data_SDK # _chem_comp.id SDK _chem_comp.name "1,3-BIS[[N-[(PHENYLMETHOXY)CARBONYL]-L-LEUCYL]AMINO]-2-PROPANONE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H42 N4 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "SYMMETRIC DIACYLAMINOETHYL KETONE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 582.688 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SDK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1AU0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SDK C1 C1 C 0 1 Y N N N N N 0.130 37.037 62.798 -2.484 0.055 12.823 C1 SDK 1 SDK C2 C2 C 0 1 Y N N N N N 0.177 38.189 63.596 -1.288 -0.602 12.611 C2 SDK 2 SDK C3 C3 C 0 1 Y N N N N N 1.373 38.894 63.736 -0.510 -0.286 11.513 C3 SDK 3 SDK C4 C4 C 0 1 Y N N N N N 2.525 38.463 63.090 -0.930 0.688 10.627 C4 SDK 4 SDK C5 C5 C 0 1 Y N N N N N 2.463 37.317 62.295 -2.124 1.350 10.842 C5 SDK 5 SDK C6 C6 C 0 1 Y N N N N N 1.274 36.603 62.148 -2.904 1.030 11.938 C6 SDK 6 SDK C7 C7 C 0 1 N N N N N N 3.829 39.195 63.276 -0.082 1.033 9.429 C7 SDK 7 SDK O8 O8 O 0 1 N N N N N N 4.415 39.079 64.586 -0.464 0.193 8.308 O8 SDK 8 SDK C9 C9 C 0 1 N N N N N N 5.752 38.656 64.619 0.162 0.325 7.124 C9 SDK 9 SDK O10 O10 O 0 1 N N N N N N 6.619 39.264 63.982 1.047 1.148 6.993 O10 SDK 10 SDK C11 C11 C 0 1 N N S N N N 7.300 36.903 65.495 0.546 -0.369 4.820 C11 SDK 11 SDK C12 C12 C 0 1 N N N N N N 8.225 37.188 64.304 1.405 -1.623 4.646 C12 SDK 12 SDK C13 C13 C 0 1 N N N N N N 8.263 36.155 63.175 2.469 -1.670 5.744 C13 SDK 13 SDK C14 C14 C 0 1 N N N N N N 9.565 36.310 62.407 3.228 -2.996 5.663 C14 SDK 14 SDK C15 C15 C 0 1 N N N N N N 8.100 34.713 63.693 3.448 -0.509 5.554 C15 SDK 15 SDK C16 C16 C 0 1 N N N N N N 8.102 36.995 66.795 -0.427 -0.264 3.675 C16 SDK 16 SDK O17 O17 O 0 1 N N N N N N 8.474 35.956 67.354 -1.620 -0.260 3.893 O17 SDK 17 SDK N18 N18 N 0 1 N N N N N N 8.410 38.196 67.287 0.026 -0.174 2.410 N18 SDK 18 SDK C19 C19 C 0 1 N N N N N N 9.204 38.394 68.511 -0.920 -0.072 1.297 C19 SDK 19 SDK N20 N20 N 0 1 N N N N N N 5.986 37.562 65.351 -0.191 -0.454 6.083 N20 SDK 20 SDK C21 C21 C 0 1 N N N N N N 8.486 39.168 69.595 -0.161 0.014 -0.001 C21 SDK 21 SDK O22 O22 O 0 1 N N N N N N 7.604 39.863 69.099 1.045 -0.006 0.001 O22 SDK 22 SDK C23 C23 C 0 1 Y N N N N N 18.574 35.216 73.806 -2.543 -0.074 -12.785 C23 SDK 23 SDK C24 C24 C 0 1 Y N N N N N 17.211 35.385 73.580 -1.336 0.573 -12.598 C24 SDK 24 SDK C25 C25 C 0 1 Y N N N N N 16.780 36.393 72.734 -0.545 0.260 -11.508 C25 SDK 25 SDK C26 C26 C 0 1 Y N N N N N 17.688 37.248 72.100 -0.962 -0.700 -10.605 C26 SDK 26 SDK C27 C27 C 0 1 Y N N N N N 19.047 37.074 72.335 -2.166 -1.351 -10.795 C27 SDK 27 SDK C28 C28 C 0 1 Y N N N N N 19.498 36.065 73.182 -2.959 -1.035 -11.882 C28 SDK 28 SDK C29 C29 C 0 1 N N N N N N 17.210 38.324 71.159 -0.099 -1.041 -9.417 C29 SDK 29 SDK O30 O30 O 0 1 N N N N N N 16.137 38.057 70.241 -0.454 -0.185 -8.300 O30 SDK 30 SDK C31 C31 C 0 1 N N N N N N 14.829 37.780 70.706 0.189 -0.311 -7.124 C31 SDK 31 SDK O32 O32 O 0 1 N N N N N N 14.369 36.636 70.706 1.067 -1.141 -6.998 O32 SDK 32 SDK C33 C33 C 0 1 N N S N N N 12.740 38.598 71.650 0.586 0.373 -4.820 C33 SDK 33 SDK C34 C34 C 0 1 N N N N N N 12.676 38.712 73.171 1.487 1.597 -4.640 C34 SDK 34 SDK C35 C35 C 0 1 N N N N N N 12.841 37.432 73.970 2.513 1.645 -5.774 C35 SDK 35 SDK C36 C36 C 0 1 N N N N N N 12.557 36.209 73.097 3.324 2.938 -5.673 C36 SDK 36 SDK C37 C37 C 0 1 N N N N N N 14.256 37.403 74.485 3.453 0.443 -5.663 C37 SDK 37 SDK C38 C38 C 0 1 N N N N N N 11.771 39.592 71.035 -0.397 0.302 -3.680 C38 SDK 38 SDK O39 O39 O 0 1 N N N N N N 12.168 40.691 70.663 -1.588 0.340 -3.905 O39 SDK 39 SDK N40 N40 N 0 1 N N N N N N 10.502 39.203 70.936 0.046 0.197 -2.412 N40 SDK 40 SDK C41 C41 C 0 1 N N N N N N 9.430 40.021 70.368 -0.909 0.128 -1.305 C41 SDK 41 SDK N42 N42 N 0 1 N N N N N N 14.107 38.804 71.159 -0.140 0.483 -6.087 N42 SDK 42 SDK H1 H1 H 0 1 N N N N N N -0.809 36.470 62.681 -3.092 -0.192 13.681 H1 SDK 43 SDK H2 H2 H 0 1 N N N N N N -0.729 38.541 64.115 -0.960 -1.364 13.303 H2 SDK 44 SDK H3 H3 H 0 1 N N N N N N 1.408 39.800 64.363 0.424 -0.800 11.346 H3 SDK 45 SDK H5 H5 H 0 1 N N N N N N 3.370 36.969 61.773 -2.452 2.112 10.150 H5 SDK 46 SDK H6 H6 H 0 1 N N N N N N 1.238 35.697 61.519 -3.839 1.545 12.104 H6 SDK 47 SDK H71 1H7 H 0 1 N N N N N N 4.561 38.877 62.498 0.967 0.867 9.667 H71 SDK 48 SDK H72 2H7 H 0 1 N N N N N N 3.708 40.269 63.003 -0.234 2.080 9.167 H72 SDK 49 SDK H11 H11 H 0 1 N N N N N N 6.938 35.848 65.531 1.188 0.511 4.833 H11 SDK 50 SDK H121 1H12 H 0 0 N N N N N N 7.980 38.189 63.879 1.890 -1.599 3.670 H121 SDK 51 SDK H122 2H12 H 0 0 N N N N N N 9.261 37.365 64.676 0.772 -2.509 4.715 H122 SDK 52 SDK H13 H13 H 0 1 N N N N N N 7.397 36.344 62.497 1.989 -1.584 6.719 H13 SDK 53 SDK H141 1H14 H 0 0 N N N N N N 9.592 35.557 61.584 3.987 -3.028 6.445 H141 SDK 54 SDK H142 2H14 H 0 0 N N N N N N 9.718 37.350 62.036 2.531 -3.822 5.798 H142 SDK 55 SDK H143 3H14 H 0 0 N N N N N N 10.459 36.247 63.070 3.708 -3.081 4.688 H143 SDK 56 SDK H151 1H15 H 0 0 N N N N N N 8.127 33.960 62.870 3.854 -0.538 4.543 H151 SDK 57 SDK H152 2H15 H 0 0 N N N N N N 8.857 34.479 64.477 2.927 0.434 5.709 H152 SDK 58 SDK H153 3H15 H 0 0 N N N N N N 7.172 34.607 64.303 4.261 -0.598 6.274 H153 SDK 59 SDK HN8 HN8 H 0 1 N N N N N N 8.038 38.963 66.727 0.981 -0.177 2.236 HN8 SDK 60 SDK H191 1H19 H 0 0 N N N N N N 9.566 37.415 68.904 -1.562 -0.953 1.284 H191 SDK 61 SDK H192 2H19 H 0 0 N N N N N N 10.180 38.874 68.269 -1.532 0.821 1.421 H192 SDK 62 SDK HN2 HN2 H 0 1 N N N N N N 5.141 37.221 65.810 -0.934 -1.071 6.170 HN2 SDK 63 SDK H23 H23 H 0 1 N N N N N N 18.920 34.412 74.477 -3.161 0.170 -13.636 H23 SDK 64 SDK H24 H24 H 0 1 N N N N N N 16.476 34.723 74.068 -1.011 1.323 -13.303 H24 SDK 65 SDK H25 H25 H 0 1 N N N N N N 15.697 36.516 72.562 0.397 0.766 -11.362 H25 SDK 66 SDK H27 H27 H 0 1 N N N N N N 19.774 37.742 71.844 -2.491 -2.102 -10.090 H27 SDK 67 SDK H28 H28 H 0 1 N N N N N N 20.579 35.939 73.357 -3.902 -1.541 -12.028 H28 SDK 68 SDK H291 1H29 H 0 0 N N N N N N 16.941 39.223 71.760 0.948 -0.888 -9.674 H291 SDK 69 SDK H292 2H29 H 0 0 N N N N N N 18.085 38.696 70.577 -0.258 -2.083 -9.141 H292 SDK 70 SDK H33 H33 H 0 1 N N N N N N 12.441 37.567 71.346 1.197 -0.529 -4.829 H33 SDK 71 SDK H341 1H34 H 0 0 N N N N N N 13.422 39.464 73.518 0.879 2.501 -4.661 H341 SDK 72 SDK H342 2H34 H 0 0 N N N N N N 11.724 39.212 73.465 2.005 1.529 -3.684 H342 SDK 73 SDK H35 H35 H 0 1 N N N N N N 12.117 37.404 74.817 1.996 1.615 -6.733 H35 SDK 74 SDK H361 1H36 H 0 0 N N N N N N 12.678 35.268 73.683 4.056 2.973 -6.480 H361 SDK 75 SDK H362 2H36 H 0 0 N N N N N N 11.553 36.269 72.615 2.655 3.795 -5.752 H362 SDK 76 SDK H363 3H36 H 0 0 N N N N N N 13.184 36.204 72.175 3.841 2.969 -4.713 H363 SDK 77 SDK H371 1H37 H 0 0 N N N N N N 14.377 36.462 75.071 3.905 0.426 -4.671 H371 SDK 78 SDK H372 2H37 H 0 0 N N N N N N 15.016 37.513 73.676 2.889 -0.475 -5.822 H372 SDK 79 SDK H373 3H37 H 0 0 N N N N N N 14.527 38.316 75.064 4.236 0.523 -6.417 H373 SDK 80 SDK HN4 HN4 H 0 1 N N N N N N 10.348 38.263 71.301 0.999 0.166 -2.233 HN4 SDK 81 SDK H411 1H41 H 0 0 N N N N N N 9.828 40.862 69.754 -1.551 -0.743 -1.432 H411 SDK 82 SDK H412 2H41 H 0 0 N N N N N N 8.905 40.620 71.148 -1.520 1.030 -1.296 H412 SDK 83 SDK HN HN H 0 1 N N N N N N 14.580 39.707 71.131 -0.858 1.128 -6.179 HN SDK 84 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SDK C1 C2 DOUB Y N 1 SDK C1 C6 SING Y N 2 SDK C1 H1 SING N N 3 SDK C2 C3 SING Y N 4 SDK C2 H2 SING N N 5 SDK C3 C4 DOUB Y N 6 SDK C3 H3 SING N N 7 SDK C4 C5 SING Y N 8 SDK C4 C7 SING N N 9 SDK C5 C6 DOUB Y N 10 SDK C5 H5 SING N N 11 SDK C6 H6 SING N N 12 SDK C7 O8 SING N N 13 SDK C7 H71 SING N N 14 SDK C7 H72 SING N N 15 SDK O8 C9 SING N N 16 SDK C9 O10 DOUB N N 17 SDK C9 N20 SING N N 18 SDK C11 C12 SING N N 19 SDK C11 C16 SING N N 20 SDK C11 N20 SING N N 21 SDK C11 H11 SING N N 22 SDK C12 C13 SING N N 23 SDK C12 H121 SING N N 24 SDK C12 H122 SING N N 25 SDK C13 C14 SING N N 26 SDK C13 C15 SING N N 27 SDK C13 H13 SING N N 28 SDK C14 H141 SING N N 29 SDK C14 H142 SING N N 30 SDK C14 H143 SING N N 31 SDK C15 H151 SING N N 32 SDK C15 H152 SING N N 33 SDK C15 H153 SING N N 34 SDK C16 O17 DOUB N N 35 SDK C16 N18 SING N N 36 SDK N18 C19 SING N N 37 SDK N18 HN8 SING N N 38 SDK C19 C21 SING N N 39 SDK C19 H191 SING N N 40 SDK C19 H192 SING N N 41 SDK N20 HN2 SING N N 42 SDK C21 O22 DOUB N N 43 SDK C21 C41 SING N N 44 SDK C23 C24 DOUB Y N 45 SDK C23 C28 SING Y N 46 SDK C23 H23 SING N N 47 SDK C24 C25 SING Y N 48 SDK C24 H24 SING N N 49 SDK C25 C26 DOUB Y N 50 SDK C25 H25 SING N N 51 SDK C26 C27 SING Y N 52 SDK C26 C29 SING N N 53 SDK C27 C28 DOUB Y N 54 SDK C27 H27 SING N N 55 SDK C28 H28 SING N N 56 SDK C29 O30 SING N N 57 SDK C29 H291 SING N N 58 SDK C29 H292 SING N N 59 SDK O30 C31 SING N N 60 SDK C31 O32 DOUB N N 61 SDK C31 N42 SING N N 62 SDK C33 C34 SING N N 63 SDK C33 C38 SING N N 64 SDK C33 N42 SING N N 65 SDK C33 H33 SING N N 66 SDK C34 C35 SING N N 67 SDK C34 H341 SING N N 68 SDK C34 H342 SING N N 69 SDK C35 C36 SING N N 70 SDK C35 C37 SING N N 71 SDK C35 H35 SING N N 72 SDK C36 H361 SING N N 73 SDK C36 H362 SING N N 74 SDK C36 H363 SING N N 75 SDK C37 H371 SING N N 76 SDK C37 H372 SING N N 77 SDK C37 H373 SING N N 78 SDK C38 O39 DOUB N N 79 SDK C38 N40 SING N N 80 SDK N40 C41 SING N N 81 SDK N40 HN4 SING N N 82 SDK C41 H411 SING N N 83 SDK C41 H412 SING N N 84 SDK N42 HN SING N N 85 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SDK SMILES ACDLabs 10.04 "O=C(OCc1ccccc1)NC(C(=O)NCC(=O)CNC(=O)C(NC(=O)OCc2ccccc2)CC(C)C)CC(C)C" SDK SMILES_CANONICAL CACTVS 3.341 "CC(C)C[C@H](NC(=O)OCc1ccccc1)C(=O)NCC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)OCc2ccccc2" SDK SMILES CACTVS 3.341 "CC(C)C[CH](NC(=O)OCc1ccccc1)C(=O)NCC(=O)CNC(=O)[CH](CC(C)C)NC(=O)OCc2ccccc2" SDK SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(C)C[C@@H](C(=O)NCC(=O)CNC(=O)[C@H](CC(C)C)NC(=O)OCc1ccccc1)NC(=O)OCc2ccccc2" SDK SMILES "OpenEye OEToolkits" 1.5.0 "CC(C)CC(C(=O)NCC(=O)CNC(=O)C(CC(C)C)NC(=O)OCc1ccccc1)NC(=O)OCc2ccccc2" SDK InChI InChI 1.03 "InChI=1S/C31H42N4O7/c1-21(2)15-26(34-30(39)41-19-23-11-7-5-8-12-23)28(37)32-17-25(36)18-33-29(38)27(16-22(3)4)35-31(40)42-20-24-13-9-6-10-14-24/h5-14,21-22,26-27H,15-20H2,1-4H3,(H,32,37)(H,33,38)(H,34,39)(H,35,40)/t26-,27-/m0/s1" SDK InChIKey InChI 1.03 APGQPPIXNOCMOK-SVBPBHIXSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SDK "SYSTEMATIC NAME" ACDLabs 10.04 "benzyl [(1S,9S)-1,9-bis(2-methylpropyl)-2,5,8,11-tetraoxo-13-phenyl-12-oxa-3,7,10-triazatridec-1-yl]carbamate (non-preferred name)" SDK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "phenylmethyl N-[(2S)-4-methyl-1-[[3-[[(2S)-4-methyl-2-phenylmethoxycarbonylamino-pentanoyl]amino]-2-oxo-propyl]amino]-1-oxo-pentan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SDK "Create component" 1999-07-08 RCSB SDK "Modify descriptor" 2011-06-04 RCSB SDK "Modify synonyms" 2021-03-01 PDBE SDK "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id SDK _pdbx_chem_comp_synonyms.name "SYMMETRIC DIACYLAMINOETHYL KETONE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id SDK _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C21 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #