data_SAK # _chem_comp.id SAK _chem_comp.name "(2S)-5-hydroxy-2-(4-hydroxyphenyl)-7-methoxy-2,3-dihydro-4H-chromen-4-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H14 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms sakuranetin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-05-12 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 286.279 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SAK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3D04 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SAK CAG CAG C 0 1 Y N N 18.881 16.172 -11.460 -3.459 -0.505 -1.145 CAG SAK 1 SAK CAE CAE C 0 1 Y N N 20.210 15.974 -11.867 -4.782 -0.154 -0.964 CAE SAK 2 SAK CAO CAO C 0 1 Y N N 20.655 14.663 -12.177 -5.143 0.661 0.099 CAO SAK 3 SAK OAC OAC O 0 1 N N N 21.935 14.471 -12.568 -6.444 1.008 0.280 OAC SAK 4 SAK CAF CAF C 0 1 Y N N 19.788 13.551 -12.093 -4.173 1.122 0.977 CAF SAK 5 SAK CAH CAH C 0 1 Y N N 18.453 13.752 -11.676 -2.850 0.769 0.791 CAH SAK 6 SAK CAR CAR C 0 1 Y N N 18.010 15.062 -11.367 -2.493 -0.044 -0.269 CAR SAK 7 SAK CAU CAU C 0 1 N N S 16.558 15.307 -10.929 -1.050 -0.429 -0.469 CAU SAK 8 SAK OAM OAM O 0 1 N N N 15.774 15.929 -11.995 -0.209 0.659 -0.085 OAM SAK 9 SAK CAK CAK C 0 1 N N N 15.856 14.000 -10.512 -0.722 -1.655 0.395 CAK SAK 10 SAK CAN CAN C 0 1 N N N 14.384 14.316 -10.221 0.746 -1.976 0.179 CAN SAK 11 SAK OAB OAB O 0 1 N N N 13.836 13.572 -9.400 1.141 -3.120 0.081 OAB SAK 12 SAK CAT CAT C 0 1 Y N N 13.695 15.369 -10.835 1.662 -0.834 0.095 CAT SAK 13 SAK CAS CAS C 0 1 Y N N 14.450 16.182 -11.721 1.129 0.461 -0.043 CAS SAK 14 SAK CAJ CAJ C 0 1 Y N N 13.844 17.271 -12.378 1.990 1.541 -0.134 CAJ SAK 15 SAK CAP CAP C 0 1 Y N N 12.483 17.563 -12.153 3.364 1.346 -0.084 CAP SAK 16 SAK OAL OAL O 0 1 N N N 11.973 18.623 -12.861 4.197 2.413 -0.176 OAL SAK 17 SAK CAA CAA C 0 1 N N N 10.752 19.267 -12.439 5.600 2.147 -0.119 CAA SAK 18 SAK CAI CAI C 0 1 Y N N 11.734 16.755 -11.273 3.894 0.069 0.059 CAI SAK 19 SAK CAQ CAQ C 0 1 Y N N 12.326 15.662 -10.622 3.052 -1.024 0.150 CAQ SAK 20 SAK OAD OAD O 0 1 N N N 11.524 14.942 -9.786 3.565 -2.272 0.292 OAD SAK 21 SAK HAG HAG H 0 1 N N N 18.527 17.164 -11.220 -3.178 -1.144 -1.970 HAG SAK 22 SAK HAE HAE H 0 1 N N N 20.887 16.812 -11.943 -5.536 -0.514 -1.648 HAE SAK 23 SAK HOAC HOAC H 0 0 N N N 21.974 14.426 -13.516 -6.940 0.395 0.840 HOAC SAK 24 SAK HAF HAF H 0 1 N N N 20.140 12.561 -12.344 -4.451 1.758 1.805 HAF SAK 25 SAK HAH HAH H 0 1 N N N 17.776 12.914 -11.594 -2.095 1.128 1.474 HAH SAK 26 SAK HAU HAU H 0 1 N N N 16.612 15.984 -10.064 -0.880 -0.668 -1.519 HAU SAK 27 SAK HAK HAK H 0 1 N N N 15.926 13.262 -11.325 -0.902 -1.427 1.446 HAK SAK 28 SAK HAKA HAKA H 0 0 N N N 16.337 13.581 -9.616 -1.336 -2.501 0.088 HAKA SAK 29 SAK HAJ HAJ H 0 1 N N N 14.422 17.883 -13.055 1.591 2.539 -0.245 HAJ SAK 30 SAK HAA HAA H 0 1 N N N 10.780 19.431 -11.352 5.879 1.486 -0.940 HAA SAK 31 SAK HAAA HAAA H 0 0 N N N 10.651 20.234 -12.953 6.151 3.083 -0.204 HAAA SAK 32 SAK HAAB HAAB H 0 0 N N N 9.894 18.626 -12.691 5.841 1.668 0.831 HAAB SAK 33 SAK HAI HAI H 0 1 N N N 10.692 16.980 -11.098 4.964 -0.069 0.099 HAI SAK 34 SAK HOAD HOAD H 0 0 N N N 11.984 14.775 -8.972 3.736 -2.724 -0.546 HOAD SAK 35 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SAK CAG CAE DOUB Y N 1 SAK CAG CAR SING Y N 2 SAK CAE CAO SING Y N 3 SAK CAO OAC SING N N 4 SAK CAO CAF DOUB Y N 5 SAK CAF CAH SING Y N 6 SAK CAH CAR DOUB Y N 7 SAK CAR CAU SING N N 8 SAK CAU OAM SING N N 9 SAK CAU CAK SING N N 10 SAK OAM CAS SING N N 11 SAK CAK CAN SING N N 12 SAK CAN OAB DOUB N N 13 SAK CAN CAT SING N N 14 SAK CAT CAS DOUB Y N 15 SAK CAT CAQ SING Y N 16 SAK CAS CAJ SING Y N 17 SAK CAJ CAP DOUB Y N 18 SAK CAP OAL SING N N 19 SAK CAP CAI SING Y N 20 SAK OAL CAA SING N N 21 SAK CAI CAQ DOUB Y N 22 SAK CAQ OAD SING N N 23 SAK CAG HAG SING N N 24 SAK CAE HAE SING N N 25 SAK OAC HOAC SING N N 26 SAK CAF HAF SING N N 27 SAK CAH HAH SING N N 28 SAK CAU HAU SING N N 29 SAK CAK HAK SING N N 30 SAK CAK HAKA SING N N 31 SAK CAJ HAJ SING N N 32 SAK CAA HAA SING N N 33 SAK CAA HAAA SING N N 34 SAK CAA HAAB SING N N 35 SAK CAI HAI SING N N 36 SAK OAD HOAD SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SAK SMILES ACDLabs 10.04 "O=C2c3c(OC(c1ccc(O)cc1)C2)cc(OC)cc3O" SAK SMILES_CANONICAL CACTVS 3.341 "COc1cc(O)c2C(=O)C[C@H](Oc2c1)c3ccc(O)cc3" SAK SMILES CACTVS 3.341 "COc1cc(O)c2C(=O)C[CH](Oc2c1)c3ccc(O)cc3" SAK SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "COc1cc(c2c(c1)O[C@@H](CC2=O)c3ccc(cc3)O)O" SAK SMILES "OpenEye OEToolkits" 1.5.0 "COc1cc(c2c(c1)OC(CC2=O)c3ccc(cc3)O)O" SAK InChI InChI 1.03 "InChI=1S/C16H14O5/c1-20-11-6-12(18)16-13(19)8-14(21-15(16)7-11)9-2-4-10(17)5-3-9/h2-7,14,17-18H,8H2,1H3/t14-/m0/s1" SAK InChIKey InChI 1.03 DJOJDHGQRNZXQQ-AWEZNQCLSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SAK "SYSTEMATIC NAME" ACDLabs 10.04 "(2S)-5-hydroxy-2-(4-hydroxyphenyl)-7-methoxy-2,3-dihydro-4H-chromen-4-one" SAK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S)-5-hydroxy-2-(4-hydroxyphenyl)-7-methoxy-chroman-4-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SAK "Create component" 2008-05-12 PDBJ SAK "Modify aromatic_flag" 2011-06-04 RCSB SAK "Modify descriptor" 2011-06-04 RCSB SAK "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id SAK _pdbx_chem_comp_synonyms.name sakuranetin _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##