data_SJ2 # _chem_comp.id SJ2 _chem_comp.name "~{N}-[(2~{S})-5-carbamimidamido-1-oxidanyl-pentan-2-yl]-~{N}-methyl-ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H20 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-16 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 216.281 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SJ2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7AZ7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SJ2 C1 C1 C 0 1 N N N N N N 2.629 16.228 26.206 2.325 -0.037 -1.657 C1 SJ2 1 SJ2 C2 C2 C 0 1 N N N N N N 3.598 18.231 27.273 2.424 1.612 0.135 C2 SJ2 2 SJ2 C3 C3 C 0 1 N N N N N N 4.151 18.918 28.491 2.840 2.641 -0.885 C3 SJ2 3 SJ2 O4 O1 O 0 1 N N N N N N 3.575 18.856 26.219 2.306 1.926 1.300 O4 SJ2 4 SJ2 O O2 O 0 1 N N N N N N 4.250 14.937 30.251 2.786 -2.477 -0.488 O SJ2 5 SJ2 N N1 N 0 1 N N N N N N 3.164 16.949 27.371 2.182 0.343 -0.249 N SJ2 6 SJ2 CA C4 C 0 1 N N S N N N 3.157 16.266 28.694 1.777 -0.658 0.742 CA SJ2 7 SJ2 C C5 C 0 1 N N N N N N 4.208 15.196 28.920 2.801 -1.794 0.767 C SJ2 8 SJ2 CB C6 C 0 1 N N N N N N 1.749 15.740 28.987 0.403 -1.218 0.370 CB SJ2 9 SJ2 CG C7 C 0 1 N N N N N N 0.867 16.890 29.464 -0.644 -0.106 0.465 CG SJ2 10 SJ2 CD C8 C 0 1 N N N N N N -0.518 16.525 29.775 -2.018 -0.666 0.093 CD SJ2 11 SJ2 NE N2 N 0 1 N N N N N N -1.295 16.477 30.761 -3.020 0.398 0.185 NE SJ2 12 SJ2 CZ C9 C 0 1 N N N N N N -2.132 17.246 31.465 -4.337 0.130 -0.106 CZ SJ2 13 SJ2 NH1 N3 N 0 1 N N N N N N -3.164 16.691 32.158 -5.278 1.129 -0.020 NH1 SJ2 14 SJ2 NH2 N4 N 0 1 N N N N N N -2.039 18.589 31.579 -4.693 -1.072 -0.464 NH2 SJ2 15 SJ2 H1 H1 H 0 1 N N N N N N 2.338 15.211 26.506 3.346 -0.368 -1.842 H1 SJ2 16 SJ2 H2 H2 H 0 1 N N N N N N 1.749 16.762 25.817 1.633 -0.847 -1.886 H2 SJ2 17 SJ2 H3 H3 H 0 1 N N N N N N 3.400 16.173 25.423 2.101 0.822 -2.289 H3 SJ2 18 SJ2 H4 H4 H 0 1 N N N N N N 4.467 19.938 28.226 2.062 2.738 -1.642 H4 SJ2 19 SJ2 H5 H5 H 0 1 N N N N N N 3.375 18.966 29.269 2.989 3.601 -0.391 H5 SJ2 20 SJ2 H6 H6 H 0 1 N N N N N N 5.015 18.353 28.870 3.770 2.327 -1.358 H6 SJ2 21 SJ2 H7 H7 H 0 1 N N N N N N 4.902 14.268 30.423 3.412 -3.212 -0.543 H7 SJ2 22 SJ2 H8 H8 H 0 1 N N N N N N 3.350 17.045 29.446 1.725 -0.193 1.727 H8 SJ2 23 SJ2 H9 H9 H 0 1 N N N N N N 3.939 14.283 28.369 2.549 -2.493 1.565 H9 SJ2 24 SJ2 H10 H10 H 0 1 N N N N N N 5.189 15.556 28.577 3.795 -1.383 0.945 H10 SJ2 25 SJ2 H11 H11 H 0 1 N N N N N N 1.322 15.305 28.071 0.432 -1.603 -0.650 H11 SJ2 26 SJ2 H12 H12 H 0 1 N N N N N N 1.801 14.969 29.769 0.141 -2.024 1.055 H12 SJ2 27 SJ2 H13 H13 H 0 1 N N N N N N 1.320 17.312 30.373 -0.673 0.279 1.485 H13 SJ2 28 SJ2 H14 H14 H 0 1 N N N N N N 0.848 17.655 28.674 -0.382 0.700 -0.220 H14 SJ2 29 SJ2 H15 H15 H 0 1 N N N N N N -1.077 17.176 29.086 -1.989 -1.051 -0.927 H15 SJ2 30 SJ2 H16 H16 H 0 1 N N N N N N -0.558 15.487 29.413 -2.280 -1.472 0.778 H16 SJ2 31 SJ2 H17 H17 H 0 1 N N N N N N -1.284 15.555 31.149 -2.755 1.293 0.451 H17 SJ2 32 SJ2 H18 H18 H 0 1 N N N N N N -3.777 17.272 32.694 -5.012 2.023 0.246 H18 SJ2 33 SJ2 H19 H19 H 0 1 N N N N N N -3.310 15.702 32.131 -6.207 0.939 -0.225 H19 SJ2 34 SJ2 H20 H20 H 0 1 N N N N N N -2.756 18.966 32.165 -5.622 -1.262 -0.669 H20 SJ2 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SJ2 C1 N SING N N 1 SJ2 O4 C2 DOUB N N 2 SJ2 C2 N SING N N 3 SJ2 C2 C3 SING N N 4 SJ2 N CA SING N N 5 SJ2 CA C SING N N 6 SJ2 CA CB SING N N 7 SJ2 C O SING N N 8 SJ2 CB CG SING N N 9 SJ2 CG CD SING N N 10 SJ2 CD NE SING N N 11 SJ2 NE CZ SING N N 12 SJ2 CZ NH2 DOUB N N 13 SJ2 CZ NH1 SING N N 14 SJ2 C1 H1 SING N N 15 SJ2 C1 H2 SING N N 16 SJ2 C1 H3 SING N N 17 SJ2 C3 H4 SING N N 18 SJ2 C3 H5 SING N N 19 SJ2 C3 H6 SING N N 20 SJ2 O H7 SING N N 21 SJ2 CA H8 SING N N 22 SJ2 C H9 SING N N 23 SJ2 C H10 SING N N 24 SJ2 CB H11 SING N N 25 SJ2 CB H12 SING N N 26 SJ2 CG H13 SING N N 27 SJ2 CG H14 SING N N 28 SJ2 CD H15 SING N N 29 SJ2 CD H16 SING N N 30 SJ2 NE H17 SING N N 31 SJ2 NH1 H18 SING N N 32 SJ2 NH1 H19 SING N N 33 SJ2 NH2 H20 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SJ2 InChI InChI 1.03 "InChI=1S/C9H20N4O2/c1-7(15)13(2)8(6-14)4-3-5-12-9(10)11/h8,14H,3-6H2,1-2H3,(H4,10,11,12)/t8-/m0/s1" SJ2 InChIKey InChI 1.03 FVJAWAIBRGBBJT-QMMMGPOBSA-N SJ2 SMILES_CANONICAL CACTVS 3.385 "CN([C@H](CO)CCCNC(N)=N)C(C)=O" SJ2 SMILES CACTVS 3.385 "CN([CH](CO)CCCNC(N)=N)C(C)=O" SJ2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NCCC[C@@H](CO)N(C)C(=O)C" SJ2 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)N(C)C(CCCNC(=N)N)CO" # _pdbx_chem_comp_identifier.comp_id SJ2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{S})-5-carbamimidamido-1-oxidanyl-pentan-2-yl]-~{N}-methyl-ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SJ2 "Create component" 2020-11-16 PDBE SJ2 "Initial release" 2021-12-01 RCSB SJ2 "Modify PCM" 2024-09-27 PDBE #