data_SLD # _chem_comp.id SLD _chem_comp.name "(3Z)-N-[(4E)-5-(4-{(5S)-5-[(acetylamino)methyl]-2-oxo-1,3-oxazolidin-3-yl}-2-fluorophenyl)pent-4-en-1-yl]-3-(4-methyl-2,6-dioxo-1,6-dihydropyrimidin-5(2H)-ylidene)propanamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H28 F N5 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2008-07-16 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 513.518 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SLD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3CXC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SLD C1 C1 C 0 1 Y N N 66.871 119.210 100.404 -4.172 0.033 -0.678 C1 SLD 1 SLD C2 C2 C 0 1 Y N N 66.243 120.489 100.872 -5.016 0.002 0.425 C2 SLD 2 SLD C3 C3 C 0 1 Y N N 68.204 118.809 100.888 -2.895 0.539 -0.559 C3 SLD 3 SLD N1 N1 N 0 1 N N N 64.939 120.822 100.321 -6.310 -0.512 0.300 N1 SLD 4 SLD C4 C4 C 0 1 Y N N 66.897 121.367 101.788 -4.577 0.481 1.654 C4 SLD 5 SLD C5 C5 C 0 1 N N N 64.545 120.338 98.972 -6.949 -0.920 -0.961 C5 SLD 6 SLD C6 C6 C 0 1 N N N 63.846 121.608 100.856 -7.168 -0.718 1.308 C6 SLD 7 SLD C7 C7 C 0 1 N N S 63.168 120.993 98.778 -8.347 -1.401 -0.524 C7 SLD 8 SLD C8 C8 C 0 1 N N N 63.121 121.752 97.466 -9.436 -0.547 -1.176 C8 SLD 9 SLD O1 O1 O 0 1 N N N 62.996 121.951 99.798 -8.346 -1.219 0.922 O1 SLD 10 SLD N2 N2 N 0 1 N N N 63.743 123.058 97.720 -10.753 -1.024 -0.746 N2 SLD 11 SLD C9 C9 C 0 1 N N N 65.066 123.363 97.586 -11.869 -0.417 -1.196 C9 SLD 12 SLD C10 C10 C 0 1 N N N 65.477 124.773 97.903 -13.224 -0.908 -0.754 C10 SLD 13 SLD O2 O2 O 0 1 N N N 65.938 122.525 97.219 -11.783 0.522 -1.958 O2 SLD 14 SLD O3 O3 O 0 1 N N N 63.774 121.884 102.007 -6.900 -0.472 2.467 O3 SLD 15 SLD C11 C11 C 0 1 Y N N 68.217 120.962 102.267 -3.299 0.989 1.781 C11 SLD 16 SLD C12 C12 C 0 1 Y N N 68.930 119.696 101.787 -2.449 1.021 0.672 C12 SLD 17 SLD F1 F1 F 0 1 N N N 68.857 121.898 103.151 -2.872 1.455 2.975 F1 SLD 18 SLD C2B C2B C 0 1 N N N 70.326 119.257 102.261 -1.081 1.564 0.803 C2B SLD 19 SLD C3B C3B C 0 1 N N N 71.152 119.956 103.056 -0.275 1.592 -0.250 C3B SLD 20 SLD C4B C4B C 0 1 N N N 72.503 119.512 103.410 1.120 2.145 -0.117 C4B SLD 21 SLD C5B C5B C 0 1 N N N 72.420 118.529 104.535 2.131 1.101 -0.595 C5B SLD 22 SLD CAS CAS C 0 1 N N N 73.671 117.845 105.129 3.548 1.663 -0.459 CAS SLD 23 SLD N5S N5S N 0 1 N N N 74.979 117.979 104.502 4.515 0.663 -0.918 N5S SLD 24 SLD C0S C0S C 0 1 N N N 75.511 116.933 103.970 5.834 0.939 -0.890 C0S SLD 25 SLD C9S C9S C 0 1 N N N 76.811 117.248 103.471 6.830 -0.089 -1.361 C9S SLD 26 SLD O2S O2S O 0 1 N N N 74.948 115.813 103.936 6.220 2.016 -0.485 O2S SLD 27 SLD C8S C8S C 0 1 N N N 77.467 116.225 102.878 8.225 0.464 -1.227 C8S SLD 28 SLD C1S C1S C 0 1 N N N 79.834 117.473 102.190 8.997 -1.693 -0.280 C1S SLD 29 SLD O1S O1S O 0 1 N N N 79.507 118.557 102.700 7.984 -2.281 -0.605 O1S SLD 30 SLD N2S N2S N 0 1 N N N 81.124 117.336 101.532 10.000 -2.329 0.363 N2S SLD 31 SLD C3S C3S C 0 1 N N N 81.533 116.131 100.924 11.116 -1.676 0.719 C3S SLD 32 SLD O3S O3S O 0 1 N N N 82.638 116.089 100.342 11.988 -2.299 1.296 O3S SLD 33 SLD N4S N4S N 0 1 N N N 80.733 115.003 100.945 11.323 -0.377 0.475 N4S SLD 34 SLD C5S C5S C 0 1 N N N 79.421 114.960 101.561 10.439 0.370 -0.140 C5S SLD 35 SLD C7S C7S C 0 1 N N N 78.611 113.619 101.509 10.710 1.830 -0.396 C7S SLD 36 SLD C6S C6S C 0 1 N N N 78.908 116.197 102.223 9.179 -0.251 -0.581 C6S SLD 37 SLD H1 H1 H 0 1 N N N 66.342 118.578 99.706 -4.515 -0.345 -1.630 H1 SLD 38 SLD H3 H3 H 0 1 N N N 68.637 117.869 100.580 -2.240 0.561 -1.418 H3 SLD 39 SLD H4 H4 H 0 1 N N N 66.437 122.289 102.112 -5.235 0.456 2.509 H4 SLD 40 SLD H5 H5 H 0 1 N N N 65.261 120.651 98.198 -7.031 -0.072 -1.641 H5 SLD 41 SLD H5A H5A H 0 1 N N N 64.523 119.241 98.890 -6.393 -1.733 -1.426 H5A SLD 42 SLD H7 H7 H 0 1 N N N 62.396 120.210 98.794 -8.485 -2.453 -0.776 H7 SLD 43 SLD H8 H8 H 0 1 N N N 63.673 121.207 96.686 -9.310 0.493 -0.876 H8 SLD 44 SLD H8A H8A H 0 1 N N N 62.086 121.867 97.110 -9.358 -0.624 -2.260 H8A SLD 45 SLD HN2 HN2 H 0 1 N N N 63.138 123.795 98.020 -10.821 -1.776 -0.137 HN2 SLD 46 SLD H10 H10 H 0 1 N N N 65.577 124.890 98.992 -13.523 -0.381 0.152 H10 SLD 47 SLD H10A H10A H 0 0 N N N 66.441 124.991 97.420 -13.953 -0.719 -1.541 H10A SLD 48 SLD H10B H10B H 0 0 N N N 64.713 125.470 97.528 -13.175 -1.978 -0.553 H10B SLD 49 SLD H2B H2B H 0 1 N N N 70.676 118.293 101.921 -0.737 1.937 1.756 H2B SLD 50 SLD H3B H3B H 0 1 N N N 70.802 120.896 103.456 -0.619 1.219 -1.204 H3B SLD 51 SLD H4B H4B H 0 1 N N N 72.974 119.035 102.538 1.214 3.046 -0.723 H4B SLD 52 SLD H4BA H4BA H 0 0 N N N 73.106 120.378 103.720 1.316 2.389 0.928 H4BA SLD 53 SLD H5B H5B H 0 1 N N N 71.964 119.080 105.371 2.037 0.200 0.011 H5B SLD 54 SLD H5BA H5BA H 0 0 N N N 71.888 117.685 104.072 1.935 0.858 -1.640 H5BA SLD 55 SLD HAS HAS H 0 1 N N N 73.783 118.259 106.142 3.641 2.564 -1.066 HAS SLD 56 SLD HASA HASA H 0 0 N N N 73.448 116.775 105.005 3.743 1.906 0.585 HASA SLD 57 SLD HN5S HN5S H 0 0 N N N 75.452 118.860 104.485 4.207 -0.198 -1.241 HN5S SLD 58 SLD H9S H9S H 0 1 N N N 76.695 118.046 102.723 6.736 -0.990 -0.754 H9S SLD 59 SLD H9SA H9SA H 0 0 N N N 77.414 117.534 104.345 6.634 -0.333 -2.405 H9SA SLD 60 SLD H8S H8S H 0 1 N N N 76.929 115.289 102.847 8.465 1.430 -1.646 H8S SLD 61 SLD HN2S HN2S H 0 0 N N N 81.741 118.122 101.510 9.912 -3.273 0.570 HN2S SLD 62 SLD H7S H7S H 0 1 N N N 78.421 113.345 100.461 11.691 2.092 -0.000 H7S SLD 63 SLD H7SA H7SA H 0 0 N N N 79.191 112.822 101.997 10.688 2.020 -1.469 H7SA SLD 64 SLD H7SB H7SB H 0 0 N N N 77.653 113.749 102.033 9.946 2.432 0.096 H7SB SLD 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SLD C1 C2 DOUB Y N 1 SLD C1 C3 SING Y N 2 SLD C2 N1 SING N N 3 SLD C2 C4 SING Y N 4 SLD C3 C12 DOUB Y N 5 SLD N1 C5 SING N N 6 SLD N1 C6 SING N N 7 SLD C4 C11 DOUB Y N 8 SLD C5 C7 SING N N 9 SLD C6 O1 SING N N 10 SLD C6 O3 DOUB N N 11 SLD C7 C8 SING N N 12 SLD C7 O1 SING N N 13 SLD C8 N2 SING N N 14 SLD N2 C9 SING N N 15 SLD C9 C10 SING N N 16 SLD C9 O2 DOUB N N 17 SLD C11 C12 SING Y N 18 SLD C11 F1 SING N N 19 SLD C12 C2B SING N N 20 SLD C2B C3B DOUB N N 21 SLD C3B C4B SING N N 22 SLD C4B C5B SING N N 23 SLD C5B CAS SING N N 24 SLD CAS N5S SING N N 25 SLD N5S C0S SING N N 26 SLD C0S C9S SING N N 27 SLD C0S O2S DOUB N N 28 SLD C9S C8S SING N N 29 SLD C8S C6S DOUB N N 30 SLD C1S O1S DOUB N N 31 SLD C1S N2S SING N N 32 SLD C1S C6S SING N E 33 SLD N2S C3S SING N N 34 SLD C3S O3S DOUB N N 35 SLD C3S N4S SING N N 36 SLD N4S C5S DOUB N N 37 SLD C5S C7S SING N N 38 SLD C5S C6S SING N N 39 SLD C1 H1 SING N N 40 SLD C3 H3 SING N N 41 SLD C4 H4 SING N N 42 SLD C5 H5 SING N N 43 SLD C5 H5A SING N N 44 SLD C7 H7 SING N N 45 SLD C8 H8 SING N N 46 SLD C8 H8A SING N N 47 SLD N2 HN2 SING N N 48 SLD C10 H10 SING N N 49 SLD C10 H10A SING N N 50 SLD C10 H10B SING N N 51 SLD C2B H2B SING N N 52 SLD C3B H3B SING N Z 53 SLD C4B H4B SING N N 54 SLD C4B H4BA SING N N 55 SLD C5B H5B SING N N 56 SLD C5B H5BA SING N N 57 SLD CAS HAS SING N N 58 SLD CAS HASA SING N N 59 SLD N5S HN5S SING N N 60 SLD C9S H9S SING N N 61 SLD C9S H9SA SING N N 62 SLD C8S H8S SING N N 63 SLD N2S HN2S SING N N 64 SLD C7S H7S SING N N 65 SLD C7S H7SA SING N N 66 SLD C7S H7SB SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SLD SMILES ACDLabs 10.04 "O=C(NCC3OC(=O)N(c2ccc(/C=C/CCCNC(=O)C/C=C1/C(=NC(=O)NC1=O)C)c(F)c2)C3)C" SLD SMILES_CANONICAL CACTVS 3.341 "CC(=O)NC[C@H]1CN(C(=O)O1)c2ccc(\C=C\CCCNC(=O)C\C=C/3C(=NC(=O)NC/3=O)C)c(F)c2" SLD SMILES CACTVS 3.341 "CC(=O)NC[CH]1CN(C(=O)O1)c2ccc(C=CCCCNC(=O)CC=C3C(=NC(=O)NC3=O)C)c(F)c2" SLD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC\1=NC(=O)NC(=O)/C1=C\CC(=O)NCCC\C=C\c2ccc(cc2F)N3C[C@@H](OC3=O)CNC(=O)C" SLD SMILES "OpenEye OEToolkits" 1.5.0 "CC1=NC(=O)NC(=O)C1=CCC(=O)NCCCC=Cc2ccc(cc2F)N3CC(OC3=O)CNC(=O)C" SLD InChI InChI 1.03 "InChI=1S/C25H28FN5O6/c1-15-20(23(34)30-24(35)29-15)9-10-22(33)27-11-5-3-4-6-17-7-8-18(12-21(17)26)31-14-19(37-25(31)36)13-28-16(2)32/h4,6-9,12,19H,3,5,10-11,13-14H2,1-2H3,(H,27,33)(H,28,32)(H,30,34,35)/b6-4+,20-9-/t19-/m0/s1" SLD InChIKey InChI 1.03 UDBPSKMSYCUBIU-MTQXBESRSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SLD "SYSTEMATIC NAME" ACDLabs 10.04 "(3Z)-N-[(4E)-5-(4-{(5S)-5-[(acetylamino)methyl]-2-oxo-1,3-oxazolidin-3-yl}-2-fluorophenyl)pent-4-en-1-yl]-3-(4-methyl-2,6-dioxo-1,6-dihydropyrimidin-5(2H)-ylidene)propanamide" SLD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(3Z)-N-[(E)-5-[4-[(5S)-5-(acetamidomethyl)-2-oxo-1,3-oxazolidin-3-yl]-2-fluoro-phenyl]pent-4-enyl]-3-(4-methyl-2,6-dioxo-pyrimidin-5-ylidene)propanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SLD "Create component" 2008-07-16 RCSB SLD "Modify aromatic_flag" 2011-06-04 RCSB SLD "Modify descriptor" 2011-06-04 RCSB #