2'-[(METHYLTHIO)ETHYLOXY]-THYMIDINE-5'-MONOPHOSPHATE RNA linking ATOMN C13 H21 N2 O9 P S DT 0 2002-09-10 2018-03-14 N REL 412.353 T SMT Y Corina N 1MLX RCSB P P 0 1 N N N 10.751 4.213 5.406 -5.261 0.738 -0.269 P SMT 1 O1P O 0 1 N N N 11.971 4.728 4.682 -5.124 0.303 -1.677 OP1 SMT 2 O2P O 0 1 N N N 10.916 3.445 6.670 -5.796 2.256 -0.226 OP2 SMT 3 O3P O 0 1 N Y N -6.307 -0.221 0.490 OP3 SMT 4 O5' O 0 1 N N N 9.743 5.400 5.717 -3.828 0.654 0.460 O5' SMT 5 C5' C 0 1 N N N 9.440 6.334 4.704 -2.661 1.311 -0.038 C5' SMT 6 C4' C 0 1 N N R 8.344 7.233 5.184 -1.479 1.024 0.890 C4' SMT 7 O4' O 0 1 N N N 7.136 6.429 5.377 -1.141 -0.372 0.834 O4' SMT 8 C3' C 0 1 N N R 8.503 7.870 6.523 -0.241 1.814 0.421 C3' SMT 9 O3' O 0 1 N N N 9.445 8.960 6.469 0.201 2.705 1.447 O3' SMT 10 C2' C 0 1 N N R 7.087 8.301 6.812 0.825 0.724 0.153 C2' SMT 11 O2' O 0 1 N N N 6.828 9.421 6.046 2.110 1.141 0.621 O2' SMT 12 C1' C 0 1 N N R 6.364 7.051 6.458 0.292 -0.466 0.990 C1' SMT 13 N1 N 0 1 N N N 6.251 6.036 7.511 0.787 -1.737 0.455 N1 SMT 14 C2 C 0 1 N N N 5.185 6.193 8.395 0.483 -2.092 -0.806 C2 SMT 15 O2 O 0 1 N N N 4.390 7.127 8.249 -0.200 -1.354 -1.489 O2 SMT 16 N3 N 0 1 N N N 5.092 5.273 9.351 0.925 -3.254 -1.323 N3 SMT 17 C4 C 0 1 N N N 6.000 4.226 9.620 1.684 -4.084 -0.579 C4 SMT 18 O4 O 0 1 N N N 5.744 3.447 10.583 2.085 -5.135 -1.046 O4 SMT 19 C5 C 0 1 N N N 7.097 4.084 8.664 2.011 -3.722 0.750 C5 SMT 20 C5A C 0 1 N N N 8.129 3.062 8.827 2.858 -4.631 1.602 C5A SMT 21 C6 C 0 1 N N N 7.115 5.047 7.708 1.559 -2.548 1.241 C6 SMT 22 CA' C 0 1 N N N 5.405 9.996 6.308 2.896 1.815 -0.364 CA' SMT 23 CB C 0 1 N N N 4.242 2.214 0.244 CB SMT 24 SC S 0 1 N N N 5.241 3.069 -1.005 SC SMT 25 CD C 0 1 N N N 6.771 3.455 -0.111 CD SMT 26 H2P H 0 1 N N N 11.840 3.370 6.877 -5.909 2.608 0.667 H2P SMT 27 H3P H 0 1 N N N -7.194 -0.220 0.104 H3P SMT 28 H5' H 0 1 N N N 10.334 6.932 4.474 -2.435 0.941 -1.039 H5' SMT 29 H5'2 H 0 0 N N N 9.112 5.803 3.798 -2.838 2.385 -0.079 H5'2 SMT 30 H4' H 0 1 N N N 8.156 8.011 4.430 -1.734 1.303 1.912 H4' SMT 31 H3' H 0 1 N N N 8.820 7.119 7.261 -0.464 2.365 -0.492 H3' SMT 32 HO3 H 0 1 N Y N 9.529 9.349 7.332 -0.452 3.373 1.696 HO3 SMT 33 H2' H 0 1 N N N 6.974 8.510 7.886 0.863 0.469 -0.906 H2' SMT 34 H1' H 0 1 N N N 5.360 7.308 6.089 0.571 -0.354 2.038 H1' SMT 35 H3 H 0 1 N N N 4.290 5.329 9.945 0.696 -3.495 -2.235 H3 SMT 36 H5A H 0 1 N N N 8.851 3.134 8.000 3.126 -5.520 1.031 H5A SMT 37 H5A1 H 0 0 N N N 8.650 3.217 9.783 3.764 -4.106 1.904 H5A1 SMT 38 H5A2 H 0 0 N N N 7.663 2.066 8.821 2.296 -4.925 2.489 H5A2 SMT 39 H6 H 0 1 N N N 7.942 5.003 7.015 1.803 -2.253 2.251 H6 SMT 40 HA1 H 0 1 N N N 5.135 10.050 7.373 3.063 1.151 -1.212 HA1 SMT 41 HA2 H 0 1 N N N 5.224 10.972 5.834 2.370 2.709 -0.700 HA2 SMT 42 HB1 H 0 1 N N N 4.076 2.877 1.093 HB1 SMT 43 HB2 H 0 1 N N N 4.768 1.320 0.580 HB2 SMT 44 HD1 H 0 1 N N N 6.541 4.088 0.747 HD1 SMT 45 HD2 H 0 1 N N N 7.234 2.530 0.234 HD2 SMT 46 HD3 H 0 1 N N N 7.458 3.979 -0.775 HD3 SMT 47 doub N N 1 sing N N 2 sing N N 3 sing N N 4 sing N N 5 sing N N 6 sing N N 7 sing N N 8 sing N N 9 sing N N 10 sing N N 11 sing N N 12 sing N N 13 sing N N 14 sing N N 15 sing N N 16 sing N N 17 sing N N 18 sing N N 19 sing N N 20 sing N N 21 sing N N 22 sing N N 23 sing N N 24 sing N N 25 sing N N 26 doub N N 27 sing N N 28 sing N N 29 sing N N 30 doub N N 31 sing N N 32 sing N N 33 doub N N 34 sing N N 35 sing N N 36 sing N N 37 sing N N 38 sing N N 39 sing N N 40 sing N N 41 sing N N 42 sing N N 43 sing N N 44 sing N N 45 sing N N 46 sing N N 47 sing N N 48 P(=O)(O)(O)OCC1OC(C(C1O)OCCSC)N2C(=O)NC(=O)C(C)=C2 InChI=1S/C13H21N2O9PS/c1-7-5-15(13(18)14-11(7)17)12-10(22-3-4-26-2)9(16)8(24-12)6-23-25(19,20)21/h5,8-10,12,16H,3-4,6H2,1-2H3,(H,14,17,18)(H2,19,20,21)/t8-,9-,10-,12-/m1/s1 JQQIRBYIPIMLTK-DNRKLUKYSA-N CSCCO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1N2C=C(C)C(=O)NC2=O CSCCO[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1N2C=C(C)C(=O)NC2=O CC1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)OCCSC CC1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)O)O)OCCSC 5-methyl-2'-O-[2-(methylsulfanyl)ethyl]uridine 5'-(dihydrogen phosphate) [(2R,3R,4R,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-4-(2-methylsulfanylethoxy)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate RCSB RCSB RCSB