data_SEZ # _chem_comp.id SEZ _chem_comp.name 1,3,5-trimethylbenzene _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H12" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms mesitylene _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-13 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 120.192 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SEZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6ZRD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SEZ C1 C1 C 0 1 N N N N N N -20.632 -7.724 23.589 2.889 0.016 -0.001 C1 SEZ 1 SEZ C2 C2 C 0 1 N N N N N N -25.014 -10.212 23.782 -1.458 2.494 0.001 C2 SEZ 2 SEZ CD C3 C 0 1 N N N N N N -23.339 -7.506 27.714 -1.431 -2.510 0.001 CD SEZ 3 SEZ CE C4 C 0 1 Y N N N N N -23.193 -8.033 26.307 -0.685 -1.201 0.001 CE SEZ 4 SEZ CZ1 C5 C 0 1 Y N N N N N -22.036 -7.705 25.602 0.698 -1.193 -0.000 CZ1 SEZ 5 SEZ CZ2 C6 C 0 1 Y N N N N N -24.153 -8.872 25.734 -1.382 -0.008 -0.003 CZ2 SEZ 6 SEZ CH C7 C 0 1 Y N N N N N -22.839 -8.960 23.713 0.685 1.201 0.003 CH SEZ 7 SEZ CT1 C8 C 0 1 Y N N N N N -21.876 -8.144 24.306 1.382 0.008 0.000 CT1 SEZ 8 SEZ CT2 C9 C 0 1 Y N N N N N -23.980 -9.324 24.426 -0.698 1.193 -0.002 CT2 SEZ 9 SEZ H1 H1 H 0 1 N N N N N N -20.815 -6.777 23.060 3.254 0.016 1.026 H1 SEZ 10 SEZ H2 H2 H 0 1 N N N N N N -19.818 -7.587 24.316 3.257 -0.871 -0.517 H2 SEZ 11 SEZ H3 H3 H 0 1 N N N N N N -24.770 -11.266 23.984 -1.638 2.812 -1.026 H3 SEZ 12 SEZ H4 H4 H 0 1 N N N N N N -26.006 -9.979 24.196 -2.412 2.357 0.511 H4 SEZ 13 SEZ H5 H5 H 0 1 N N N N N N -23.859 -6.537 27.691 -1.610 -2.827 1.029 H5 SEZ 14 SEZ H6 H6 H 0 1 N N N N N N -23.921 -8.220 28.314 -2.385 -2.385 -0.511 H6 SEZ 15 SEZ H7 H7 H 0 1 N N N N N N -21.267 -7.108 26.070 1.243 -2.126 -0.002 H7 SEZ 16 SEZ H8 H8 H 0 1 N N N N N N -25.023 -9.168 26.301 -2.462 -0.014 -0.006 H8 SEZ 17 SEZ H9 H9 H 0 1 N N N N N N -22.701 -9.310 22.701 1.219 2.139 0.004 H9 SEZ 18 SEZ H10 H10 H 0 1 N N N N N N -20.348 -8.500 22.863 3.247 0.909 -0.514 H10 SEZ 19 SEZ H11 H11 H 0 1 N N N N N N -25.020 -10.039 22.696 -0.875 3.255 0.519 H11 SEZ 20 SEZ H12 H12 H 0 1 N N N N N N -22.343 -7.377 28.162 -0.838 -3.266 -0.514 H12 SEZ 21 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SEZ C1 CT1 SING N N 1 SEZ CH CT1 DOUB Y N 2 SEZ CH CT2 SING Y N 3 SEZ C2 CT2 SING N N 4 SEZ CT1 CZ1 SING Y N 5 SEZ CT2 CZ2 DOUB Y N 6 SEZ CZ1 CE DOUB Y N 7 SEZ CZ2 CE SING Y N 8 SEZ CE CD SING N N 9 SEZ C1 H1 SING N N 10 SEZ C1 H2 SING N N 11 SEZ C2 H3 SING N N 12 SEZ C2 H4 SING N N 13 SEZ CD H5 SING N N 14 SEZ CD H6 SING N N 15 SEZ CZ1 H7 SING N N 16 SEZ CZ2 H8 SING N N 17 SEZ CH H9 SING N N 18 SEZ C1 H10 SING N N 19 SEZ C2 H11 SING N N 20 SEZ CD H12 SING N N 21 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SEZ InChI InChI 1.03 "InChI=1S/C9H12/c1-7-4-8(2)6-9(3)5-7/h4-6H,1-3H3" SEZ InChIKey InChI 1.03 AUHZEENZYGFFBQ-UHFFFAOYSA-N SEZ SMILES_CANONICAL CACTVS 3.385 "Cc1cc(C)cc(C)c1" SEZ SMILES CACTVS 3.385 "Cc1cc(C)cc(C)c1" SEZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(cc(c1)C)C" SEZ SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(cc(c1)C)C" # _pdbx_chem_comp_identifier.comp_id SEZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier 1,3,5-trimethylbenzene # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SEZ "Create component" 2020-11-13 PDBE SEZ "Modify synonyms" 2020-11-23 PDBE SEZ "Initial release" 2020-12-02 RCSB SEZ "Modify synonyms" 2021-03-01 PDBE SEZ "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id SEZ _pdbx_chem_comp_synonyms.name mesitylene _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 SEZ CYS None Crosslinker "Amino-acid side chain" "Any position" C1 SG ? ? 2 SEZ CYS None Crosslinker "Amino-acid side chain" "Any position" C2 SG ? ? 3 SEZ CYS None Crosslinker "Amino-acid side chain" "Any position" CD SG ? ? #