data_SKO # _chem_comp.id SKO _chem_comp.name "N'-[6-[2-(6-AZANYL-4-METHYL-PYRIDIN-2-YL)ETHYL]PYRIDIN-2-YL]-N,N'-DIMETHYL-ETHANE-1,2-DIAMINE" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H25 N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-03-22 _chem_comp.pdbx_modified_date 2015-06-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 299.414 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SKO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4UGI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SKO N02 N02 N 0 1 N N N 1.571 17.478 27.503 4.674 -0.244 -2.623 N02 SKO 1 SKO C02 C02 C 0 1 Y N N 2.478 17.847 26.566 4.241 -0.194 -1.303 C02 SKO 2 SKO C03 C03 C 0 1 Y N N 2.250 18.954 25.749 5.157 -0.363 -0.270 C03 SKO 3 SKO C04 C04 C 0 1 Y N N 3.206 19.300 24.802 4.713 -0.311 1.039 C04 SKO 4 SKO C07 C07 C 0 1 N N N 2.992 20.487 23.898 5.674 -0.488 2.186 C07 SKO 5 SKO C05 C05 C 0 1 Y N N 4.373 18.550 24.704 3.362 -0.091 1.272 C05 SKO 6 SKO N01 N01 N 0 1 Y N N 3.612 17.108 26.439 2.961 0.019 -1.040 N01 SKO 7 SKO C06 C06 C 0 1 Y N N 4.557 17.444 25.538 2.508 0.068 0.199 C06 SKO 8 SKO C08 C08 C 0 1 N N N 5.801 16.594 25.446 1.040 0.306 0.445 C08 SKO 9 SKO C09 C09 C 0 1 N N N 5.465 15.358 24.610 0.605 1.588 -0.268 C09 SKO 10 SKO C12 C12 C 0 1 Y N N 5.666 15.732 23.162 -0.863 1.826 -0.022 C12 SKO 11 SKO C13 C13 C 0 1 Y N N 4.681 16.429 22.460 -1.277 3.030 0.513 C13 SKO 12 SKO C14 C14 C 0 1 Y N N 4.892 16.802 21.139 -2.630 3.244 0.737 C14 SKO 13 SKO C15 C15 C 0 1 Y N N 6.111 16.453 20.568 -3.521 2.236 0.414 C15 SKO 14 SKO N11 N11 N 0 1 Y N N 6.829 15.390 22.565 -1.735 0.884 -0.325 N11 SKO 15 SKO C16 C16 C 0 1 Y N N 7.059 15.732 21.285 -3.033 1.049 -0.121 C16 SKO 16 SKO N17 N17 N 0 1 N N N 8.257 15.361 20.666 -3.917 0.027 -0.450 N17 SKO 17 SKO C17 C17 C 0 1 N N N 8.644 16.023 19.428 -5.361 0.243 -0.335 C17 SKO 18 SKO C18 C18 C 0 1 N N N 9.084 14.295 21.233 -3.404 -1.265 -0.911 C18 SKO 19 SKO C19 C19 C 0 1 N N N 8.781 13.000 20.467 -3.188 -2.186 0.291 C19 SKO 20 SKO N20 N20 N 0 1 N N N 7.367 12.620 20.649 -2.673 -3.482 -0.171 N20 SKO 21 SKO C21 C21 C 0 1 N N N 7.204 11.176 20.372 -2.453 -4.395 0.959 C21 SKO 22 SKO H021 H021 H 0 0 N N N 1.901 16.666 27.985 5.611 -0.396 -2.820 H021 SKO 23 SKO H022 H022 H 0 0 N N N 1.444 18.225 28.156 4.037 -0.131 -3.346 H022 SKO 24 SKO H03 H03 H 0 1 N N N 1.344 19.533 25.851 6.202 -0.532 -0.487 H03 SKO 25 SKO H071 H071 H 0 0 N N N 3.400 21.390 24.375 6.073 0.483 2.480 H071 SKO 26 SKO H072 H072 H 0 0 N N N 3.505 20.315 22.940 5.152 -0.936 3.031 H072 SKO 27 SKO H073 H073 H 0 0 N N N 1.915 20.622 23.719 6.492 -1.138 1.878 H073 SKO 28 SKO H05 H05 H 0 1 N N N 5.134 18.821 23.987 2.983 -0.045 2.282 H05 SKO 29 SKO H081 H081 H 0 0 N N N 6.608 17.164 24.963 0.466 -0.537 0.061 H081 SKO 30 SKO H082 H082 H 0 0 N N N 6.120 16.288 26.453 0.864 0.408 1.516 H082 SKO 31 SKO H091 H091 H 0 0 N N N 6.132 14.527 24.881 1.180 2.431 0.116 H091 SKO 32 SKO H092 H092 H 0 0 N N N 4.420 15.060 24.781 0.782 1.485 -1.339 H092 SKO 33 SKO H13 H13 H 0 1 N N N 3.750 16.679 22.947 -0.556 3.796 0.755 H13 SKO 34 SKO H14 H14 H 0 1 N N N 4.141 17.340 20.579 -2.979 4.177 1.155 H14 SKO 35 SKO H15 H15 H 0 1 N N N 6.325 16.747 19.551 -4.580 2.369 0.576 H15 SKO 36 SKO H171 H171 H 0 0 N N N 9.604 15.615 19.078 -5.747 0.632 -1.278 H171 SKO 37 SKO H172 H172 H 0 0 N N N 7.872 15.851 18.663 -5.853 -0.702 -0.104 H172 SKO 38 SKO H173 H173 H 0 0 N N N 8.748 17.103 19.607 -5.560 0.960 0.462 H173 SKO 39 SKO H181 H181 H 0 0 N N N 10.148 14.552 21.126 -4.123 -1.720 -1.592 H181 SKO 40 SKO H182 H182 H 0 0 N N N 8.844 14.163 22.298 -2.457 -1.116 -1.430 H182 SKO 41 SKO H191 H191 H 0 0 N N N 8.981 13.156 19.397 -2.468 -1.732 0.972 H191 SKO 42 SKO H192 H192 H 0 0 N N N 9.426 12.194 20.847 -4.135 -2.336 0.810 H192 SKO 43 SKO H20 H20 H 0 1 N N N 7.089 12.812 21.590 -3.292 -3.894 -0.854 H20 SKO 44 SKO H211 H211 H 0 0 N N N 6.150 10.893 20.508 -1.728 -3.956 1.644 H211 SKO 45 SKO H212 H212 H 0 0 N N N 7.510 10.965 19.337 -3.395 -4.559 1.482 H212 SKO 46 SKO H213 H213 H 0 0 N N N 7.831 10.597 21.065 -2.072 -5.346 0.588 H213 SKO 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SKO N02 C02 SING N N 1 SKO C02 C03 SING Y N 2 SKO C02 N01 DOUB Y N 3 SKO C03 C04 DOUB Y N 4 SKO C04 C07 SING N N 5 SKO C04 C05 SING Y N 6 SKO C05 C06 DOUB Y N 7 SKO N01 C06 SING Y N 8 SKO C06 C08 SING N N 9 SKO C08 C09 SING N N 10 SKO C09 C12 SING N N 11 SKO C12 C13 SING Y N 12 SKO C12 N11 DOUB Y N 13 SKO C13 C14 DOUB Y N 14 SKO C14 C15 SING Y N 15 SKO C15 C16 DOUB Y N 16 SKO N11 C16 SING Y N 17 SKO C16 N17 SING N N 18 SKO N17 C17 SING N N 19 SKO N17 C18 SING N N 20 SKO C18 C19 SING N N 21 SKO C19 N20 SING N N 22 SKO N20 C21 SING N N 23 SKO N02 H021 SING N N 24 SKO N02 H022 SING N N 25 SKO C03 H03 SING N N 26 SKO C07 H071 SING N N 27 SKO C07 H072 SING N N 28 SKO C07 H073 SING N N 29 SKO C05 H05 SING N N 30 SKO C08 H081 SING N N 31 SKO C08 H082 SING N N 32 SKO C09 H091 SING N N 33 SKO C09 H092 SING N N 34 SKO C13 H13 SING N N 35 SKO C14 H14 SING N N 36 SKO C15 H15 SING N N 37 SKO C17 H171 SING N N 38 SKO C17 H172 SING N N 39 SKO C17 H173 SING N N 40 SKO C18 H181 SING N N 41 SKO C18 H182 SING N N 42 SKO C19 H191 SING N N 43 SKO C19 H192 SING N N 44 SKO N20 H20 SING N N 45 SKO C21 H211 SING N N 46 SKO C21 H212 SING N N 47 SKO C21 H213 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SKO InChI InChI 1.03 "InChI=1S/C17H25N5/c1-13-11-15(20-16(18)12-13)8-7-14-5-4-6-17(21-14)22(3)10-9-19-2/h4-6,11-12,19H,7-10H2,1-3H3,(H2,18,20)" SKO InChIKey InChI 1.03 AVQUEPVPLWZPMB-UHFFFAOYSA-N SKO SMILES_CANONICAL CACTVS 3.385 "CNCCN(C)c1cccc(CCc2cc(C)cc(N)n2)n1" SKO SMILES CACTVS 3.385 "CNCCN(C)c1cccc(CCc2cc(C)cc(N)n2)n1" SKO SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1cc(nc(c1)N)CCc2cccc(n2)N(C)CCNC" SKO SMILES "OpenEye OEToolkits" 1.7.6 "Cc1cc(nc(c1)N)CCc2cccc(n2)N(C)CCNC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SKO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N'-[6-[2-(6-azanyl-4-methyl-pyridin-2-yl)ethyl]pyridin-2-yl]-N,N'-dimethyl-ethane-1,2-diamine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SKO "Create component" 2015-03-22 EBI SKO "Initial release" 2015-06-24 RCSB #