data_SJA # _chem_comp.id SJA _chem_comp.name Amorphadiene _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H24" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(1~{R},4~{R},4~{a}~{S},8~{a}~{R})-4,7-dimethyl-1-prop-1-en-2-yl-1,2,3,4,4~{a},5,6,8~{a}-octahydronaphthalene" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-03-09 _chem_comp.pdbx_modified_date 2021-05-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 204.351 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SJA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6W30 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SJA C10 C1 C 0 1 N N N 36.860 -36.516 20.896 0.993 1.835 0.282 C10 SJA 1 SJA C13 C2 C 0 1 N N N 33.577 -33.029 20.410 -2.681 -0.069 -0.115 C13 SJA 2 SJA C15 C3 C 0 1 N N N 32.209 -32.309 20.505 -3.510 0.296 -1.319 C15 SJA 3 SJA C01 C4 C 0 1 N N N 33.771 -38.286 17.871 2.734 -2.025 0.207 C01 SJA 4 SJA C02 C5 C 0 1 N N R 34.085 -37.423 19.083 1.423 -1.253 0.370 C02 SJA 5 SJA C03 C6 C 0 1 N N N 32.751 -36.936 19.744 0.336 -2.199 0.880 C03 SJA 6 SJA C04 C7 C 0 1 N N N 32.796 -35.502 20.560 -0.967 -1.417 1.063 C04 SJA 7 SJA C05 C8 C 0 1 N N R 33.675 -34.449 19.805 -1.401 -0.846 -0.288 C05 SJA 8 SJA C06 C9 C 0 1 N N R 35.107 -35.023 19.662 -0.320 0.077 -0.837 C06 SJA 9 SJA C07 C10 C 0 1 N N S 35.042 -36.298 18.596 1.008 -0.663 -0.981 C07 SJA 10 SJA C08 C11 C 0 1 N N N 36.266 -36.886 18.397 2.075 0.352 -1.399 C08 SJA 11 SJA C09 C12 C 0 1 N N N 36.884 -37.494 19.816 2.304 1.321 -0.237 C09 SJA 12 SJA C11 C13 C 0 1 N N N 35.645 -35.473 20.943 -0.154 1.288 0.028 C11 SJA 13 SJA C12 C14 C 0 1 N N N 37.808 -36.679 22.113 1.013 3.060 1.161 C12 SJA 14 SJA C14 C15 C 0 1 N N N 34.649 -32.369 20.837 -3.073 0.289 1.083 C14 SJA 15 SJA H2 H2 H 0 1 N N N 32.347 -31.317 20.961 -3.250 1.302 -1.648 H2 SJA 16 SJA H3 H3 H 0 1 N N N 31.785 -32.193 19.497 -3.312 -0.412 -2.125 H3 SJA 17 SJA H4 H4 H 0 1 N N N 31.523 -32.905 21.125 -4.567 0.261 -1.057 H4 SJA 18 SJA H5 H5 H 0 1 N N N 33.093 -39.101 18.166 2.592 -2.835 -0.509 H5 SJA 19 SJA H6 H6 H 0 1 N N N 33.289 -37.670 17.097 3.510 -1.351 -0.157 H6 SJA 20 SJA H7 H7 H 0 1 N N N 34.704 -38.711 17.472 3.034 -2.439 1.169 H7 SJA 21 SJA H8 H8 H 0 1 N N N 34.625 -38.037 19.819 1.566 -0.445 1.089 H8 SJA 22 SJA H9 H9 H 0 1 N N N 32.001 -36.839 18.945 0.182 -3.000 0.157 H9 SJA 23 SJA H10 H10 H 0 1 N N N 32.431 -37.712 20.455 0.643 -2.624 1.836 H10 SJA 24 SJA H11 H11 H 0 1 N N N 31.772 -35.112 20.657 -1.742 -2.083 1.443 H11 SJA 25 SJA H12 H12 H 0 1 N N N 33.220 -35.672 21.561 -0.807 -0.603 1.770 H12 SJA 26 SJA H13 H13 H 0 1 N N N 33.265 -34.381 18.786 -1.566 -1.663 -0.990 H13 SJA 27 SJA H14 H14 H 0 1 N N N 35.760 -34.254 19.224 -0.625 0.406 -1.830 H14 SJA 28 SJA H15 H15 H 0 1 N N N 34.647 -35.901 17.649 0.916 -1.457 -1.723 H15 SJA 29 SJA H16 H16 H 0 1 N N N 36.155 -37.707 17.674 3.003 -0.166 -1.638 H16 SJA 30 SJA H17 H17 H 0 1 N N N 36.963 -36.135 17.996 1.730 0.910 -2.271 H17 SJA 31 SJA H18 H18 H 0 1 N N N 36.286 -38.367 20.116 2.909 2.160 -0.582 H18 SJA 32 SJA H19 H19 H 0 1 N N N 37.925 -37.805 19.644 2.832 0.805 0.564 H19 SJA 33 SJA H20 H20 H 0 1 N N N 35.242 -35.118 21.880 -1.038 1.730 0.463 H20 SJA 34 SJA H22 H22 H 0 1 N N N 37.646 -35.850 22.818 -0.005 3.307 1.462 H22 SJA 35 SJA H23 H23 H 0 1 N N N 37.598 -37.635 22.616 1.616 2.862 2.047 H23 SJA 36 SJA H24 H24 H 0 1 N N N 38.852 -36.668 21.768 1.442 3.896 0.609 H24 SJA 37 SJA H25 H25 H 0 1 N N N 34.546 -31.369 21.232 -3.990 0.845 1.207 H25 SJA 38 SJA H26 H26 H 0 1 N N N 35.623 -32.833 20.789 -2.479 0.027 1.946 H26 SJA 39 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SJA C01 C02 SING N N 1 SJA C08 C07 SING N N 2 SJA C08 C09 SING N N 3 SJA C07 C02 SING N N 4 SJA C07 C06 SING N N 5 SJA C02 C03 SING N N 6 SJA C06 C05 SING N N 7 SJA C06 C11 SING N N 8 SJA C03 C04 SING N N 9 SJA C05 C13 SING N N 10 SJA C05 C04 SING N N 11 SJA C09 C10 SING N N 12 SJA C13 C15 SING N N 13 SJA C13 C14 DOUB N N 14 SJA C10 C11 DOUB N N 15 SJA C10 C12 SING N N 16 SJA C15 H2 SING N N 17 SJA C15 H3 SING N N 18 SJA C15 H4 SING N N 19 SJA C01 H5 SING N N 20 SJA C01 H6 SING N N 21 SJA C01 H7 SING N N 22 SJA C02 H8 SING N N 23 SJA C03 H9 SING N N 24 SJA C03 H10 SING N N 25 SJA C04 H11 SING N N 26 SJA C04 H12 SING N N 27 SJA C05 H13 SING N N 28 SJA C06 H14 SING N N 29 SJA C07 H15 SING N N 30 SJA C08 H16 SING N N 31 SJA C08 H17 SING N N 32 SJA C09 H18 SING N N 33 SJA C09 H19 SING N N 34 SJA C11 H20 SING N N 35 SJA C12 H22 SING N N 36 SJA C12 H23 SING N N 37 SJA C12 H24 SING N N 38 SJA C14 H25 SING N N 39 SJA C14 H26 SING N N 40 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SJA InChI InChI 1.03 "InChI=1S/C15H24/c1-10(2)13-8-6-12(4)14-7-5-11(3)9-15(13)14/h9,12-15H,1,5-8H2,2-4H3/t12-,13+,14+,15-/m1/s1" SJA InChIKey InChI 1.03 HMTAHNDPLDKYJT-CBBWQLFWSA-N SJA SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1CC[C@H]([C@H]2C=C(C)CC[C@@H]12)C(C)=C" SJA SMILES CACTVS 3.385 "C[CH]1CC[CH]([CH]2C=C(C)CC[CH]12)C(C)=C" SJA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H]1CC[C@H]([C@@H]2[C@H]1CCC(=C2)C)C(=C)C" SJA SMILES "OpenEye OEToolkits" 2.0.7 "CC1CCC(C2C1CCC(=C2)C)C(=C)C" # _pdbx_chem_comp_identifier.comp_id SJA _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R},4~{R},4~{a}~{S},8~{a}~{R})-4,7-dimethyl-1-prop-1-en-2-yl-1,2,3,4,4~{a},5,6,8~{a}-octahydronaphthalene" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id SJA _pdbx_chem_comp_synonyms.name "(1~{R},4~{R},4~{a}~{S},8~{a}~{R})-4,7-dimethyl-1-prop-1-en-2-yl-1,2,3,4,4~{a},5,6,8~{a}-octahydronaphthalene" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SJA "Create component" 2020-03-09 RCSB SJA "Modify synonyms" 2021-03-13 RCSB SJA "Initial release" 2021-05-26 RCSB ##