data_SJ9 # _chem_comp.id SJ9 _chem_comp.name "5-(benzylcarbamoyl)-1-[(4-chloro-3-fluorophenyl)methyl]-1H-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H18 Cl F N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-07-05 _chem_comp.pdbx_modified_date 2023-06-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 436.863 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SJ9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8DK4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SJ9 C1 C1 C 0 1 Y N N -20.342 -21.349 13.805 6.581 -0.537 -0.285 C1 SJ9 1 SJ9 C2 C2 C 0 1 Y N N -19.061 -21.822 14.031 6.651 -1.796 -0.852 C2 SJ9 2 SJ9 C4 C3 C 0 1 N N N -20.752 -19.998 14.365 5.774 0.546 -0.953 C4 SJ9 3 SJ9 C5 C4 C 0 1 Y N N -20.848 -23.340 12.558 7.981 -1.270 1.514 C5 SJ9 4 SJ9 C6 C5 C 0 1 Y N N -19.565 -23.829 12.771 8.060 -2.525 0.941 C6 SJ9 5 SJ9 C9 C6 C 0 1 N N N -23.041 -19.307 13.541 3.491 1.395 -0.910 C9 SJ9 6 SJ9 C10 C7 C 0 1 Y N N -23.814 -18.831 12.330 2.104 1.360 -0.404 C10 SJ9 7 SJ9 C11 C8 C 0 1 Y N N -25.009 -19.461 11.986 1.733 0.406 0.555 C11 SJ9 8 SJ9 C12 C9 C 0 1 Y N N -23.248 -17.835 11.502 1.171 2.276 -0.875 C12 SJ9 9 SJ9 C13 C10 C 0 1 Y N N -23.920 -17.437 10.313 -0.139 2.234 -0.389 C13 SJ9 10 SJ9 C14 C11 C 0 1 Y N N -25.127 -18.035 9.994 -0.498 1.265 0.572 C14 SJ9 11 SJ9 C15 C12 C 0 1 Y N N -26.679 -21.425 5.959 -4.378 -2.660 -0.207 C15 SJ9 12 SJ9 C16 C13 C 0 1 Y N N -25.683 -19.049 10.824 0.458 0.361 1.033 C16 SJ9 13 SJ9 C17 C14 C 0 1 Y N N -23.663 -16.468 9.276 -1.299 3.003 -0.655 C17 SJ9 14 SJ9 C18 C15 C 0 1 Y N N -24.734 -16.588 8.394 -2.305 2.510 0.116 C18 SJ9 15 SJ9 C19 C16 C 0 1 N N N -26.828 -17.867 8.243 -2.607 0.660 1.818 C19 SJ9 16 SJ9 C20 C17 C 0 1 Y N N -26.741 -19.120 7.415 -3.233 -0.510 1.104 C20 SJ9 17 SJ9 C21 C18 C 0 1 Y N N -25.648 -19.381 6.609 -4.485 -0.383 0.535 C21 SJ9 18 SJ9 C22 C19 C 0 1 Y N N -27.788 -20.037 7.497 -2.552 -1.711 1.018 C22 SJ9 19 SJ9 C23 C20 C 0 1 Y N N -25.640 -20.549 5.881 -5.060 -1.457 -0.122 C23 SJ9 20 SJ9 C24 C21 C 0 1 N N N -24.930 -15.781 7.135 -3.682 3.021 0.147 C24 SJ9 21 SJ9 C3 C22 C 0 1 Y N N -21.241 -22.110 13.069 7.246 -0.274 0.898 C3 SJ9 22 SJ9 C7 C23 C 0 1 Y N N -18.679 -23.059 13.512 7.390 -2.790 -0.239 C7 SJ9 23 SJ9 C8 C24 C 0 1 Y N N -27.773 -21.194 6.776 -3.124 -2.785 0.363 C8 SJ9 24 SJ9 F F1 F 0 1 N N N -24.627 -20.840 5.096 -6.285 -1.334 -0.679 F SJ9 25 SJ9 N1 N1 N 0 1 N N N -21.585 -19.260 13.421 4.398 0.512 -0.451 N1 SJ9 26 SJ9 N2 N2 N 0 1 Y N N -25.573 -17.493 8.863 -1.825 1.452 0.865 N2 SJ9 27 SJ9 O1 O1 O 0 1 N N N -23.609 -19.774 14.504 3.813 2.222 -1.742 O1 SJ9 28 SJ9 O2 O2 O 0 1 N N N -24.209 -14.605 6.958 -4.595 2.447 0.956 O2 SJ9 29 SJ9 O3 O3 O 0 1 N N N -25.679 -16.129 6.281 -3.997 3.961 -0.557 O3 SJ9 30 SJ9 CL CL1 CL 0 0 N N N -26.629 -22.864 5.005 -5.100 -4.012 -1.023 CL SJ9 31 SJ9 H1 H1 H 0 1 N N N -18.360 -21.236 14.607 6.127 -2.003 -1.774 H1 SJ9 32 SJ9 H2 H2 H 0 1 N N N -19.847 -19.410 14.579 6.217 1.517 -0.733 H2 SJ9 33 SJ9 H3 H3 H 0 1 N N N -21.317 -20.153 15.296 5.771 0.385 -2.032 H3 SJ9 34 SJ9 H4 H4 H 0 1 N N N -21.551 -23.926 11.985 8.504 -1.063 2.436 H4 SJ9 35 SJ9 H5 H5 H 0 1 N N N -19.264 -24.785 12.370 8.634 -3.303 1.422 H5 SJ9 36 SJ9 H6 H6 H 0 1 N N N -25.410 -20.252 12.602 2.466 -0.299 0.919 H6 SJ9 37 SJ9 H7 H7 H 0 1 N N N -22.308 -17.377 11.771 1.455 3.014 -1.610 H7 SJ9 38 SJ9 H8 H8 H 0 1 N N N -26.626 -19.503 10.560 0.185 -0.382 1.768 H8 SJ9 39 SJ9 H9 H9 H 0 1 N N N -22.822 -15.795 9.200 -1.371 3.830 -1.344 H9 SJ9 40 SJ9 H10 H10 H 0 1 N N N -27.154 -17.042 7.592 -3.390 1.282 2.251 H10 SJ9 41 SJ9 H11 H11 H 0 1 N N N -27.574 -18.025 9.036 -1.953 0.295 2.610 H11 SJ9 42 SJ9 H12 H12 H 0 1 N N N -24.823 -18.687 6.552 -5.016 0.555 0.603 H12 SJ9 43 SJ9 H13 H13 H 0 1 N N N -28.627 -19.827 8.144 -1.573 -1.809 1.463 H13 SJ9 44 SJ9 H14 H14 H 0 1 N N N -22.243 -21.746 12.895 7.191 0.709 1.340 H14 SJ9 45 SJ9 H15 H15 H 0 1 N N N -17.678 -23.424 13.689 7.452 -3.771 -0.686 H15 SJ9 46 SJ9 H16 H16 H 0 1 N N N -28.584 -21.904 6.840 -2.592 -3.723 0.297 H16 SJ9 47 SJ9 H17 H17 H 0 1 N N N -21.160 -18.723 12.693 4.141 -0.148 0.212 H17 SJ9 48 SJ9 H18 H18 H 0 1 N N N -24.433 -14.219 6.120 -5.488 2.818 0.942 H18 SJ9 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SJ9 CL C15 SING N N 1 SJ9 F C23 SING N N 2 SJ9 C23 C15 DOUB Y N 3 SJ9 C23 C21 SING Y N 4 SJ9 C15 C8 SING Y N 5 SJ9 O3 C24 DOUB N N 6 SJ9 C21 C20 DOUB Y N 7 SJ9 C8 C22 DOUB Y N 8 SJ9 O2 C24 SING N N 9 SJ9 C24 C18 SING N N 10 SJ9 C20 C22 SING Y N 11 SJ9 C20 C19 SING N N 12 SJ9 C19 N2 SING N N 13 SJ9 C18 N2 SING Y N 14 SJ9 C18 C17 DOUB Y N 15 SJ9 N2 C14 SING Y N 16 SJ9 C17 C13 SING Y N 17 SJ9 C14 C13 DOUB Y N 18 SJ9 C14 C16 SING Y N 19 SJ9 C13 C12 SING Y N 20 SJ9 C16 C11 DOUB Y N 21 SJ9 C12 C10 DOUB Y N 22 SJ9 C11 C10 SING Y N 23 SJ9 C10 C9 SING N N 24 SJ9 C5 C6 DOUB Y N 25 SJ9 C5 C3 SING Y N 26 SJ9 C6 C7 SING Y N 27 SJ9 C3 C1 DOUB Y N 28 SJ9 N1 C9 SING N N 29 SJ9 N1 C4 SING N N 30 SJ9 C7 C2 DOUB Y N 31 SJ9 C9 O1 DOUB N N 32 SJ9 C1 C2 SING Y N 33 SJ9 C1 C4 SING N N 34 SJ9 C2 H1 SING N N 35 SJ9 C4 H2 SING N N 36 SJ9 C4 H3 SING N N 37 SJ9 C5 H4 SING N N 38 SJ9 C6 H5 SING N N 39 SJ9 C11 H6 SING N N 40 SJ9 C12 H7 SING N N 41 SJ9 C16 H8 SING N N 42 SJ9 C17 H9 SING N N 43 SJ9 C19 H10 SING N N 44 SJ9 C19 H11 SING N N 45 SJ9 C21 H12 SING N N 46 SJ9 C22 H13 SING N N 47 SJ9 C3 H14 SING N N 48 SJ9 C7 H15 SING N N 49 SJ9 C8 H16 SING N N 50 SJ9 N1 H17 SING N N 51 SJ9 O2 H18 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SJ9 SMILES ACDLabs 12.01 "O=C(O)c1cc2cc(ccc2n1Cc1ccc(Cl)c(F)c1)C(=O)NCc1ccccc1" SJ9 InChI InChI 1.06 "InChI=1S/C24H18ClFN2O3/c25-19-8-6-16(10-20(19)26)14-28-21-9-7-17(11-18(21)12-22(28)24(30)31)23(29)27-13-15-4-2-1-3-5-15/h1-12H,13-14H2,(H,27,29)(H,30,31)" SJ9 InChIKey InChI 1.06 QNQATVBNODOSPT-UHFFFAOYSA-N SJ9 SMILES_CANONICAL CACTVS 3.385 "OC(=O)c1cc2cc(ccc2n1Cc3ccc(Cl)c(F)c3)C(=O)NCc4ccccc4" SJ9 SMILES CACTVS 3.385 "OC(=O)c1cc2cc(ccc2n1Cc3ccc(Cl)c(F)c3)C(=O)NCc4ccccc4" SJ9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CNC(=O)c2ccc3c(c2)cc(n3Cc4ccc(c(c4)F)Cl)C(=O)O" SJ9 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CNC(=O)c2ccc3c(c2)cc(n3Cc4ccc(c(c4)F)Cl)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SJ9 "SYSTEMATIC NAME" ACDLabs 12.01 "5-(benzylcarbamoyl)-1-[(4-chloro-3-fluorophenyl)methyl]-1H-indole-2-carboxylic acid" SJ9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(4-chloranyl-3-fluoranyl-phenyl)methyl]-5-[(phenylmethyl)carbamoyl]indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SJ9 "Create component" 2022-07-05 RCSB SJ9 "Initial release" 2023-07-05 RCSB #