N 35 S6K CL C10 SING N N 36 S6K C10 C9 DOUB Y N 37 S6K C7 C6 SING N N 38 S6K C7 C8 DOUB Y N 39 S6K C17 N2 TRIP N N 40 S6K C9 C8 SING Y N 41 S6K C5 H1 SING N N 42 S6K C5 H2 SING N N 43 S6K C6 H3 SING N N 44 S6K C6 H4 SING N N 45 S6K C8 H5 SING N N 46 S6K C13 H6 SING N N 47 S6K C13 H7 SING N N 48 S6K C15 H8 SING N N 49 S6K C15 H9 SING N N 50 S6K C20 H10 SING N N 51 S6K C22 H11 SING N N 52 S6K C24 H12 SING N N 53 S6K C16 H13 SING N N 54 S6K C16 H14 SING N N 55 S6K C11 H15 SING N N 56 S6K C9 H16 SING N N 57 S6K C1 H17 SING N N 58 S6K C H18 SING N N 59 S6K C H19 SING N N 60 S6K C H20 SING N N 61 S6K C2 H21 SING N N 62 S6K C2 H22 SING N N 63 S6K C25 H23 SING N N 64 S6K C23 H24 SING N N 65 S6K C19 H25 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S6K SMILES ACDLabs 12.01 "N#CC1(CC1)CS(=O)(=O)N1Cc2ccc(Cl)cc2C2(C1)C(=O)N(CC2C)c1cncc2ccccc21" S6K InChI InChI 1.06 "InChI=1S/C27H25ClN4O3S/c1-18-13-32(24-12-30-11-19-4-2-3-5-22(19)24)25(33)27(18)16-31(14-20-6-7-21(28)10-23(20)27)36(34,35)17-26(15-29)8-9-26/h2-7,10-12,18H,8-9,13-14,16-17H2,1H3/t18-,27-/m0/s1" S6K InChIKey InChI 1.06 WAAAIQKYRCBKNL-MYUZEXMDSA-N S6K SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CN(C(=O)[C@@]12CN(Cc3ccc(Cl)cc23)[S](=O)(=O)CC4(CC4)C#N)c5cncc6ccccc56" S6K SMILES CACTVS 3.385 "C[CH]1CN(C(=O)[C]12CN(Cc3ccc(Cl)cc23)[S](=O)(=O)CC4(CC4)C#N)c5cncc6ccccc56" S6K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1CN(C(=O)[C@@]12CN(Cc3c2cc(cc3)Cl)S(=O)(=O)CC4(CC4)C#N)c5cncc6c5cccc6" S6K SMILES "OpenEye OEToolkits" 2.0.7 "CC1CN(C(=O)C12CN(Cc3c2cc(cc3)Cl)S(=O)(=O)CC4(CC4)C#N)c5cncc6c5cccc6" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier S6K "SYSTEMATIC NAME" ACDLabs 12.01 "1-{[(3'S,4'R)-6-chloro-1'-(isoquinolin-4-yl)-4'-methyl-2'-oxo-1H-spiro[isoquinoline-4,3'-pyrrolidine]-2(3H)-sulfonyl]methyl}cyclopropane-1-carbonitrile" S6K "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[[(4~{S},4'~{R})-6-chloranyl-1'-isoquinolin-4-yl-4'-methyl-2'-oxidanylidene-spiro[1,3-dihydroisoquinoline-4,3'-pyrrolidine]-2-yl]sulfonylmethyl]cyclopropane-1-carbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S6K "Create component" 2023-08-22 RCSB S6K "Initial release" 2023-11-08 RCSB #