data_S6O # _chem_comp.id S6O _chem_comp.name "~{N}-[2-[(2-carbamimidoyl-1-benzothiophen-4-yl)-methyl-amino]ethyl]-2-(4-chloranylphenoxy)-~{N},2-dimethyl-propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H27 Cl N4 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-14 _chem_comp.pdbx_modified_date 2023-08-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 459.004 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S6O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BYG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S6O C2 C1 C 0 1 Y N N 19.295 17.956 -5.700 3.467 -0.066 -0.894 C2 S6O 1 S6O C7 C2 C 0 1 N N N 14.780 19.763 -0.980 -2.648 1.597 -0.716 C7 S6O 2 S6O C6 C3 C 0 1 N N N 15.692 21.062 -2.889 -0.518 2.738 -1.024 C6 S6O 3 S6O C4 C4 C 0 1 Y N N 18.299 20.286 -5.012 2.614 1.761 0.664 C4 S6O 4 S6O C10 C5 C 0 1 N N N 12.814 21.163 -0.325 -4.234 1.664 1.189 C10 S6O 5 S6O C9 C6 C 0 1 N N N 13.834 19.533 1.289 -4.794 2.816 -0.956 C9 S6O 6 S6O C15 C7 C 0 1 Y N N 18.210 20.032 1.656 -2.623 -1.991 0.940 C15 S6O 7 S6O C13 C8 C 0 1 Y N N 17.883 22.119 2.805 -4.405 -3.160 -0.158 C13 S6O 8 S6O O O1 O 0 1 N N N 14.979 21.567 0.658 -4.726 0.405 -0.814 O S6O 9 S6O C C9 C 0 1 N N N 20.513 16.096 -6.836 4.514 -1.981 -2.088 C S6O 10 S6O N N1 N 0 1 N N N 21.138 15.640 -7.851 5.385 -3.048 -2.002 N S6O 11 S6O C3 C10 C 0 1 Y N N 19.142 19.384 -5.717 3.391 0.620 0.329 C3 S6O 12 S6O C1 C11 C 0 1 Y N N 20.247 17.495 -6.527 4.287 -1.119 -0.915 C1 S6O 13 S6O C5 C12 C 0 1 N N N 17.078 20.447 -2.815 0.384 2.326 0.141 C5 S6O 14 S6O C11 C13 C 0 1 Y N N 16.190 21.274 1.346 -4.249 -0.774 -0.333 C11 S6O 15 S6O C8 C14 C 0 1 N N N 14.104 20.519 0.166 -4.106 1.599 -0.334 C8 S6O 16 S6O C12 C15 C 0 1 Y N N 16.635 22.241 2.233 -4.891 -1.963 -0.647 C12 S6O 17 S6O C14 C16 C 0 1 Y N N 18.672 21.027 2.489 -3.271 -3.174 0.635 C14 S6O 18 S6O S S1 S 0 1 Y N N 21.072 18.792 -7.374 5.058 -1.335 0.646 S S6O 19 S6O C16 C17 C 0 1 Y N N 16.964 20.157 1.082 -3.110 -0.791 0.457 C16 S6O 20 S6O C17 C18 C 0 1 N N N 13.549 19.844 -3.085 -2.520 3.928 -0.017 C17 S6O 21 S6O C18 C19 C 0 1 N N N 16.563 18.680 -4.495 2.224 3.709 -0.609 C18 S6O 22 S6O C19 C20 C 0 1 Y N N 18.340 21.659 -5.212 2.676 2.295 1.932 C19 S6O 23 S6O C20 C21 C 0 1 Y N N 19.239 22.184 -6.120 3.497 1.725 2.895 C20 S6O 24 S6O C21 C22 C 0 1 Y N N 20.093 21.356 -6.829 4.259 0.622 2.591 C21 S6O 25 S6O C22 C23 C 0 1 Y N N 20.046 19.987 -6.614 4.213 0.058 1.312 C22 S6O 26 S6O N1 N2 N 0 1 N N N 20.002 15.234 -5.950 3.890 -1.736 -3.208 N1 S6O 27 S6O N2 N3 N 0 1 N N N 17.447 19.714 -4.037 1.786 2.343 -0.295 N2 S6O 28 S6O N3 N4 N 0 1 N N N 14.683 20.214 -2.252 -1.917 2.721 -0.590 N3 S6O 29 S6O O1 O2 O 0 1 N N N 15.394 18.735 -0.749 -2.134 0.583 -1.138 O1 S6O 30 S6O CL CL1 CL 0 0 N N N 20.305 20.947 3.079 -2.661 -4.680 1.247 CL S6O 31 S6O H3 H1 H 0 1 N N N 18.696 17.309 -5.076 2.896 0.236 -1.760 H3 S6O 32 S6O H6 H2 H 0 1 N N N 15.708 22.038 -2.381 -0.251 3.743 -1.352 H6 S6O 33 S6O H7 H3 H 0 1 N N N 15.422 21.203 -3.946 -0.386 2.039 -1.850 H7 S6O 34 S6O H12 H4 H 0 1 N N N 12.335 21.704 0.504 -3.838 2.615 1.547 H12 S6O 35 S6O H13 H5 H 0 1 N N N 13.042 21.867 -1.139 -5.284 1.579 1.470 H13 S6O 36 S6O H11 H6 H 0 1 N N N 12.133 20.383 -0.696 -3.671 0.845 1.636 H11 S6O 37 S6O H9 H7 H 0 1 N N N 13.347 20.054 2.126 -4.524 2.888 -2.009 H9 S6O 38 S6O H10 H8 H 0 1 N N N 13.175 18.732 0.923 -5.875 2.708 -0.865 H10 S6O 39 S6O H8 H9 H 0 1 N N N 14.785 19.098 1.631 -4.474 3.719 -0.436 H8 S6O 40 S6O H16 H10 H 0 1 N N N 18.818 19.163 1.455 -1.738 -2.004 1.559 H16 S6O 41 S6O H15 H11 H 0 1 N N N 18.242 22.869 3.494 -4.910 -4.085 -0.395 H15 S6O 42 S6O H H12 H 0 1 N N N 21.239 14.653 -7.974 5.849 -3.230 -1.170 H S6O 43 S6O H27 H13 H 0 1 N N N 21.527 16.270 -8.523 5.535 -3.615 -2.774 H27 S6O 44 S6O H5 H14 H 0 1 N N N 17.107 19.749 -1.965 0.252 3.025 0.967 H5 S6O 45 S6O H4 H15 H 0 1 N N N 17.811 21.252 -2.654 0.117 1.321 0.469 H4 S6O 46 S6O H14 H16 H 0 1 N N N 16.007 23.086 2.475 -5.771 -1.953 -1.274 H14 S6O 47 S6O H17 H17 H 0 1 N N N 16.591 19.384 0.426 -2.603 0.132 0.696 H17 S6O 48 S6O H19 H18 H 0 1 N N N 12.860 19.211 -2.507 -2.998 4.505 -0.808 H19 S6O 49 S6O H18 H19 H 0 1 N N N 13.024 20.753 -3.414 -3.265 3.643 0.726 H18 S6O 50 S6O H20 H20 H 0 1 N N N 13.906 19.289 -3.965 -1.746 4.531 0.457 H20 S6O 51 S6O H22 H21 H 0 1 N N N 15.956 18.316 -3.653 3.243 3.685 -0.995 H22 S6O 52 S6O H21 H22 H 0 1 N N N 15.902 19.083 -5.277 1.561 4.140 -1.359 H21 S6O 53 S6O H23 H23 H 0 1 N N N 17.154 17.848 -4.907 2.193 4.317 0.296 H23 S6O 54 S6O H24 H24 H 0 1 N N N 17.676 22.310 -4.663 2.082 3.162 2.179 H24 S6O 55 S6O H25 H25 H 0 1 N N N 19.276 23.252 -6.279 3.538 2.151 3.887 H25 S6O 56 S6O H26 H26 H 0 1 N N N 20.789 21.772 -7.542 4.896 0.185 3.347 H26 S6O 57 S6O H1 H27 H 0 1 N N N 19.515 15.700 -5.212 3.277 -0.987 -3.269 H1 S6O 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S6O N C SING N N 1 S6O S C22 SING Y N 2 S6O S C1 SING Y N 3 S6O C C1 SING N N 4 S6O C N1 DOUB N N 5 S6O C21 C22 DOUB Y N 6 S6O C21 C20 SING Y N 7 S6O C22 C3 SING Y N 8 S6O C1 C2 DOUB Y N 9 S6O C20 C19 DOUB Y N 10 S6O C3 C2 SING Y N 11 S6O C3 C4 DOUB Y N 12 S6O C19 C4 SING Y N 13 S6O C4 N2 SING N N 14 S6O C18 N2 SING N N 15 S6O N2 C5 SING N N 16 S6O C17 N3 SING N N 17 S6O C6 C5 SING N N 18 S6O C6 N3 SING N N 19 S6O N3 C7 SING N N 20 S6O C7 O1 DOUB N N 21 S6O C7 C8 SING N N 22 S6O C10 C8 SING N N 23 S6O C8 O SING N N 24 S6O C8 C9 SING N N 25 S6O O C11 SING N N 26 S6O C16 C11 DOUB Y N 27 S6O C16 C15 SING Y N 28 S6O C11 C12 SING Y N 29 S6O C15 C14 DOUB Y N 30 S6O C12 C13 DOUB Y N 31 S6O C14 C13 SING Y N 32 S6O C14 CL SING N N 33 S6O C2 H3 SING N N 34 S6O C6 H6 SING N N 35 S6O C6 H7 SING N N 36 S6O C10 H12 SING N N 37 S6O C10 H13 SING N N 38 S6O C10 H11 SING N N 39 S6O C9 H9 SING N N 40 S6O C9 H10 SING N N 41 S6O C9 H8 SING N N 42 S6O C15 H16 SING N N 43 S6O C13 H15 SING N N 44 S6O N H SING N N 45 S6O N H27 SING N N 46 S6O C5 H5 SING N N 47 S6O C5 H4 SING N N 48 S6O C12 H14 SING N N 49 S6O C16 H17 SING N N 50 S6O C17 H19 SING N N 51 S6O C17 H18 SING N N 52 S6O C17 H20 SING N N 53 S6O C18 H22 SING N N 54 S6O C18 H21 SING N N 55 S6O C18 H23 SING N N 56 S6O C19 H24 SING N N 57 S6O C20 H25 SING N N 58 S6O C21 H26 SING N N 59 S6O N1 H1 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S6O InChI InChI 1.06 "InChI=1S/C23H27ClN4O2S/c1-23(2,30-16-10-8-15(24)9-11-16)22(29)28(4)13-12-27(3)18-6-5-7-19-17(18)14-20(31-19)21(25)26/h5-11,14H,12-13H2,1-4H3,(H3,25,26)" S6O InChIKey InChI 1.06 WWBHPHFJJFVXBN-UHFFFAOYSA-N S6O SMILES_CANONICAL CACTVS 3.385 "CN(CCN(C)c1cccc2sc(cc12)C(N)=N)C(=O)C(C)(C)Oc3ccc(Cl)cc3" S6O SMILES CACTVS 3.385 "CN(CCN(C)c1cccc2sc(cc12)C(N)=N)C(=O)C(C)(C)Oc3ccc(Cl)cc3" S6O SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[H]/N=C(/c1cc2c(cccc2s1)N(C)CCN(C)C(=O)C(C)(C)Oc3ccc(cc3)Cl)\N" S6O SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)(C(=O)N(C)CCN(C)c1cccc2c1cc(s2)C(=N)N)Oc3ccc(cc3)Cl" # _pdbx_chem_comp_identifier.comp_id S6O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "~{N}-[2-[(2-carbamimidoyl-1-benzothiophen-4-yl)-methyl-amino]ethyl]-2-(4-chloranylphenoxy)-~{N},2-dimethyl-propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S6O "Create component" 2022-12-14 PDBE S6O "Initial release" 2023-08-30 RCSB #