data_S9K # _chem_comp.id S9K _chem_comp.name "7-(2-phenylazanylpyrimidin-4-yl)-1,3,4,5-tetrahydro-1-benzazepin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H18 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-12 _chem_comp.pdbx_modified_date 2021-01-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 330.383 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S9K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AYI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S9K C7 C1 C 0 1 Y N N -6.204 -29.691 5.232 -1.659 0.364 0.072 C7 S9K 1 S9K C9 C2 C 0 1 N N N -7.181 -29.092 2.993 -3.505 1.947 0.272 C9 S9K 2 S9K N1 N1 N 0 1 Y N N -3.837 -32.411 8.777 3.066 -1.310 -0.222 N1 S9K 3 S9K C2 C3 C 0 1 N N N -9.746 -27.440 3.700 -6.178 0.326 0.136 C2 S9K 4 S9K N2 N2 N 0 1 N N N -3.185 -33.330 6.814 3.294 1.007 -0.010 N2 S9K 5 S9K C10 C4 C 0 1 Y N N -5.243 -30.486 7.408 0.383 -1.050 -0.121 C10 S9K 6 S9K C4 C5 C 0 1 Y N N -7.701 -27.747 6.522 -3.280 -1.845 -0.088 C4 S9K 7 S9K N3 N3 N 0 1 Y N N -4.574 -31.429 6.711 1.179 0.015 -0.043 N3 S9K 8 S9K C6 C6 C 0 1 Y N N -6.096 -29.556 6.619 -1.089 -0.894 -0.064 C6 S9K 9 S9K O O1 O 0 1 N N N -10.894 -27.270 4.102 -7.315 -0.082 0.022 O S9K 10 S9K C1 C7 C 0 1 N N N -9.461 -28.121 2.387 -6.015 1.798 0.261 C1 S9K 11 S9K N N4 N 0 1 N N N -8.684 -27.047 4.434 -5.235 -0.571 0.115 N S9K 12 S9K C3 C8 C 0 1 Y N N -7.803 -27.895 5.141 -3.862 -0.572 0.061 C3 S9K 13 S9K C8 C9 C 0 1 Y N N -7.054 -28.879 4.482 -3.040 0.534 0.132 C8 S9K 14 S9K C C10 C 0 1 N N N -8.610 -29.387 2.521 -4.773 2.289 -0.445 C S9K 15 S9K C5 C11 C 0 1 Y N N -6.856 -28.568 7.245 -1.921 -2.012 -0.146 C5 S9K 16 S9K C13 C12 C 0 1 Y N N -3.902 -32.348 7.439 2.494 -0.122 -0.093 C13 S9K 17 S9K C12 C13 C 0 1 Y N N -4.498 -31.447 9.426 2.338 -2.412 -0.306 C12 S9K 18 S9K C11 C14 C 0 1 Y N N -5.209 -30.452 8.796 0.959 -2.317 -0.257 C11 S9K 19 S9K C14 C15 C 0 1 Y N N -2.963 -33.647 5.454 4.684 0.875 0.055 C14 S9K 20 S9K C19 C16 C 0 1 Y N N -3.537 -32.913 4.421 5.502 1.832 -0.533 C19 S9K 21 S9K C18 C17 C 0 1 Y N N -3.299 -33.271 3.103 6.875 1.699 -0.467 C18 S9K 22 S9K C17 C18 C 0 1 Y N N -2.496 -34.355 2.807 7.436 0.615 0.183 C17 S9K 23 S9K C16 C19 C 0 1 Y N N -1.924 -35.084 3.828 6.625 -0.339 0.770 C16 S9K 24 S9K C15 C20 C 0 1 Y N N -2.149 -34.736 5.150 5.251 -0.209 0.712 C15 S9K 25 S9K H1 H1 H 0 1 N N N -5.614 -30.443 4.729 -1.017 1.230 0.136 H1 S9K 26 S9K H2 H2 H 0 1 N N N -6.542 -29.941 2.710 -3.646 2.156 1.332 H2 S9K 27 S9K H3 H3 H 0 1 N N N -6.830 -28.183 2.483 -2.718 2.603 -0.101 H3 S9K 28 S9K H4 H4 H 0 1 N N N -2.723 -33.951 7.448 2.889 1.888 0.004 H4 S9K 29 S9K H5 H5 H 0 1 N N N -8.282 -26.991 7.028 -3.920 -2.713 -0.149 H5 S9K 30 S9K H6 H6 H 0 1 N N N -8.928 -27.412 1.737 -6.886 2.290 -0.170 H6 S9K 31 S9K H7 H7 H 0 1 N N N -10.420 -28.395 1.923 -5.948 2.059 1.317 H7 S9K 32 S9K H8 H8 H 0 1 N N N -8.504 -26.064 4.482 -5.593 -1.471 0.163 H8 S9K 33 S9K H9 H9 H 0 1 N N N -9.090 -30.058 3.249 -4.836 3.372 -0.548 H9 S9K 34 S9K H10 H10 H 0 1 N N N -8.561 -29.884 1.541 -4.741 1.848 -1.441 H10 S9K 35 S9K H11 H11 H 0 1 N N N -6.783 -28.442 8.315 -1.498 -2.998 -0.263 H11 S9K 36 S9K H12 H12 H 0 1 N N N -4.472 -31.450 10.506 2.815 -3.375 -0.411 H12 S9K 37 S9K H13 H13 H 0 1 N N N -5.717 -29.680 9.355 0.341 -3.200 -0.323 H13 S9K 38 S9K H14 H14 H 0 1 N N N -4.167 -32.065 4.646 5.064 2.678 -1.042 H14 S9K 39 S9K H15 H15 H 0 1 N N N -3.744 -32.699 2.303 7.511 2.442 -0.924 H15 S9K 40 S9K H16 H16 H 0 1 N N N -2.317 -34.631 1.778 8.510 0.514 0.233 H16 S9K 41 S9K H17 H17 H 0 1 N N N -1.297 -35.932 3.596 7.066 -1.185 1.276 H17 S9K 42 S9K H18 H18 H 0 1 N N N -1.694 -35.309 5.944 4.618 -0.954 1.171 H18 S9K 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S9K C1 C SING N N 1 S9K C1 C2 SING N N 2 S9K C C9 SING N N 3 S9K C17 C18 DOUB Y N 4 S9K C17 C16 SING Y N 5 S9K C9 C8 SING N N 6 S9K C18 C19 SING Y N 7 S9K C2 O DOUB N N 8 S9K C2 N SING N N 9 S9K C16 C15 DOUB Y N 10 S9K C19 C14 DOUB Y N 11 S9K N C3 SING N N 12 S9K C8 C3 DOUB Y N 13 S9K C8 C7 SING Y N 14 S9K C3 C4 SING Y N 15 S9K C15 C14 SING Y N 16 S9K C7 C6 DOUB Y N 17 S9K C14 N2 SING N N 18 S9K C4 C5 DOUB Y N 19 S9K C6 C5 SING Y N 20 S9K C6 C10 SING N N 21 S9K N3 C10 DOUB Y N 22 S9K N3 C13 SING Y N 23 S9K N2 C13 SING N N 24 S9K C10 C11 SING Y N 25 S9K C13 N1 DOUB Y N 26 S9K N1 C12 SING Y N 27 S9K C11 C12 DOUB Y N 28 S9K C7 H1 SING N N 29 S9K C9 H2 SING N N 30 S9K C9 H3 SING N N 31 S9K N2 H4 SING N N 32 S9K C4 H5 SING N N 33 S9K C1 H6 SING N N 34 S9K C1 H7 SING N N 35 S9K N H8 SING N N 36 S9K C H9 SING N N 37 S9K C H10 SING N N 38 S9K C5 H11 SING N N 39 S9K C12 H12 SING N N 40 S9K C11 H13 SING N N 41 S9K C19 H14 SING N N 42 S9K C18 H15 SING N N 43 S9K C17 H16 SING N N 44 S9K C16 H17 SING N N 45 S9K C15 H18 SING N N 46 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S9K InChI InChI 1.03 "InChI=1S/C20H18N4O/c25-19-8-4-5-14-13-15(9-10-17(14)23-19)18-11-12-21-20(24-18)22-16-6-2-1-3-7-16/h1-3,6-7,9-13H,4-5,8H2,(H,23,25)(H,21,22,24)" S9K InChIKey InChI 1.03 YJONEAMNBLRMKD-UHFFFAOYSA-N S9K SMILES_CANONICAL CACTVS 3.385 "O=C1CCCc2cc(ccc2N1)c3ccnc(Nc4ccccc4)n3" S9K SMILES CACTVS 3.385 "O=C1CCCc2cc(ccc2N1)c3ccnc(Nc4ccccc4)n3" S9K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)Nc2nccc(n2)c3ccc4c(c3)CCCC(=O)N4" S9K SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)Nc2nccc(n2)c3ccc4c(c3)CCCC(=O)N4" # _pdbx_chem_comp_identifier.comp_id S9K _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "7-(2-phenylazanylpyrimidin-4-yl)-1,3,4,5-tetrahydro-1-benzazepin-2-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S9K "Create component" 2020-11-12 PDBE S9K "Initial release" 2021-01-13 RCSB ##