data_S6P # _chem_comp.id S6P _chem_comp.name D-SORBITOL-6-PHOSPHATE _chem_comp.type D-SACCHARIDE _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H15 O9 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1-O-PHOSPHONO-D-GLUCITOL; D-GLUCITOL-6-PHOSPHATE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-10-28 _chem_comp.pdbx_modified_date 2020-05-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 262.152 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S6P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1XTB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S6P C1 C1 C 0 1 N N N 15.415 8.631 28.332 4.932 0.460 -0.029 C1 S6P 1 S6P C2 C2 C 0 1 N N S 15.446 9.321 29.703 3.638 -0.185 0.472 C2 S6P 2 S6P C3 C3 C 0 1 N N R 16.047 8.461 30.843 2.441 0.647 0.008 C3 S6P 3 S6P C4 C4 C 0 1 N N R 17.598 8.481 30.850 1.144 -0.063 0.401 C4 S6P 4 S6P C5 C5 C 0 1 N N R 18.214 7.930 32.149 -0.050 0.704 -0.171 C5 S6P 5 S6P C6 C6 C 0 1 N N N 19.781 8.082 32.136 -1.347 -0.006 0.222 C6 S6P 6 S6P O1 O1 O 0 1 N N N 14.881 9.479 27.464 6.054 -0.249 0.501 O1 S6P 7 S6P O2 O2 O 0 1 N N N 16.238 10.523 29.559 3.531 -1.509 -0.054 O2 S6P 8 S6P O3 O3 O 0 1 N N N 15.616 7.092 30.754 2.489 0.800 -1.412 O3 S6P 9 S6P O4 O4 O 0 1 N N N 18.068 7.680 29.740 1.151 -1.393 -0.122 O4 S6P 10 S6P O5 O5 O 0 1 N N N 17.885 8.715 33.269 -0.058 2.034 0.352 O5 S6P 11 S6P O6 O6 O 0 1 N N N 20.226 7.522 30.909 -2.455 0.642 -0.408 O6 S6P 12 S6P P P P 0 1 N N N 21.874 7.629 30.719 -3.779 -0.153 0.047 P S6P 13 S6P O1P O1P O 0 1 N N N 22.326 9.102 30.774 -5.081 0.604 -0.521 O1P S6P 14 S6P O2P O2P O 0 1 N N N 22.581 6.931 31.863 -3.732 -1.652 -0.536 O2P S6P 15 S6P O3P O3P O 0 1 N N N 22.185 6.974 29.374 -3.842 -0.200 1.525 O3P S6P 16 S6P H11 1H1 H 0 1 N N N 14.891 7.647 28.354 4.971 1.499 0.299 H11 S6P 17 S6P H12 2H1 H 0 1 N N N 16.416 8.258 28.013 4.959 0.422 -1.118 H12 S6P 18 S6P H2 H2 H 0 1 N N N 14.390 9.521 29.999 3.651 -0.227 1.561 H2 S6P 19 S6P H3 H3 H 0 1 N N N 15.675 8.919 31.789 2.476 1.629 0.480 H3 S6P 20 S6P H4 H4 H 0 1 N N N 17.915 9.547 30.767 1.065 -0.100 1.487 H4 S6P 21 S6P H5 H5 H 0 1 N N N 17.840 6.881 32.207 0.028 0.741 -1.258 H5 S6P 22 S6P H61 1H6 H 0 1 N N N 20.276 7.638 33.031 -1.304 -1.047 -0.100 H61 S6P 23 S6P H62 2H6 H 0 1 N N N 20.125 9.131 32.295 -1.470 0.034 1.304 H62 S6P 24 S6P HO1 HO1 H 0 1 N N N 14.862 9.052 26.616 6.847 0.189 0.162 HO1 S6P 25 S6P HO2 HO2 H 0 1 N N N 16.257 10.950 30.407 3.523 -1.427 -1.018 HO2 S6P 26 S6P HO3 HO3 H 0 1 N N N 15.985 6.565 31.453 2.456 -0.090 -1.790 HO3 S6P 27 S6P HO4 HO4 H 0 1 N N N 19.018 7.692 29.744 1.222 -1.314 -1.084 HO4 S6P 28 S6P HO5 HO5 H 0 1 N N N 18.265 8.375 34.071 -0.128 1.955 1.313 HO5 S6P 29 S6P H1P H1P H 0 1 N N N 23.268 9.163 30.665 -5.850 0.097 -0.227 H1P S6P 30 S6P H2P H2P H 0 1 N N N 23.523 6.992 31.754 -3.692 -1.576 -1.499 H2P S6P 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S6P C1 C2 SING N N 1 S6P C1 O1 SING N N 2 S6P C1 H11 SING N N 3 S6P C1 H12 SING N N 4 S6P C2 C3 SING N N 5 S6P C2 O2 SING N N 6 S6P C2 H2 SING N N 7 S6P C3 C4 SING N N 8 S6P C3 O3 SING N N 9 S6P C3 H3 SING N N 10 S6P C4 C5 SING N N 11 S6P C4 O4 SING N N 12 S6P C4 H4 SING N N 13 S6P C5 C6 SING N N 14 S6P C5 O5 SING N N 15 S6P C5 H5 SING N N 16 S6P C6 O6 SING N N 17 S6P C6 H61 SING N N 18 S6P C6 H62 SING N N 19 S6P O1 HO1 SING N N 20 S6P O2 HO2 SING N N 21 S6P O3 HO3 SING N N 22 S6P O4 HO4 SING N N 23 S6P O5 HO5 SING N N 24 S6P O6 P SING N N 25 S6P P O1P SING N N 26 S6P P O2P SING N N 27 S6P P O3P DOUB N N 28 S6P O1P H1P SING N N 29 S6P O2P H2P SING N N 30 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S6P SMILES ACDLabs 10.04 "O=P(O)(O)OCC(O)C(O)C(O)C(O)CO" S6P SMILES_CANONICAL CACTVS 3.341 "OC[C@H](O)[C@@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O" S6P SMILES CACTVS 3.341 "OC[CH](O)[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O" S6P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C([C@@H]([C@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O)O)O" S6P SMILES "OpenEye OEToolkits" 1.5.0 "C(C(C(C(C(COP(=O)(O)O)O)O)O)O)O" S6P InChI InChI 1.03 "InChI=1S/C6H15O9P/c7-1-3(8)5(10)6(11)4(9)2-15-16(12,13)14/h3-11H,1-2H2,(H2,12,13,14)/t3-,4+,5+,6+/m0/s1" S6P InChIKey InChI 1.03 GACTWZZMVMUKNG-SLPGGIOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier S6P "SYSTEMATIC NAME" ACDLabs 10.04 6-O-phosphono-D-glucitol S6P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3R,4R,5S)-2,3,4,5,6-pentahydroxyhexyl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S6P "Create component" 2004-10-28 RCSB S6P "Modify descriptor" 2011-06-04 RCSB S6P "Modify synonyms" 2020-05-27 PDBE # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 S6P 1-O-PHOSPHONO-D-GLUCITOL ? ? 2 S6P D-GLUCITOL-6-PHOSPHATE ? ? #