data_SE3 # _chem_comp.id SE3 _chem_comp.name "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-2-[(4-chlorophenyl)amino]-2-methyl-propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H21 Cl N4 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-15 _chem_comp.pdbx_modified_date 2023-07-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 412.936 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SE3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BYY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SE3 C10 C1 C 0 1 Y N N -17.131 -22.172 2.721 -4.806 -1.934 1.547 C10 SE3 1 SE3 C11 C2 C 0 1 Y N N -16.086 -21.529 1.997 -4.504 -0.634 1.900 C11 SE3 2 SE3 C12 C3 C 0 1 N N N -16.458 -18.894 -1.419 -2.151 2.091 -0.480 C12 SE3 3 SE3 C15 C4 C 0 1 Y N N -17.300 -20.785 -3.004 -0.074 0.930 -0.526 C15 SE3 4 SE3 C16 C5 C 0 1 Y N N -17.950 -19.925 -3.920 1.148 0.779 0.111 C16 SE3 5 SE3 C17 C6 C 0 1 Y N N -18.805 -20.504 -4.890 2.237 0.273 -0.593 C17 SE3 6 SE3 C18 C7 C 0 1 Y N N -19.010 -21.885 -4.958 2.093 -0.079 -1.934 C18 SE3 7 SE3 C19 C8 C 0 1 Y N N -18.341 -22.751 -4.031 0.873 0.075 -2.561 C19 SE3 8 SE3 C20 C9 C 0 1 Y N N -17.499 -22.195 -3.067 -0.210 0.572 -1.861 C20 SE3 9 SE3 C21 C10 C 0 1 Y N N -19.529 -19.597 -5.891 3.549 0.109 0.082 C21 SE3 10 SE3 C22 C11 C 0 1 Y N N -20.235 -20.047 -7.072 3.747 0.426 1.377 C22 SE3 11 SE3 C01 C12 C 0 1 N N N -14.462 -17.614 -1.161 -3.114 3.905 0.909 C01 SE3 12 SE3 C02 C13 C 0 1 N N N -15.450 -18.479 -0.356 -3.382 2.546 0.260 C02 SE3 13 SE3 C03 C14 C 0 1 N N N -15.990 -17.422 0.677 -4.549 2.671 -0.721 C03 SE3 14 SE3 C05 C15 C 0 1 Y N N -16.310 -20.418 1.240 -4.024 0.251 0.943 C05 SE3 15 SE3 C06 C16 C 0 1 Y N N -17.657 -19.929 1.173 -3.851 -0.175 -0.368 C06 SE3 16 SE3 C07 C17 C 0 1 Y N N -18.694 -20.537 1.866 -4.155 -1.477 -0.715 C07 SE3 17 SE3 C08 C18 C 0 1 Y N N -18.419 -21.662 2.621 -4.627 -2.358 0.242 C08 SE3 18 SE3 C24 C19 C 0 1 Y N N -20.343 -17.594 -6.842 5.762 -0.461 0.223 C24 SE3 19 SE3 C25 C20 C 0 1 Y N N -19.582 -18.144 -5.740 4.669 -0.390 -0.566 C25 SE3 20 SE3 C26 C21 C 0 1 N N N -20.585 -16.144 -7.028 7.085 -0.948 -0.199 C26 SE3 21 SE3 N04 N1 N 0 1 N N N -15.175 -19.725 0.466 -3.718 1.567 1.297 N04 SE3 22 SE3 N14 N2 N 0 1 N N N -16.361 -20.243 -1.941 -1.172 1.439 0.178 N14 SE3 23 SE3 N27 N3 N 0 1 N N N -20.211 -15.234 -5.999 8.130 -0.974 0.701 N27 SE3 24 SE3 N28 N4 N 0 1 N N N -21.088 -15.803 -8.162 7.269 -1.356 -1.426 N28 SE3 25 SE3 O13 O1 O 0 1 N N N -17.303 -18.096 -1.791 -2.040 2.312 -1.667 O13 SE3 26 SE3 S23 S1 S 0 1 Y N N -20.852 -18.749 -7.810 5.359 0.110 1.836 S23 SE3 27 SE3 CL09 CL1 CL 0 0 N N N -19.779 -22.513 3.502 -5.008 -3.993 -0.199 CL09 SE3 28 SE3 H101 H1 H 0 0 N N N -16.926 -23.037 3.334 -5.178 -2.623 2.291 H101 SE3 29 SE3 H111 H2 H 0 0 N N N -15.086 -21.934 2.050 -4.640 -0.305 2.920 H111 SE3 30 SE3 H161 H3 H 0 0 N N N -17.799 -18.856 -3.881 1.255 1.053 1.150 H161 SE3 31 SE3 H181 H4 H 0 0 N N N -19.670 -22.299 -5.706 2.937 -0.472 -2.483 H181 SE3 32 SE3 H191 H5 H 0 0 N N N -18.487 -23.820 -4.078 0.763 -0.199 -3.600 H191 SE3 33 SE3 H201 H6 H 0 0 N N N -16.994 -22.839 -2.362 -1.163 0.690 -2.356 H201 SE3 34 SE3 H221 H7 H 0 0 N N N -20.332 -21.071 -7.402 2.989 0.827 2.034 H221 SE3 35 SE3 H013 H8 H 0 0 N N N -13.669 -17.245 -0.494 -2.950 4.653 0.133 H013 SE3 36 SE3 H011 H9 H 0 0 N N N -14.014 -18.219 -1.963 -3.971 4.194 1.517 H011 SE3 37 SE3 H012 H10 H 0 0 N N N -14.997 -16.760 -1.601 -2.228 3.838 1.541 H012 SE3 38 SE3 H033 H11 H 0 0 N N N -15.200 -17.182 1.404 -4.802 1.686 -1.113 H033 SE3 39 SE3 H032 H12 H 0 0 N N N -16.288 -16.507 0.144 -5.414 3.089 -0.205 H032 SE3 40 SE3 H031 H13 H 0 0 N N N -16.860 -17.838 1.206 -4.264 3.327 -1.543 H031 SE3 41 SE3 H061 H14 H 0 0 N N N -17.870 -19.062 0.565 -3.479 0.511 -1.114 H061 SE3 42 SE3 H071 H15 H 0 0 N N N -19.697 -20.139 1.817 -4.021 -1.808 -1.735 H071 SE3 43 SE3 H251 H16 H 0 0 N N N -19.129 -17.576 -4.941 4.668 -0.692 -1.603 H251 SE3 44 SE3 H041 H17 H 0 0 N N N -14.800 -20.406 -0.163 -3.728 1.833 2.230 H041 SE3 45 SE3 H141 H18 H 0 0 N N N -15.644 -20.843 -1.585 -1.228 1.321 1.139 H141 SE3 46 SE3 H272 H19 H 0 0 N N N -19.789 -15.575 -5.159 7.994 -0.670 1.613 H272 SE3 47 SE3 H281 H21 H 0 0 N N N -21.190 -14.812 -8.244 8.141 -1.678 -1.704 H281 SE3 48 SE3 H271 H22 H 0 0 N N N -20.371 -14.254 -6.116 9.002 -1.295 0.423 H271 SE3 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SE3 N28 C26 DOUB N N 1 SE3 S23 C22 SING Y N 2 SE3 S23 C24 SING Y N 3 SE3 C22 C21 DOUB Y N 4 SE3 C26 C24 SING N N 5 SE3 C26 N27 SING N N 6 SE3 C24 C25 DOUB Y N 7 SE3 C21 C25 SING Y N 8 SE3 C21 C17 SING N N 9 SE3 C18 C17 DOUB Y N 10 SE3 C18 C19 SING Y N 11 SE3 C17 C16 SING Y N 12 SE3 C19 C20 DOUB Y N 13 SE3 C16 C15 DOUB Y N 14 SE3 C20 C15 SING Y N 15 SE3 C15 N14 SING N N 16 SE3 N14 C12 SING N N 17 SE3 O13 C12 DOUB N N 18 SE3 C12 C02 SING N N 19 SE3 C01 C02 SING N N 20 SE3 C02 N04 SING N N 21 SE3 C02 C03 SING N N 22 SE3 N04 C05 SING N N 23 SE3 C06 C05 DOUB Y N 24 SE3 C06 C07 SING Y N 25 SE3 C05 C11 SING Y N 26 SE3 C07 C08 DOUB Y N 27 SE3 C11 C10 DOUB Y N 28 SE3 C08 C10 SING Y N 29 SE3 C08 CL09 SING N N 30 SE3 C10 H101 SING N N 31 SE3 C11 H111 SING N N 32 SE3 C16 H161 SING N N 33 SE3 C18 H181 SING N N 34 SE3 C19 H191 SING N N 35 SE3 C20 H201 SING N N 36 SE3 C22 H221 SING N N 37 SE3 C01 H013 SING N N 38 SE3 C01 H011 SING N N 39 SE3 C01 H012 SING N N 40 SE3 C03 H033 SING N N 41 SE3 C03 H032 SING N N 42 SE3 C03 H031 SING N N 43 SE3 C06 H061 SING N N 44 SE3 C07 H071 SING N N 45 SE3 C25 H251 SING N N 46 SE3 N04 H041 SING N N 47 SE3 N14 H141 SING N N 48 SE3 N27 H272 SING N N 49 SE3 N28 H281 SING N N 50 SE3 N27 H271 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SE3 InChI InChI 1.06 "InChI=1S/C21H21ClN4OS/c1-21(2,26-16-8-6-15(22)7-9-16)20(27)25-17-5-3-4-13(10-17)14-11-18(19(23)24)28-12-14/h3-12,26H,1-2H3,(H3,23,24)(H,25,27)" SE3 InChIKey InChI 1.06 HSJWVLHTKFAHIV-UHFFFAOYSA-N SE3 SMILES_CANONICAL CACTVS 3.385 "CC(C)(Nc1ccc(Cl)cc1)C(=O)Nc2cccc(c2)c3csc(c3)C(N)=N" SE3 SMILES CACTVS 3.385 "CC(C)(Nc1ccc(Cl)cc1)C(=O)Nc2cccc(c2)c3csc(c3)C(N)=N" SE3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/c1cc(cs1)c2cccc(c2)NC(=O)C(C)(C)Nc3ccc(cc3)Cl)\N" SE3 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(C(=O)Nc1cccc(c1)c2cc(sc2)C(=N)N)Nc3ccc(cc3)Cl" # _pdbx_chem_comp_identifier.comp_id SE3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-2-[(4-chlorophenyl)amino]-2-methyl-propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SE3 "Create component" 2022-12-15 PDBE SE3 "Modify formula" 2023-05-15 PDBE SE3 "Modify atom id" 2023-07-28 PDBE SE3 "Initial release" 2023-08-02 RCSB #