data_SBP # _chem_comp.id SBP _chem_comp.name "[3-(1,3,2-DIOXABOROLAN-2-YLOXY)PROPYL]GUANIDINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H15 B N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2004-01-26 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 188.013 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SBP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1S6F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SBP BD BD B 0 1 N N N N N N 35.766 27.189 7.939 2.769 -0.385 -0.059 BD SBP 1 SBP OE1 OE1 O 0 1 N N N N N N 35.021 27.086 9.164 1.552 -1.113 0.021 OE1 SBP 2 SBP OE2 OE2 O 0 1 N N N N N N 36.934 26.306 8.018 4.075 -0.952 -0.032 OE2 SBP 3 SBP OE3 OE3 O 0 1 N N N N N N 35.047 26.775 6.763 2.879 1.034 -0.185 OE3 SBP 4 SBP CZ2 CZ2 C 0 1 N N N N N N 37.058 25.570 6.787 5.019 0.135 -0.108 CZ2 SBP 5 SBP CZ3 CZ3 C 0 1 N N N N N N 35.731 25.748 6.022 4.184 1.353 0.360 CZ3 SBP 6 SBP CZ1 CZ1 C 0 1 N N N N N N 34.223 28.206 9.548 0.493 -0.156 -0.042 CZ1 SBP 7 SBP CH CH C 0 1 N N N N N N 33.518 27.906 10.852 -0.853 -0.878 0.039 CH SBP 8 SBP CQ CQ C 0 1 N N N N N N 32.783 29.142 11.375 -1.987 0.146 -0.029 CQ SBP 9 SBP NI NI N 0 1 N N N N N N 32.146 28.791 12.638 -3.276 -0.546 0.049 NI SBP 10 SBP CK CK C 0 1 N N N N N N 31.328 29.586 13.333 -4.440 0.171 0.008 CK SBP 11 SBP NL1 NL1 N 1 1 N N N N N N 31.051 30.812 12.897 -5.612 -0.459 0.079 NL1 SBP 12 SBP NL2 NL2 N 0 1 N N N N N N 30.817 29.163 14.493 -4.403 1.497 -0.104 NL2 SBP 13 SBP HZ22 2HZ2 H 0 0 N N N N N N 37.262 24.519 6.975 5.860 -0.037 0.564 HZ22 SBP 14 SBP HZ23 3HZ2 H 0 0 N N N N N N 37.869 26.014 6.208 5.365 0.275 -1.132 HZ23 SBP 15 SBP HZ32 2HZ3 H 0 0 N N N N N N 35.185 24.805 6.051 4.153 1.411 1.448 HZ32 SBP 16 SBP HZ33 3HZ3 H 0 0 N N N N N N 35.912 26.048 4.994 4.568 2.278 -0.068 HZ33 SBP 17 SBP HZ12 2HZ1 H 0 0 N N N N N N 34.846 29.088 9.696 0.555 0.393 -0.982 HZ12 SBP 18 SBP HZ13 3HZ1 H 0 0 N N N N N N 33.485 28.402 8.768 0.583 0.541 0.791 HZ13 SBP 19 SBP HH2 2HH H 0 1 N N N N N N 34.261 27.597 11.586 -0.915 -1.427 0.979 HH2 SBP 20 SBP HH3 3HH H 0 1 N N N N N N 32.832 27.075 10.697 -0.942 -1.575 -0.794 HH3 SBP 21 SBP HQ2 2HQ H 0 1 N N N N N N 32.025 29.444 10.651 -1.925 0.695 -0.969 HQ2 SBP 22 SBP HQ3 3HQ H 0 1 N N N N N N 33.477 29.966 11.547 -1.898 0.843 0.805 HQ3 SBP 23 SBP HI HI H 0 1 N N N N N N 32.338 27.867 12.990 -3.303 -1.512 0.131 HI SBP 24 SBP HL11 1HL1 H 0 0 N N N N N N 31.389 31.097 11.992 -6.438 0.049 0.049 HL11 SBP 25 SBP HL12 2HL1 H 0 0 N N N N N N 30.506 31.447 13.461 -5.640 -1.425 0.160 HL12 SBP 26 SBP HL21 1HL2 H 0 0 N N N N N N 31.005 28.233 14.839 -3.549 1.956 -0.155 HL21 SBP 27 SBP HL22 2HL2 H 0 0 N N N N N N 30.320 29.827 15.064 -5.228 2.005 -0.137 HL22 SBP 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SBP BD OE1 SING N N 1 SBP BD OE2 SING N N 2 SBP BD OE3 SING N N 3 SBP OE1 CZ1 SING N N 4 SBP OE2 CZ2 SING N N 5 SBP OE3 CZ3 SING N N 6 SBP CZ2 CZ3 SING N N 7 SBP CZ2 HZ22 SING N N 8 SBP CZ2 HZ23 SING N N 9 SBP CZ3 HZ32 SING N N 10 SBP CZ3 HZ33 SING N N 11 SBP CZ1 CH SING N N 12 SBP CZ1 HZ12 SING N N 13 SBP CZ1 HZ13 SING N N 14 SBP CH CQ SING N N 15 SBP CH HH2 SING N N 16 SBP CH HH3 SING N N 17 SBP CQ NI SING N N 18 SBP CQ HQ2 SING N N 19 SBP CQ HQ3 SING N N 20 SBP NI CK SING N N 21 SBP NI HI SING N N 22 SBP CK NL1 DOUB N N 23 SBP CK NL2 SING N N 24 SBP NL1 HL11 SING N N 25 SBP NL1 HL12 SING N N 26 SBP NL2 HL21 SING N N 27 SBP NL2 HL22 SING N N 28 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SBP SMILES ACDLabs 10.04 "O(B1OCCO1)CCCNC(=[NH2+])\N" SBP SMILES_CANONICAL CACTVS 3.341 "NC(=[NH2+])NCCCOB1OCCO1" SBP SMILES CACTVS 3.341 "NC(=[NH2+])NCCCOB1OCCO1" SBP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "B1(OCCO1)OCCCNC(=[NH2+])N" SBP SMILES "OpenEye OEToolkits" 1.5.0 "B1(OCCO1)OCCCNC(=[NH2+])N" SBP InChI InChI 1.03 "InChI=1S/C6H14BN3O3/c8-6(9)10-2-1-3-11-7-12-4-5-13-7/h1-5H2,(H4,8,9,10)/p+1" SBP InChIKey InChI 1.03 QHANCKHXGBJANE-UHFFFAOYSA-O # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SBP "SYSTEMATIC NAME" ACDLabs 10.04 "amino{[3-(1,3,2-dioxaborolan-2-yloxy)propyl]amino}methaniminium" SBP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[amino-[3-(1,3,2-dioxaborolan-2-yloxy)propylamino]methylidene]azanium" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SBP "Create component" 2004-01-26 RCSB SBP "Modify descriptor" 2011-06-04 RCSB SBP "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id SBP _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom BD _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #