data_SKP # _chem_comp.id SKP _chem_comp.name "5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-4-HYDROXY-3-PHOSPHONOOXY-CYCLOHEX-1-ENECARBOXYLIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H16 O14 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-SHIKIMATE-3-PHOSPHATE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-08-13 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 422.173 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SKP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1Q36 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SKP C1 C1 C 0 1 N N N 56.139 12.125 27.856 -2.338 -0.025 -1.381 C1 SKP 1 SKP C2 C2 C 0 1 N N N 54.964 11.368 28.067 -1.539 0.007 -2.427 C2 SKP 2 SKP C3 C3 C 0 1 N N R 55.056 10.088 28.900 -0.170 -0.605 -2.451 C3 SKP 3 SKP C4 C4 C 0 1 N N S 56.326 10.067 29.826 -0.015 -1.600 -1.300 C4 SKP 4 SKP C5 C5 C 0 1 N N R 57.582 10.266 28.968 -0.475 -0.922 -0.003 C5 SKP 5 SKP C6 C6 C 0 1 N N N 57.460 11.734 28.408 -1.985 -0.688 -0.082 C6 SKP 6 SKP C7 C7 C 0 1 N N N 56.027 13.388 27.065 -3.651 0.624 -1.493 C7 SKP 7 SKP O1 O1 O 0 1 N N N 55.041 8.910 27.984 0.812 0.423 -2.315 O1 SKP 8 SKP O2 O2 O 0 1 N N N 56.360 8.804 30.511 1.354 -1.994 -1.186 O2 SKP 9 SKP O3 O3 O 0 1 N N N 58.743 10.178 29.805 -0.177 -1.765 1.111 O3 SKP 10 SKP O4 O4 O 0 1 N N N 55.188 13.431 26.178 -4.500 0.613 -0.445 O4 SKP 11 SKP O5 O5 O 0 1 N N N 56.780 14.271 27.347 -3.973 1.171 -2.529 O5 SKP 12 SKP P1 P1 P 0 1 N N N 53.750 7.981 27.800 1.730 0.367 -3.636 P1 SKP 13 SKP O6 O6 O 0 1 N N N 52.618 8.831 27.178 0.889 0.599 -4.831 O6 SKP 14 SKP O7 O7 O 0 1 N N N 53.397 7.456 29.245 2.865 1.506 -3.549 O7 SKP 15 SKP O8 O8 O 0 1 N N N 54.244 6.906 26.812 2.429 -1.078 -3.744 O8 SKP 16 SKP C8 C8 C 0 1 N N S 59.701 9.121 29.752 0.046 -0.905 2.230 C8 SKP 17 SKP C9 C9 C 0 1 N N N 59.120 7.685 29.603 0.372 -1.749 3.464 C9 SKP 18 SKP C10 C10 C 0 1 N N N 60.522 9.209 31.004 -1.192 -0.089 2.493 C10 SKP 19 SKP O9 O9 O 0 1 N N N 61.292 10.214 30.954 -1.281 1.033 2.055 O9 SKP 20 SKP O10 O10 O 0 1 N N N 60.413 8.442 31.981 -2.198 -0.609 3.213 O10 SKP 21 SKP P2 P2 P 0 1 N N N 60.524 9.348 26.931 1.508 0.714 3.327 P2 SKP 22 SKP O11 O11 O 0 1 N N N 61.753 8.687 26.285 2.211 -0.227 4.225 O11 SKP 23 SKP O12 O12 O 0 1 N N N 60.482 10.818 26.599 2.461 1.974 3.018 O12 SKP 24 SKP O13 O13 O 0 1 N N N 59.237 8.595 26.471 0.156 1.225 4.036 O13 SKP 25 SKP O14 O14 O 0 1 N N N 60.663 9.254 28.594 1.141 -0.031 1.948 O14 SKP 26 SKP H2 H2 H 0 1 N N N 54.035 11.751 27.611 -1.890 0.504 -3.320 H2 SKP 27 SKP H3 H3 H 0 1 N N N 54.173 10.047 29.580 -0.022 -1.123 -3.399 H3 SKP 28 SKP H4 H4 H 0 1 N N N 56.287 10.889 30.577 -0.634 -2.477 -1.488 H4 SKP 29 SKP H5 H5 H 0 1 N N N 57.671 9.504 28.158 0.037 0.032 0.111 H5 SKP 30 SKP H61 1H6 H 0 1 N N N 58.252 11.911 27.644 -2.503 -1.645 -0.013 H61 SKP 31 SKP H62 2H6 H 0 1 N N N 57.768 12.462 29.194 -2.296 -0.051 0.744 H62 SKP 32 SKP HO2 HO2 H 0 1 N N N 57.127 8.791 31.070 1.597 -2.404 -2.028 HO2 SKP 33 SKP HO4 HO4 H 0 1 N N N 55.116 14.233 25.675 -5.364 1.040 -0.518 HO4 SKP 34 SKP HO7 HO7 H 0 1 N N N 52.631 6.904 29.135 3.391 1.439 -4.358 HO7 SKP 35 SKP HO8 HO8 H 0 1 N N N 53.478 6.354 26.702 2.966 -1.189 -2.947 HO8 SKP 36 SKP H91 1H9 H 0 1 N N N 59.868 6.859 29.561 1.375 -2.165 3.365 H91 SKP 37 SKP H92 2H9 H 0 1 N N N 58.382 7.488 30.415 0.324 -1.123 4.355 H92 SKP 38 SKP H93 3H9 H 0 1 N N N 58.452 7.636 28.711 -0.350 -2.560 3.550 H93 SKP 39 SKP H10 H10 H 0 1 N N N 60.933 8.497 32.774 -2.994 -0.086 3.382 H10 SKP 40 SKP H12 H12 H 0 1 N N N 59.722 11.226 26.998 2.657 2.392 3.868 H12 SKP 41 SKP H13 H13 H 0 1 N N N 58.477 9.003 26.870 -0.104 2.040 3.586 H13 SKP 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SKP C1 C2 DOUB N N 1 SKP C1 C6 SING N N 2 SKP C1 C7 SING N N 3 SKP C2 C3 SING N N 4 SKP C2 H2 SING N N 5 SKP C3 C4 SING N N 6 SKP C3 O1 SING N N 7 SKP C3 H3 SING N N 8 SKP C4 C5 SING N N 9 SKP C4 O2 SING N N 10 SKP C4 H4 SING N N 11 SKP C5 C6 SING N N 12 SKP C5 O3 SING N N 13 SKP C5 H5 SING N N 14 SKP C6 H61 SING N N 15 SKP C6 H62 SING N N 16 SKP C7 O4 SING N N 17 SKP C7 O5 DOUB N N 18 SKP O1 P1 SING N N 19 SKP O2 HO2 SING N N 20 SKP O3 C8 SING N N 21 SKP O4 HO4 SING N N 22 SKP P1 O6 DOUB N N 23 SKP P1 O7 SING N N 24 SKP P1 O8 SING N N 25 SKP O7 HO7 SING N N 26 SKP O8 HO8 SING N N 27 SKP C8 C9 SING N N 28 SKP C8 C10 SING N N 29 SKP C8 O14 SING N N 30 SKP C9 H91 SING N N 31 SKP C9 H92 SING N N 32 SKP C9 H93 SING N N 33 SKP C10 O9 DOUB N N 34 SKP C10 O10 SING N N 35 SKP O10 H10 SING N N 36 SKP P2 O11 DOUB N N 37 SKP P2 O12 SING N N 38 SKP P2 O13 SING N N 39 SKP P2 O14 SING N N 40 SKP O12 H12 SING N N 41 SKP O13 H13 SING N N 42 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SKP SMILES ACDLabs 10.04 "O=C(O)C(OP(=O)(O)O)(OC1CC(=CC(OP(=O)(O)O)C1O)C(=O)O)C" SKP SMILES_CANONICAL CACTVS 3.341 "C[C@](O[C@@H]1CC(=C[C@@H](O[P](O)(O)=O)[C@H]1O)C(O)=O)(O[P](O)(O)=O)C(O)=O" SKP SMILES CACTVS 3.341 "C[C](O[CH]1CC(=C[CH](O[P](O)(O)=O)[CH]1O)C(O)=O)(O[P](O)(O)=O)C(O)=O" SKP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C[C@](C(=O)O)(O[C@@H]1CC(=C[C@H]([C@H]1O)OP(=O)(O)O)C(=O)O)OP(=O)(O)O" SKP SMILES "OpenEye OEToolkits" 1.5.0 "CC(C(=O)O)(OC1CC(=CC(C1O)OP(=O)(O)O)C(=O)O)OP(=O)(O)O" SKP InChI InChI 1.03 "InChI=1S/C10H16O14P2/c1-10(9(14)15,24-26(19,20)21)22-5-2-4(8(12)13)3-6(7(5)11)23-25(16,17)18/h3,5-7,11H,2H2,1H3,(H,12,13)(H,14,15)(H2,16,17,18)(H2,19,20,21)/t5-,6-,7+,10+/m1/s1" SKP InChIKey InChI 1.03 QUQKBSPZUVNKIF-JQCUSGDOSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SKP "SYSTEMATIC NAME" ACDLabs 10.04 "(3R,4S,5R)-5-[(1S)-1-carboxy-1-(phosphonooxy)ethoxy]-4-hydroxy-3-(phosphonooxy)cyclohex-1-ene-1-carboxylic acid" SKP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(3R,4S,5R)-4-hydroxy-5-[(2S)-1-hydroxy-1-oxo-2-phosphonooxy-propan-2-yl]oxy-3-phosphonooxy-cyclohexene-1-carboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SKP "Create component" 2003-08-13 RCSB SKP "Modify descriptor" 2011-06-04 RCSB SKP "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id SKP _pdbx_chem_comp_synonyms.name "5-(1-CARBOXY-1-PHOSPHONOOXY-ETHOXYL)-SHIKIMATE-3-PHOSPHATE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##