data_S9W # _chem_comp.id S9W _chem_comp.name "~{N}-[3-[[4-[(4-bromophenyl)methyl]piperazin-1-yl]methyl]phenyl]-4-methanoyl-oxane-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H30 Br N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-13 _chem_comp.pdbx_modified_date 2021-06-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 500.428 _chem_comp.one_letter_code ? _chem_comp.three_letter_code S9W _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AYR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal S9W C10 C1 C 0 1 N N N 82.145 80.515 -1.333 5.388 0.542 -0.446 C10 S9W 1 S9W C15 C2 C 0 1 Y N N 82.845 77.469 -5.371 2.566 -3.526 0.077 C15 S9W 2 S9W C14 C3 C 0 1 Y N N 82.114 77.204 -4.224 2.371 -2.386 -0.682 C14 S9W 3 S9W C13 C4 C 0 1 Y N N 82.002 78.180 -3.232 3.395 -1.473 -0.834 C13 S9W 4 S9W C12 C5 C 0 1 Y N N 82.654 79.418 -3.414 4.622 -1.699 -0.223 C12 S9W 5 S9W C8 C6 C 0 1 N N N 82.240 81.555 0.917 7.359 1.289 -1.718 C8 S9W 6 S9W C2 C7 C 0 1 N N N 82.009 81.824 -0.580 6.512 1.545 -0.498 C2 S9W 7 S9W C3 C8 C 0 1 N N N 82.908 82.948 -1.133 5.933 2.961 -0.564 C3 S9W 8 S9W C4 C9 C 0 1 N N N 82.565 84.260 -0.453 5.137 3.239 0.714 C4 S9W 9 S9W C6 C10 C 0 1 N N N 80.254 83.617 -0.201 6.524 1.749 1.990 C6 S9W 10 S9W C7 C11 C 0 1 N N N 80.589 82.282 -0.841 7.374 1.413 0.761 C7 S9W 11 S9W O5 O1 O 0 1 N N N 81.187 84.610 -0.577 5.988 3.071 1.850 O5 S9W 12 S9W O9 O2 O 0 1 N N N 81.340 81.402 1.752 7.079 0.386 -2.469 O9 S9W 13 S9W N11 N1 N 0 1 N N N 82.688 80.465 -2.533 5.662 -0.775 -0.375 N11 S9W 14 S9W C16 C12 C 0 1 Y N N 83.488 78.693 -5.565 3.784 -3.752 0.690 C16 S9W 15 S9W C17 C13 C 0 1 Y N N 83.393 79.656 -4.590 4.815 -2.845 0.538 C17 S9W 16 S9W C18 C14 C 0 1 N N N 81.426 75.862 -4.125 1.040 -2.141 -1.344 C18 S9W 17 S9W N19 N2 N 0 1 N N N 82.069 74.923 -3.201 0.171 -1.386 -0.432 N19 S9W 18 S9W C20 C15 C 0 1 N N N 83.355 74.493 -3.764 -0.173 -2.187 0.752 C20 S9W 19 S9W C21 C16 C 0 1 N N N 83.857 73.174 -3.148 -1.011 -1.339 1.712 C21 S9W 20 S9W N22 N3 N 0 1 N N N 82.850 72.084 -3.078 -2.224 -0.877 1.022 N22 S9W 21 S9W C23 C17 C 0 1 N N N 81.761 72.639 -2.262 -1.880 -0.076 -0.162 C23 S9W 22 S9W C24 C18 C 0 1 N N N 81.139 73.784 -3.051 -1.042 -0.924 -1.122 C24 S9W 23 S9W C25 C19 C 0 1 N N N 83.379 70.859 -2.408 -3.093 -0.121 1.934 C25 S9W 24 S9W C26 C20 C 0 1 Y N N 84.548 70.242 -3.144 -4.424 0.123 1.272 C26 S9W 25 S9W C27 C21 C 0 1 Y N N 84.488 70.342 -4.516 -4.617 1.260 0.509 C27 S9W 26 S9W C28 C22 C 0 1 Y N N 85.529 69.837 -5.272 -5.837 1.482 -0.103 C28 S9W 27 S9W C29 C23 C 0 1 Y N N 86.631 69.211 -4.691 -6.863 0.567 0.048 C29 S9W 28 S9W C30 C24 C 0 1 Y N N 86.710 69.081 -3.288 -6.669 -0.570 0.811 C30 S9W 29 S9W C31 C25 C 0 1 Y N N 85.652 69.619 -2.519 -5.450 -0.791 1.423 C31 S9W 30 S9W BR1 BR1 BR 0 0 N N N 87.900 68.610 -5.976 -8.532 0.872 -0.789 BR1 S9W 31 S9W O33 O3 O 0 1 N N N 81.685 79.550 -0.843 4.236 0.922 -0.463 O33 S9W 32 S9W H1 H1 H 0 1 N N N 82.919 76.709 -6.135 1.763 -4.239 0.194 H1 S9W 33 S9W H2 H2 H 0 1 N N N 81.425 77.990 -2.339 3.243 -0.583 -1.426 H2 S9W 34 S9W H3 H3 H 0 1 N N N 83.261 81.495 1.264 8.216 1.914 -1.920 H3 S9W 35 S9W H4 H4 H 0 1 N N N 83.962 82.701 -0.940 6.745 3.683 -0.651 H4 S9W 36 S9W H5 H5 H 0 1 N N N 82.747 83.045 -2.217 5.274 3.046 -1.428 H5 S9W 37 S9W H6 H6 H 0 1 N N N 82.810 84.175 0.616 4.759 4.261 0.692 H6 S9W 38 S9W H7 H7 H 0 1 N N N 83.171 85.058 -0.906 4.301 2.543 0.780 H7 S9W 39 S9W H8 H8 H 0 1 N N N 79.249 83.928 -0.523 5.706 1.033 2.072 H8 S9W 40 S9W H9 H9 H 0 1 N N N 80.270 83.505 0.893 7.143 1.699 2.885 H9 S9W 41 S9W H10 H10 H 0 1 N N N 80.447 82.372 -1.928 7.745 0.392 0.844 H10 S9W 42 S9W H11 H11 H 0 1 N N N 79.900 81.523 -0.443 8.215 2.104 0.701 H11 S9W 43 S9W H12 H12 H 0 1 N N N 83.179 81.283 -2.833 6.581 -1.083 -0.428 H12 S9W 44 S9W H13 H13 H 0 1 N N N 84.051 78.880 -6.467 3.934 -4.643 1.282 H13 S9W 45 S9W H14 H14 H 0 1 N N N 83.890 80.605 -4.726 5.766 -3.022 1.017 H14 S9W 46 S9W H15 H15 H 0 1 N N N 80.393 76.028 -3.785 1.189 -1.570 -2.260 H15 S9W 47 S9W H16 H16 H 0 1 N N N 81.413 75.406 -5.126 0.572 -3.096 -1.584 H16 S9W 48 S9W H18 H18 H 0 1 N N N 83.236 74.353 -4.849 -0.746 -3.062 0.445 H18 S9W 49 S9W H19 H19 H 0 1 N N N 84.103 75.277 -3.575 0.741 -2.507 1.252 H19 S9W 50 S9W H20 H20 H 0 1 N N N 84.704 72.817 -3.753 -1.292 -1.940 2.577 H20 S9W 51 S9W H21 H21 H 0 1 N N N 84.201 73.386 -2.125 -0.429 -0.478 2.040 H21 S9W 52 S9W H23 H23 H 0 1 N N N 81.006 71.864 -2.066 -2.794 0.244 -0.662 H23 S9W 53 S9W H24 H24 H 0 1 N N N 82.159 73.013 -1.307 -1.308 0.799 0.145 H24 S9W 54 S9W H25 H25 H 0 1 N N N 80.237 74.129 -2.525 -0.761 -0.323 -1.987 H25 S9W 55 S9W H26 H26 H 0 1 N N N 80.862 73.417 -4.051 -1.624 -1.785 -1.450 H26 S9W 56 S9W H27 H27 H 0 1 N N N 82.571 70.115 -2.348 -3.242 -0.693 2.850 H27 S9W 57 S9W H28 H28 H 0 1 N N N 83.706 71.128 -1.393 -2.625 0.834 2.174 H28 S9W 58 S9W H29 H29 H 0 1 N N N 83.640 70.808 -4.995 -3.816 1.974 0.391 H29 S9W 59 S9W H30 H30 H 0 1 N N N 85.487 69.930 -6.347 -5.988 2.370 -0.699 H30 S9W 60 S9W H31 H31 H 0 1 N N N 87.548 68.588 -2.818 -7.470 -1.284 0.929 H31 S9W 61 S9W H32 H32 H 0 1 N N N 85.688 69.553 -1.442 -5.297 -1.681 2.015 H32 S9W 62 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal S9W BR1 C29 SING N N 1 S9W C16 C15 DOUB Y N 2 S9W C16 C17 SING Y N 3 S9W C15 C14 SING Y N 4 S9W C28 C29 DOUB Y N 5 S9W C28 C27 SING Y N 6 S9W C29 C30 SING Y N 7 S9W C17 C12 DOUB Y N 8 S9W C27 C26 DOUB Y N 9 S9W C14 C18 SING N N 10 S9W C14 C13 DOUB Y N 11 S9W C18 N19 SING N N 12 S9W C20 N19 SING N N 13 S9W C20 C21 SING N N 14 S9W C12 C13 SING Y N 15 S9W C12 N11 SING N N 16 S9W C30 C31 DOUB Y N 17 S9W N19 C24 SING N N 18 S9W C21 N22 SING N N 19 S9W C26 C31 SING Y N 20 S9W C26 C25 SING N N 21 S9W N22 C25 SING N N 22 S9W N22 C23 SING N N 23 S9W C24 C23 SING N N 24 S9W N11 C10 SING N N 25 S9W C10 O33 DOUB N N 26 S9W C10 C2 SING N N 27 S9W C3 C2 SING N N 28 S9W C3 C4 SING N N 29 S9W C7 C2 SING N N 30 S9W C7 C6 SING N N 31 S9W C2 C8 SING N N 32 S9W O5 C4 SING N N 33 S9W O5 C6 SING N N 34 S9W C8 O9 DOUB N N 35 S9W C15 H1 SING N N 36 S9W C13 H2 SING N N 37 S9W C8 H3 SING N N 38 S9W C3 H4 SING N N 39 S9W C3 H5 SING N N 40 S9W C4 H6 SING N N 41 S9W C4 H7 SING N N 42 S9W C6 H8 SING N N 43 S9W C6 H9 SING N N 44 S9W C7 H10 SING N N 45 S9W C7 H11 SING N N 46 S9W N11 H12 SING N N 47 S9W C16 H13 SING N N 48 S9W C17 H14 SING N N 49 S9W C18 H15 SING N N 50 S9W C18 H16 SING N N 51 S9W C20 H18 SING N N 52 S9W C20 H19 SING N N 53 S9W C21 H20 SING N N 54 S9W C21 H21 SING N N 55 S9W C23 H23 SING N N 56 S9W C23 H24 SING N N 57 S9W C24 H25 SING N N 58 S9W C24 H26 SING N N 59 S9W C25 H27 SING N N 60 S9W C25 H28 SING N N 61 S9W C27 H29 SING N N 62 S9W C28 H30 SING N N 63 S9W C30 H31 SING N N 64 S9W C31 H32 SING N N 65 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor S9W InChI InChI 1.03 "InChI=1S/C25H30BrN3O3/c26-22-6-4-20(5-7-22)17-28-10-12-29(13-11-28)18-21-2-1-3-23(16-21)27-24(31)25(19-30)8-14-32-15-9-25/h1-7,16,19H,8-15,17-18H2,(H,27,31)" S9W InChIKey InChI 1.03 PPXXFRMHSKGYSK-UHFFFAOYSA-N S9W SMILES_CANONICAL CACTVS 3.385 "Brc1ccc(CN2CCN(CC2)Cc3cccc(NC(=O)C4(CCOCC4)C=O)c3)cc1" S9W SMILES CACTVS 3.385 "Brc1ccc(CN2CCN(CC2)Cc3cccc(NC(=O)C4(CCOCC4)C=O)c3)cc1" S9W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)NC(=O)C2(CCOCC2)C=O)CN3CCN(CC3)Cc4ccc(cc4)Br" S9W SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)NC(=O)C2(CCOCC2)C=O)CN3CCN(CC3)Cc4ccc(cc4)Br" # _pdbx_chem_comp_identifier.comp_id S9W _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[3-[[4-[(4-bromophenyl)methyl]piperazin-1-yl]methyl]phenyl]-4-methanoyl-oxane-4-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site S9W "Create component" 2020-11-13 PDBE S9W "Initial release" 2021-06-30 RCSB ##