data_SJX # _chem_comp.id SJX _chem_comp.name "8-(4-azanylbutyl)-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H25 Cl N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-12-15 _chem_comp.pdbx_modified_date 2023-05-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 448.948 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SJX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8BZJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SJX N N1 N 0 1 N N N 30.229 -13.640 22.724 6.259 -2.260 0.292 N SJX 1 SJX C C1 C 0 1 N N N 30.105 -15.077 22.827 6.878 -3.477 0.823 C SJX 2 SJX O O1 O 0 1 N N N 28.742 -13.693 16.043 0.678 1.617 -0.887 O SJX 3 SJX C1 C2 C 0 1 Y N N 30.189 -12.973 21.564 4.892 -2.087 0.377 C1 SJX 4 SJX C10 C3 C 0 1 Y N N 28.065 -9.217 11.805 -5.370 0.462 0.490 C10 SJX 5 SJX C11 C4 C 0 1 Y N N 28.186 -7.854 11.553 -5.873 1.355 1.434 C11 SJX 6 SJX C12 C5 C 0 1 Y N N 27.943 -7.391 10.273 -7.240 1.559 1.505 C12 SJX 7 SJX C13 C6 C 0 1 Y N N 27.589 -8.288 9.284 -8.060 0.862 0.629 C13 SJX 8 SJX C14 C7 C 0 1 Y N N 27.479 -9.642 9.604 -7.493 -0.009 -0.283 C14 SJX 9 SJX C15 C8 C 0 1 N N N 27.137 -10.667 8.564 -8.380 -0.767 -1.237 C15 SJX 10 SJX C16 C9 C 0 1 Y N N 29.736 -9.972 13.509 -3.398 -0.659 -0.543 C16 SJX 11 SJX C17 C10 C 0 1 Y N N 30.048 -10.478 14.758 -2.039 -0.873 -0.625 C17 SJX 12 SJX C18 C11 C 0 1 N N N 29.073 -13.010 17.003 1.158 0.584 -0.455 C18 SJX 13 SJX C19 C12 C 0 1 N N N 28.891 -15.041 18.311 3.343 1.398 -1.143 C19 SJX 14 SJX C2 C13 C 0 1 Y N N 30.460 -11.003 20.457 2.850 -2.922 1.054 C2 SJX 15 SJX C20 C14 C 0 1 N N N 27.487 -15.284 18.822 3.817 2.375 -0.065 C20 SJX 16 SJX C21 C15 C 0 1 N N N 26.406 -14.741 17.898 4.712 3.441 -0.700 C21 SJX 17 SJX C22 C16 C 0 1 N N N 25.021 -15.004 18.447 5.185 4.417 0.379 C22 SJX 18 SJX C23 C17 C 0 1 Y N N 29.661 -12.949 19.363 3.047 -0.771 -0.037 C23 SJX 19 SJX C3 C18 C 0 1 Y N N 29.992 -11.582 19.274 2.236 -1.765 0.552 C3 SJX 20 SJX C4 C19 C 0 1 N N N 29.812 -10.925 18.016 0.838 -1.581 0.642 C4 SJX 21 SJX C5 C20 C 0 1 N N N 29.354 -11.577 16.925 0.287 -0.427 0.150 C5 SJX 22 SJX C6 C21 C 0 1 Y N N 29.053 -10.873 15.651 -1.173 -0.199 0.239 C6 SJX 23 SJX C7 C22 C 0 1 Y N N 27.724 -10.696 15.270 -1.685 0.690 1.186 C7 SJX 24 SJX C8 C23 C 0 1 Y N N 27.409 -10.171 14.030 -3.043 0.902 1.268 C8 SJX 25 SJX C9 C24 C 0 1 Y N N 28.404 -9.802 13.129 -3.908 0.233 0.401 C9 SJX 26 SJX N1 N2 N 0 1 Y N N 30.568 -11.684 21.600 4.161 -3.039 0.947 N1 SJX 27 SJX N2 N3 N 0 1 Y N N 27.702 -10.101 10.850 -6.189 -0.188 -0.327 N2 SJX 28 SJX N3 N4 N 0 1 N N N 29.216 -13.615 18.236 2.486 0.377 -0.535 N3 SJX 29 SJX N4 N5 N 0 1 N N N 23.971 -14.590 17.512 6.045 5.441 -0.231 N4 SJX 30 SJX N5 N6 N 0 1 Y N N 29.748 -13.655 20.494 4.358 -0.976 -0.106 N5 SJX 31 SJX CL CL1 CL 0 0 N N N 31.722 -10.529 15.227 -1.404 -1.979 -1.803 CL SJX 32 SJX H1 H1 H 0 1 N N N 31.110 -13.412 23.139 6.810 -1.574 -0.117 H1 SJX 33 SJX H2 H2 H 0 1 N N N 30.170 -15.376 23.883 6.473 -4.347 0.306 H2 SJX 34 SJX H3 H3 H 0 1 N N N 29.134 -15.392 22.416 7.956 -3.432 0.670 H3 SJX 35 SJX H4 H4 H 0 1 N N N 30.916 -15.557 22.260 6.665 -3.557 1.889 H4 SJX 36 SJX H5 H5 H 0 1 N N N 28.464 -7.171 12.342 -5.206 1.881 2.101 H5 SJX 37 SJX H6 H6 H 0 1 N N N 28.029 -6.338 10.049 -7.659 2.244 2.227 H6 SJX 38 SJX H7 H7 H 0 1 N N N 27.400 -7.946 8.277 -9.131 1.002 0.656 H7 SJX 39 SJX H8 H8 H 0 1 N N N 27.127 -11.667 9.023 -8.515 -0.185 -2.148 H8 SJX 40 SJX H9 H9 H 0 1 N N N 26.144 -10.446 8.145 -7.917 -1.723 -1.482 H9 SJX 41 SJX H10 H10 H 0 1 N N N 27.889 -10.640 7.761 -9.349 -0.942 -0.770 H10 SJX 42 SJX H11 H11 H 0 1 N N N 30.528 -9.707 12.824 -4.068 -1.180 -1.210 H11 SJX 43 SJX H12 H12 H 0 1 N N N 28.982 -15.478 17.306 2.780 1.941 -1.903 H12 SJX 44 SJX H13 H13 H 0 1 N N N 29.604 -15.531 18.990 4.207 0.919 -1.605 H13 SJX 45 SJX H14 H14 H 0 1 N N N 30.746 -9.962 20.446 2.263 -3.701 1.519 H14 SJX 46 SJX H15 H15 H 0 1 N N N 27.384 -14.798 19.803 2.953 2.853 0.396 H15 SJX 47 SJX H16 H16 H 0 1 N N N 27.339 -16.368 18.933 4.380 1.832 0.694 H16 SJX 48 SJX H17 H17 H 0 1 N N N 26.499 -15.227 16.916 5.576 2.962 -1.161 H17 SJX 49 SJX H18 H18 H 0 1 N N N 26.545 -13.656 17.785 4.148 3.983 -1.459 H18 SJX 50 SJX H19 H19 H 0 1 N N N 24.900 -14.445 19.387 4.322 4.896 0.840 H19 SJX 51 SJX H20 H20 H 0 1 N N N 24.916 -16.081 18.644 5.749 3.875 1.138 H20 SJX 52 SJX H21 H21 H 0 1 N N N 30.050 -9.875 17.936 0.213 -2.338 1.092 H21 SJX 53 SJX H22 H22 H 0 1 N N N 26.932 -10.972 15.950 -1.016 1.212 1.854 H22 SJX 54 SJX H23 H23 H 0 1 N N N 26.372 -10.045 13.756 -3.439 1.589 2.000 H23 SJX 55 SJX H24 H24 H 0 1 N N N 23.074 -14.780 17.912 5.566 5.915 -0.983 H24 SJX 56 SJX H25 H25 H 0 1 N N N 24.054 -13.610 17.331 6.371 6.099 0.461 H25 SJX 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SJX C15 C14 SING N N 1 SJX C13 C14 DOUB Y N 2 SJX C13 C12 SING Y N 3 SJX C14 N2 SING Y N 4 SJX C12 C11 DOUB Y N 5 SJX N2 C10 DOUB Y N 6 SJX C11 C10 SING Y N 7 SJX C10 C9 SING N N 8 SJX C9 C16 DOUB Y N 9 SJX C9 C8 SING Y N 10 SJX C16 C17 SING Y N 11 SJX C8 C7 DOUB Y N 12 SJX C17 CL SING N N 13 SJX C17 C6 DOUB Y N 14 SJX C7 C6 SING Y N 15 SJX C6 C5 SING N N 16 SJX O C18 DOUB N N 17 SJX C5 C18 SING N N 18 SJX C5 C4 DOUB N N 19 SJX C18 N3 SING N N 20 SJX N4 C22 SING N N 21 SJX C21 C22 SING N N 22 SJX C21 C20 SING N N 23 SJX C4 C3 SING N N 24 SJX N3 C19 SING N N 25 SJX N3 C23 SING N N 26 SJX C19 C20 SING N N 27 SJX C3 C23 DOUB Y N 28 SJX C3 C2 SING Y N 29 SJX C23 N5 SING Y N 30 SJX C2 N1 DOUB Y N 31 SJX N5 C1 DOUB Y N 32 SJX C1 N1 SING Y N 33 SJX C1 N SING N N 34 SJX N C SING N N 35 SJX N H1 SING N N 36 SJX C H2 SING N N 37 SJX C H3 SING N N 38 SJX C H4 SING N N 39 SJX C11 H5 SING N N 40 SJX C12 H6 SING N N 41 SJX C13 H7 SING N N 42 SJX C15 H8 SING N N 43 SJX C15 H9 SING N N 44 SJX C15 H10 SING N N 45 SJX C16 H11 SING N N 46 SJX C19 H12 SING N N 47 SJX C19 H13 SING N N 48 SJX C2 H14 SING N N 49 SJX C20 H15 SING N N 50 SJX C20 H16 SING N N 51 SJX C21 H17 SING N N 52 SJX C21 H18 SING N N 53 SJX C22 H19 SING N N 54 SJX C22 H20 SING N N 55 SJX C4 H21 SING N N 56 SJX C7 H22 SING N N 57 SJX C8 H23 SING N N 58 SJX N4 H24 SING N N 59 SJX N4 H25 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SJX InChI InChI 1.06 "InChI=1S/C24H25ClN6O/c1-15-6-5-7-21(29-15)16-8-9-18(20(25)13-16)19-12-17-14-28-24(27-2)30-22(17)31(23(19)32)11-4-3-10-26/h5-9,12-14H,3-4,10-11,26H2,1-2H3,(H,27,28,30)" SJX InChIKey InChI 1.06 YASIXTGDNNJPQS-UHFFFAOYSA-N SJX SMILES_CANONICAL CACTVS 3.385 "CNc1ncc2C=C(C(=O)N(CCCCN)c2n1)c3ccc(cc3Cl)c4cccc(C)n4" SJX SMILES CACTVS 3.385 "CNc1ncc2C=C(C(=O)N(CCCCN)c2n1)c3ccc(cc3Cl)c4cccc(C)n4" SJX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cccc(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CCCCN)NC" SJX SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cccc(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CCCCN)NC" # _pdbx_chem_comp_identifier.comp_id SJX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "8-(4-azanylbutyl)-6-[2-chloranyl-4-(6-methylpyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SJX "Create component" 2022-12-15 PDBE SJX "Initial release" 2023-01-18 RCSB SJX "Modify formula" 2023-05-15 PDBE #