data_SKK # _chem_comp.id SKK _chem_comp.name "N-[2-({2-[(2S)-2-cyanopyrrolidin-1-yl]-2-oxoethyl}amino)-2-methylpropyl]-2-methylpyrazolo[1,5-a]pyrimidine-6-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H25 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Anagliptin _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2014-02-07 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 383.448 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SKK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3WQH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SKK N1 N1 N 0 1 N N N 50.263 49.942 36.765 4.063 3.967 0.074 N1 SKK 1 SKK N2 N2 N 0 1 N N N 47.145 50.535 37.977 4.913 0.673 0.111 N2 SKK 2 SKK N3 N3 N 0 1 N N N 45.391 52.079 35.078 1.862 -1.399 0.325 N3 SKK 3 SKK N4 N4 N 0 1 N N N 45.189 51.221 31.466 -0.952 -1.813 -0.012 N4 SKK 4 SKK N5 N5 N 0 1 Y N N 43.868 49.632 27.096 -3.490 1.385 -0.894 N5 SKK 5 SKK N6 N6 N 0 1 Y N N 45.680 48.606 28.300 -5.269 0.289 0.204 N6 SKK 6 SKK N7 N7 N 0 1 Y N N 46.634 47.623 28.130 -6.618 0.549 0.474 N7 SKK 7 SKK O8 O8 O 0 1 N N N 47.721 52.253 36.620 3.016 0.767 1.257 O8 SKK 8 SKK O9 O9 O 0 1 N N N 43.188 51.869 30.605 -2.646 -2.818 1.014 O9 SKK 9 SKK C10 C10 C 0 1 N N N 49.469 50.157 37.576 4.701 3.062 0.330 C10 SKK 10 SKK C11 C11 C 0 1 N N S 48.446 50.443 38.598 5.527 1.890 0.661 C11 SKK 11 SKK C12 C12 C 0 1 N N N 48.263 49.327 39.640 6.922 2.032 0.016 C12 SKK 12 SKK C13 C13 C 0 1 N N N 46.753 49.179 39.821 7.244 0.583 -0.436 C13 SKK 13 SKK C14 C14 C 0 1 N N N 46.162 49.591 38.475 5.845 0.071 -0.860 C14 SKK 14 SKK C15 C15 C 0 1 N N N 46.883 51.439 37.012 3.701 0.186 0.442 C15 SKK 15 SKK C16 C16 C 0 1 N N N 45.476 51.429 36.407 3.197 -1.081 -0.200 C16 SKK 16 SKK C17 C17 C 0 1 N N N 45.727 51.273 33.872 1.338 -2.631 -0.280 C17 SKK 17 SKK C18 C18 C 0 1 N N N 47.259 51.185 33.693 1.239 -2.452 -1.796 C18 SKK 18 SKK C19 C19 C 0 1 N N N 45.146 49.834 33.949 2.279 -3.795 0.036 C19 SKK 19 SKK C20 C20 C 0 1 N N N 45.108 52.025 32.677 -0.051 -2.928 0.290 C20 SKK 20 SKK C21 C21 C 0 1 N N N 44.221 51.202 30.535 -2.236 -1.855 0.395 C21 SKK 21 SKK C22 C22 C 0 1 Y N N 44.488 50.301 29.361 -3.144 -0.732 0.090 C22 SKK 22 SKK C23 C23 C 0 1 Y N N 45.503 49.373 29.398 -4.461 -0.764 0.503 C23 SKK 23 SKK C24 C24 C 0 1 Y N N 43.696 50.385 28.186 -2.677 0.394 -0.629 C24 SKK 24 SKK C25 C25 C 0 1 Y N N 44.874 48.729 27.140 -4.771 1.359 -0.496 C25 SKK 25 SKK C26 C26 C 0 1 Y N N 45.362 47.815 26.259 -5.813 2.261 -0.648 C26 SKK 26 SKK C27 C27 C 0 1 Y N N 46.438 47.170 26.910 -6.933 1.718 -0.033 C27 SKK 27 SKK C28 C28 C 0 1 N N N 47.301 46.088 26.348 -8.292 2.366 0.041 C28 SKK 28 SKK H1 H1 H 0 1 N N N 46.012 52.863 35.092 1.226 -0.628 0.185 H1 SKK 29 SKK H3 H3 H 0 1 N N N 46.002 50.657 31.321 -0.624 -1.045 -0.506 H3 SKK 30 SKK H4 H4 H 0 1 N N N 48.688 51.382 39.117 5.624 1.799 1.743 H4 SKK 31 SKK H5 H5 H 0 1 N N N 48.700 48.386 39.276 6.884 2.704 -0.841 H5 SKK 32 SKK H6 H6 H 0 1 N N N 48.738 49.608 40.591 7.652 2.379 0.748 H6 SKK 33 SKK H7 H7 H 0 1 N N N 46.391 49.840 40.623 7.933 0.581 -1.280 H7 SKK 34 SKK H8 H8 H 0 1 N N N 46.490 48.137 40.058 7.642 -0.005 0.391 H8 SKK 35 SKK H9 H9 H 0 1 N N N 45.180 50.070 38.602 5.805 -1.017 -0.799 H9 SKK 36 SKK H10 H10 H 0 1 N N N 46.065 48.726 37.802 5.609 0.404 -1.870 H10 SKK 37 SKK H11 H11 H 0 1 N N N 44.799 51.957 37.095 3.880 -1.900 0.025 H11 SKK 38 SKK H12 H12 H 0 1 N N N 45.151 50.383 36.303 3.139 -0.943 -1.280 H12 SKK 39 SKK H13 H13 H 0 1 N N N 47.698 50.648 34.547 0.850 -3.366 -2.245 H13 SKK 40 SKK H14 H14 H 0 1 N N N 47.489 50.645 32.763 0.568 -1.623 -2.021 H14 SKK 41 SKK H15 H15 H 0 1 N N N 47.681 52.200 33.642 2.228 -2.240 -2.203 H15 SKK 42 SKK H16 H16 H 0 1 N N N 45.592 49.303 34.803 2.350 -3.922 1.116 H16 SKK 43 SKK H17 H17 H 0 1 N N N 44.055 49.886 34.078 1.890 -4.708 -0.413 H17 SKK 44 SKK H18 H18 H 0 1 N N N 45.380 49.294 33.020 3.268 -3.583 -0.370 H18 SKK 45 SKK H19 H19 H 0 1 N N N 45.653 52.968 32.522 0.020 -3.055 1.371 H19 SKK 46 SKK H20 H20 H 0 1 N N N 44.052 52.244 32.895 -0.440 -3.842 -0.159 H20 SKK 47 SKK H21 H21 H 0 1 N N N 46.132 49.262 30.269 -4.844 -1.611 1.054 H21 SKK 48 SKK H22 H22 H 0 1 N N N 42.896 51.111 28.172 -1.650 0.436 -0.959 H22 SKK 49 SKK H23 H23 H 0 1 N N N 44.999 47.621 25.260 -5.763 3.214 -1.153 H23 SKK 50 SKK H24 H24 H 0 1 N N N 48.050 45.790 27.096 -8.884 2.069 -0.825 H24 SKK 51 SKK H25 H25 H 0 1 N N N 46.678 45.220 26.087 -8.797 2.049 0.953 H25 SKK 52 SKK H26 H26 H 0 1 N N N 47.811 46.457 25.446 -8.178 3.450 0.047 H26 SKK 53 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SKK C26 C27 SING Y N 1 SKK C26 C25 DOUB Y N 2 SKK C28 C27 SING N N 3 SKK C27 N7 DOUB Y N 4 SKK N5 C25 SING Y N 5 SKK N5 C24 DOUB Y N 6 SKK C25 N6 SING Y N 7 SKK N7 N6 SING Y N 8 SKK C24 C22 SING Y N 9 SKK N6 C23 SING Y N 10 SKK C22 C23 DOUB Y N 11 SKK C22 C21 SING N N 12 SKK C21 O9 DOUB N N 13 SKK C21 N4 SING N N 14 SKK N4 C20 SING N N 15 SKK C20 C17 SING N N 16 SKK C18 C17 SING N N 17 SKK C17 C19 SING N N 18 SKK C17 N3 SING N N 19 SKK N3 C16 SING N N 20 SKK C16 C15 SING N N 21 SKK O8 C15 DOUB N N 22 SKK N1 C10 TRIP N N 23 SKK C15 N2 SING N N 24 SKK C10 C11 SING N N 25 SKK N2 C14 SING N N 26 SKK N2 C11 SING N N 27 SKK C14 C13 SING N N 28 SKK C11 C12 SING N N 29 SKK C12 C13 SING N N 30 SKK N3 H1 SING N N 31 SKK N4 H3 SING N N 32 SKK C11 H4 SING N N 33 SKK C12 H5 SING N N 34 SKK C12 H6 SING N N 35 SKK C13 H7 SING N N 36 SKK C13 H8 SING N N 37 SKK C14 H9 SING N N 38 SKK C14 H10 SING N N 39 SKK C16 H11 SING N N 40 SKK C16 H12 SING N N 41 SKK C18 H13 SING N N 42 SKK C18 H14 SING N N 43 SKK C18 H15 SING N N 44 SKK C19 H16 SING N N 45 SKK C19 H17 SING N N 46 SKK C19 H18 SING N N 47 SKK C20 H19 SING N N 48 SKK C20 H20 SING N N 49 SKK C23 H21 SING N N 50 SKK C24 H22 SING N N 51 SKK C26 H23 SING N N 52 SKK C28 H24 SING N N 53 SKK C28 H25 SING N N 54 SKK C28 H26 SING N N 55 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SKK SMILES ACDLabs 12.01 "N#CC3N(C(=O)CNC(C)(C)CNC(=O)c1cn2nc(cc2nc1)C)CCC3" SKK InChI InChI 1.03 "InChI=1S/C19H25N7O2/c1-13-7-16-21-9-14(11-26(16)24-13)18(28)22-12-19(2,3)23-10-17(27)25-6-4-5-15(25)8-20/h7,9,11,15,23H,4-6,10,12H2,1-3H3,(H,22,28)/t15-/m0/s1" SKK InChIKey InChI 1.03 LDXYBEHACFJIEL-HNNXBMFYSA-N SKK SMILES_CANONICAL CACTVS 3.385 "Cc1cc2ncc(cn2n1)C(=O)NCC(C)(C)NCC(=O)N3CCC[C@H]3C#N" SKK SMILES CACTVS 3.385 "Cc1cc2ncc(cn2n1)C(=O)NCC(C)(C)NCC(=O)N3CCC[CH]3C#N" SKK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1cc2ncc(cn2n1)C(=O)NCC(C)(C)NCC(=O)N3CCC[C@H]3C#N" SKK SMILES "OpenEye OEToolkits" 1.7.6 "Cc1cc2ncc(cn2n1)C(=O)NCC(C)(C)NCC(=O)N3CCCC3C#N" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SKK "SYSTEMATIC NAME" ACDLabs 12.01 "N-[2-({2-[(2S)-2-cyanopyrrolidin-1-yl]-2-oxoethyl}amino)-2-methylpropyl]-2-methylpyrazolo[1,5-a]pyrimidine-6-carboxamide" SKK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[2-[[2-[(2S)-2-cyanopyrrolidin-1-yl]-2-oxidanylidene-ethyl]amino]-2-methyl-propyl]-2-methyl-pyrazolo[1,5-a]pyrimidine-6-carboxamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SKK "Create component" 2014-02-07 PDBJ SKK "Initial release" 2015-07-15 RCSB SKK "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id SKK _pdbx_chem_comp_synonyms.name Anagliptin _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##