data_S87 # _chem_comp.id S87 _chem_comp.name ondansetron _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "9-methyl-3-[(2-methylimidazol-1-yl)methyl]-2,3-dihydro-1~{H}-carbazol-4-one" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-03-05 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 293.363 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S87 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6W1M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S87 C10 C1 C 0 1 N N N 124.999 96.225 94.343 3.863 2.422 0.370 C10 S87 1 S87 C11 C2 C 0 1 Y N N 123.241 100.735 94.474 2.200 -2.192 -0.074 C11 S87 2 S87 C12 C3 C 0 1 Y N N 122.557 98.062 94.789 4.558 -0.631 0.289 C12 S87 3 S87 C13 C4 C 0 1 Y N N 131.009 101.094 93.930 -4.190 0.001 0.555 C13 S87 4 S87 C14 C5 C 0 1 Y N N 130.742 101.073 91.823 -3.231 -1.488 -0.732 C14 S87 5 S87 C15 C6 C 0 1 Y N N 121.941 100.383 94.790 3.452 -2.772 0.036 C15 S87 6 S87 C16 C7 C 0 1 Y N N 121.601 99.046 94.946 4.595 -2.013 0.212 C16 S87 7 S87 C17 C8 C 0 1 Y N N 132.049 100.733 92.115 -4.112 -2.103 0.081 C17 S87 8 S87 C18 C9 C 0 1 N N N 130.696 101.231 95.402 -4.571 1.307 1.202 C18 S87 9 S87 C01 C10 C 0 1 N N R 127.842 100.488 93.441 -1.239 1.179 -0.220 C01 S87 10 S87 C02 C11 C 0 1 N N N 128.272 99.167 93.422 -0.491 2.379 -0.802 C02 S87 11 S87 C03 C12 C 0 1 N N N 127.376 98.145 93.687 0.772 2.671 0.016 C03 S87 12 S87 C04 C13 C 0 1 Y N N 126.031 98.449 93.975 1.609 1.414 0.052 C04 S87 13 S87 C05 C14 C 0 1 Y N N 125.619 99.744 93.991 1.044 0.150 -0.077 C05 S87 14 S87 C06 C15 C 0 1 N N N 126.527 100.773 93.723 -0.350 -0.045 -0.237 C06 S87 15 S87 C07 C16 C 0 1 N N N 128.767 101.663 93.158 -2.490 0.909 -1.059 C07 S87 16 S87 C08 C17 C 0 1 Y N N 124.211 99.735 94.314 2.141 -0.801 -0.005 C08 S87 17 S87 C09 C18 C 0 1 Y N N 123.880 98.424 94.467 3.312 -0.021 0.170 C09 S87 18 S87 N01 N1 N 0 1 Y N N 124.972 97.665 94.264 2.939 1.298 0.200 N01 S87 19 S87 N02 N2 N 0 1 Y N N 130.142 101.274 92.973 -3.279 -0.153 -0.430 N02 S87 20 S87 N03 N3 N 0 1 Y N N 132.169 100.758 93.425 -4.682 -1.170 0.857 N03 S87 21 S87 O01 O1 O 0 1 N N N 126.105 102.097 93.739 -0.815 -1.156 -0.382 O01 S87 22 S87 H1 H1 H 0 1 N N N 123.995 95.852 94.595 3.973 2.645 1.431 H1 S87 23 S87 H2 H2 H 0 1 N N N 125.311 95.810 93.373 4.834 2.161 -0.050 H2 S87 24 S87 H3 H3 H 0 1 N N N 125.712 95.914 95.121 3.468 3.297 -0.146 H3 S87 25 S87 H4 H4 H 0 1 N N N 123.507 101.774 94.351 1.310 -2.789 -0.212 H4 S87 26 S87 H5 H5 H 0 1 N N N 122.292 97.022 94.912 5.458 -0.050 0.427 H5 S87 27 S87 H6 H6 H 0 1 N N N 130.301 101.157 90.841 -2.607 -1.957 -1.477 H6 S87 28 S87 H7 H7 H 0 1 N N N 121.190 101.149 94.915 3.538 -3.847 -0.017 H7 S87 29 S87 H8 H8 H 0 1 N N N 120.585 98.774 95.191 5.548 -2.515 0.292 H8 S87 30 S87 H9 H9 H 0 1 N N N 132.825 100.492 91.403 -4.322 -3.162 0.103 H9 S87 31 S87 H10 H10 H 0 1 N N N 131.597 101.004 95.992 -5.401 1.755 0.655 H10 S87 32 S87 H11 H11 H 0 1 N N N 130.369 102.260 95.613 -4.872 1.128 2.234 H11 S87 33 S87 H12 H12 H 0 1 N N N 129.894 100.529 95.673 -3.717 1.984 1.185 H12 S87 34 S87 H13 H13 H 0 1 N N N 128.680 98.980 92.418 -0.211 2.163 -1.833 H13 S87 35 S87 H14 H14 H 0 1 N N N 127.372 97.488 92.804 1.337 3.477 -0.453 H14 S87 36 S87 H15 H15 H 0 1 N N N 128.713 102.362 94.006 -3.089 1.818 -1.121 H15 S87 37 S87 H16 H16 H 0 1 N N N 128.421 102.168 92.244 -2.196 0.598 -2.061 H16 S87 38 S87 H18 H18 H 0 1 N N N 128.086 100.553 94.512 -1.533 1.399 0.806 H18 S87 39 S87 H19 H19 H 0 1 N N N 129.078 99.084 94.166 -1.142 3.253 -0.785 H19 S87 40 S87 H20 H20 H 0 1 N N N 127.770 97.593 94.553 0.495 2.957 1.031 H20 S87 41 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S87 C14 C17 DOUB Y N 1 S87 C14 N02 SING Y N 2 S87 C17 N03 SING Y N 3 S87 N02 C07 SING N N 4 S87 N02 C13 SING Y N 5 S87 C07 C01 SING N N 6 S87 C02 C01 SING N N 7 S87 C02 C03 SING N N 8 S87 N03 C13 DOUB Y N 9 S87 C01 C06 SING N N 10 S87 C03 C04 SING N N 11 S87 C06 O01 DOUB N N 12 S87 C06 C05 SING N N 13 S87 C13 C18 SING N N 14 S87 C04 C05 DOUB Y N 15 S87 C04 N01 SING Y N 16 S87 C05 C08 SING Y N 17 S87 N01 C10 SING N N 18 S87 N01 C09 SING Y N 19 S87 C08 C09 DOUB Y N 20 S87 C08 C11 SING Y N 21 S87 C09 C12 SING Y N 22 S87 C11 C15 DOUB Y N 23 S87 C12 C16 DOUB Y N 24 S87 C15 C16 SING Y N 25 S87 C10 H1 SING N N 26 S87 C10 H2 SING N N 27 S87 C10 H3 SING N N 28 S87 C11 H4 SING N N 29 S87 C12 H5 SING N N 30 S87 C14 H6 SING N N 31 S87 C15 H7 SING N N 32 S87 C16 H8 SING N N 33 S87 C17 H9 SING N N 34 S87 C18 H10 SING N N 35 S87 C18 H11 SING N N 36 S87 C18 H12 SING N N 37 S87 C02 H13 SING N N 38 S87 C03 H14 SING N N 39 S87 C07 H15 SING N N 40 S87 C07 H16 SING N N 41 S87 C01 H18 SING N N 42 S87 C02 H19 SING N N 43 S87 C03 H20 SING N N 44 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S87 InChI InChI 1.03 "InChI=1S/C18H19N3O/c1-12-19-9-10-21(12)11-13-7-8-16-17(18(13)22)14-5-3-4-6-15(14)20(16)2/h3-6,9-10,13H,7-8,11H2,1-2H3" S87 InChIKey InChI 1.03 FELGMEQIXOGIFQ-UHFFFAOYSA-N S87 SMILES_CANONICAL CACTVS 3.385 "Cn1c2CC[C@H](Cn3ccnc3C)C(=O)c2c4ccccc14" S87 SMILES CACTVS 3.385 "Cn1c2CC[CH](Cn3ccnc3C)C(=O)c2c4ccccc14" S87 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1nccn1CC2CCc3c(c4ccccc4n3C)C2=O" S87 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1nccn1CC2CCc3c(c4ccccc4n3C)C2=O" # _pdbx_chem_comp_identifier.comp_id S87 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "9-methyl-3-[(2-methylimidazol-1-yl)methyl]-2,3-dihydro-1~{H}-carbazol-4-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S87 "Create component" 2020-03-05 RCSB S87 "Initial release" 2021-01-13 RCSB S87 "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id S87 _pdbx_chem_comp_synonyms.name "9-methyl-3-[(2-methylimidazol-1-yl)methyl]-2,3-dihydro-1~{H}-carbazol-4-one" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##