data_SMW # _chem_comp.id SMW _chem_comp.name "(2S)-2-amino-3-[[[(2R,3S,4R,5R)-5-(4-amino-2-oxo-pyrimidin-1-yl)-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphoryl]oxy-[(2R)-2,3-bis[[(Z)-octadec-9-enoyl]oxy]propoxy]-dihydroxy-lambda^5-phosphanyl]oxy-propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C51 H92 N4 O18 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2~{S})-2-azanyl-3-[[[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-[(2~{R})-2,3-bis[[(~{Z})-octadec-9-enoyl]oxy]propoxy]-bis(oxidanyl)-$l^{5}-phosphanyl]oxy-propanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-25 _chem_comp.pdbx_modified_date 2021-12-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1111.240 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SMW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7B1M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SMW C10 C1 C 0 1 N N N -11.192 -2.208 37.528 -6.351 6.957 -0.181 C10 SMW 1 SMW N12 N1 N 0 1 N N N -12.557 -2.500 37.102 -5.360 6.415 0.582 N12 SMW 2 SMW C20 C2 C 0 1 N N N 6.411 -6.230 37.109 17.972 -6.166 5.745 C20 SMW 3 SMW C21 C3 C 0 1 N N N 6.109 -7.716 36.813 16.907 -5.345 5.014 C21 SMW 4 SMW C22 C4 C 0 1 N N N 4.605 -8.007 37.036 16.442 -6.106 3.770 C22 SMW 5 SMW C24 C5 C 0 1 N N N 4.642 -8.191 34.486 14.913 -6.046 1.795 C24 SMW 6 SMW C26 C6 C 0 1 N N N 3.207 -7.506 32.505 13.384 -5.986 -0.179 C26 SMW 7 SMW C28 C7 C 0 1 N N N 1.634 -6.052 31.151 11.861 -5.914 -2.136 C28 SMW 8 SMW C01 C8 C 0 1 N N N -10.012 3.802 35.945 5.016 3.050 -1.517 C01 SMW 9 SMW C03 C9 C 0 1 N N S -10.176 4.109 37.445 6.133 4.032 -1.878 C03 SMW 10 SMW C05 C10 C 0 1 N N N -11.439 3.426 37.968 7.418 3.275 -2.093 C05 SMW 11 SMW C09 C11 C 0 1 N N N -10.619 -2.912 38.720 -7.415 6.193 -0.525 C09 SMW 12 SMW C11 C12 C 0 1 N N N -11.444 -3.907 39.469 -7.464 4.854 -0.087 C11 SMW 13 SMW C14 C13 C 0 1 N N N -13.375 -3.499 37.861 -5.439 5.135 0.989 C14 SMW 14 SMW C18 C14 C 0 1 N N N -2.920 2.617 33.590 0.364 0.734 -2.225 C18 SMW 15 SMW C23 C15 C 0 1 N N N 3.805 -7.767 35.725 15.378 -5.285 3.039 C23 SMW 16 SMW C25 C16 C 0 1 N N N 4.452 -7.140 33.357 13.848 -5.225 1.064 C25 SMW 17 SMW C27 C17 C 0 1 N N N 3.099 -6.540 31.294 12.319 -5.165 -0.911 C27 SMW 18 SMW C29 C18 C 0 1 N N N 1.285 -4.809 31.519 10.585 -6.144 -2.324 C29 SMW 19 SMW C30 C19 C 0 1 N N N 2.345 -3.833 32.089 9.564 -5.515 -1.412 C30 SMW 20 SMW C31 C20 C 0 1 N N N 1.818 -2.370 31.989 8.527 -4.763 -2.250 C31 SMW 21 SMW C32 C21 C 0 1 N N N 1.823 -1.905 30.504 7.490 -4.124 -1.324 C32 SMW 22 SMW C33 C22 C 0 1 N N N 2.122 -0.380 30.441 6.454 -3.372 -2.161 C33 SMW 23 SMW C34 C23 C 0 1 N N N 0.777 0.406 30.509 5.416 -2.733 -1.235 C34 SMW 24 SMW C35 C24 C 0 1 N N N 0.770 1.326 31.771 4.380 -1.981 -2.073 C35 SMW 25 SMW C36 C25 C 0 1 N N N -0.629 2.012 31.886 3.343 -1.342 -1.147 C36 SMW 26 SMW C37 C26 C 0 1 N N N -0.627 3.027 33.073 2.322 -0.601 -1.972 C37 SMW 27 SMW C39 C27 C 0 1 N N R -3.970 3.498 34.290 -0.710 1.401 -1.364 C39 SMW 28 SMW C40 C28 C 0 1 N N N 10.156 5.234 22.464 -13.988 -13.867 1.955 C40 SMW 29 SMW C41 C29 C 0 1 N N N 9.949 6.758 22.345 -13.007 -12.873 1.330 C41 SMW 30 SMW C42 C30 C 0 1 N N N 8.646 7.043 21.555 -13.656 -11.489 1.264 C42 SMW 31 SMW C43 C31 C 0 1 N N N 7.422 6.720 22.458 -12.675 -10.495 0.639 C43 SMW 32 SMW C44 C32 C 0 1 N N N 6.627 8.026 22.755 -13.324 -9.111 0.573 C44 SMW 33 SMW C45 C33 C 0 1 N N N 6.213 8.044 24.262 -12.343 -8.116 -0.052 C45 SMW 34 SMW C46 C34 C 0 1 N N N 4.857 7.298 24.435 -12.992 -6.733 -0.117 C46 SMW 35 SMW C47 C35 C 0 1 N N N 4.327 7.481 25.896 -12.011 -5.739 -0.742 C47 SMW 36 SMW C48 C36 C 0 1 N N N 4.553 6.171 26.703 -12.650 -4.375 -0.807 C48 SMW 37 SMW C49 C37 C 0 1 N N N 4.005 6.018 27.929 -12.031 -3.337 -0.304 C49 SMW 38 SMW C50 C38 C 0 1 N N N 3.137 7.144 28.554 -10.615 -3.473 0.194 C50 SMW 39 SMW C51 C39 C 0 1 N N N 3.021 6.927 30.099 -9.739 -2.402 -0.459 C51 SMW 40 SMW C52 C40 C 0 1 N N N 1.800 7.714 30.651 -8.302 -2.539 0.046 C52 SMW 41 SMW C53 C41 C 0 1 N N N 0.532 6.808 30.611 -7.426 -1.469 -0.607 C53 SMW 42 SMW C54 C42 C 0 1 N N N -0.231 6.900 31.962 -5.989 -1.607 -0.101 C54 SMW 43 SMW C55 C43 C 0 1 N N N -1.753 6.712 31.712 -5.113 -0.536 -0.755 C55 SMW 44 SMW C56 C44 C 0 1 N N N -2.430 6.098 32.969 -3.676 -0.674 -0.249 C56 SMW 45 SMW C57 C45 C 0 1 N N N -3.485 5.053 32.519 -2.808 0.364 -0.914 C57 SMW 46 SMW C60 C46 C 0 1 N N N -5.153 2.600 34.725 -0.043 2.312 -0.331 C60 SMW 47 SMW C67 C47 C 0 1 N N R -13.151 -1.804 35.913 -4.204 7.231 0.962 C67 SMW 48 SMW C68 C48 C 0 1 N N R -13.732 -0.729 36.282 -4.165 7.443 2.497 C68 SMW 49 SMW C70 C49 C 0 1 N N S -12.773 0.527 35.765 -2.663 7.716 2.749 C70 SMW 50 SMW C71 C50 C 0 1 N N R -12.336 0.130 34.641 -1.958 7.119 1.515 C71 SMW 51 SMW C72 C51 C 0 1 N N N -11.015 0.899 34.237 -0.956 6.049 1.955 C72 SMW 52 SMW N04 N2 N 0 1 N N N -9.007 3.658 38.175 5.775 4.749 -3.109 N04 SMW 53 SMW N07 N3 N 0 1 N N N -10.888 -4.594 40.629 -8.533 4.056 -0.422 N07 SMW 54 SMW N13 N4 N 0 1 N N N -12.799 -4.195 39.042 -6.474 4.368 0.651 N13 SMW 55 SMW O02 O1 O 0 1 N N N -11.434 2.191 38.223 8.150 2.882 -1.039 O02 SMW 56 SMW O06 O2 O 0 1 N N N -12.496 4.097 38.142 7.789 3.022 -3.215 O06 SMW 57 SMW O08 O3 O 0 1 N N N -14.485 -3.737 37.518 -4.543 4.666 1.672 O08 SMW 58 SMW O15 O4 O 0 1 N N N -7.752 -0.091 32.820 0.519 3.293 1.593 O15 SMW 59 SMW O17 O5 O 0 1 N N N -6.940 3.550 35.850 3.494 2.370 0.757 O17 SMW 60 SMW O19 O6 O 0 1 N N N 0.199 3.882 33.128 2.414 -0.586 -3.176 O19 SMW 61 SMW O38 O7 O 0 1 N N N -1.621 2.917 34.098 1.310 0.041 -1.368 O38 SMW 62 SMW O58 O8 O 0 1 N N N -3.516 4.711 31.381 -3.302 1.179 -1.656 O58 SMW 63 SMW O59 O9 O 0 1 N N N -4.426 4.520 33.449 -1.486 0.382 -0.681 O59 SMW 64 SMW O61 O10 O 0 1 N N N -6.323 2.871 33.928 1.260 1.811 -0.025 O61 SMW 65 SMW O63 O11 O 0 1 N N N -8.456 2.266 33.696 1.516 4.171 -0.553 O63 SMW 66 SMW O64 O12 O 0 1 N N N -8.106 4.971 34.051 2.621 1.839 -2.041 O64 SMW 67 SMW O65 O13 O 0 1 N N N -7.504 0.379 35.233 2.178 5.186 1.780 O65 SMW 68 SMW O66 O14 O 0 1 N N N -9.896 0.005 34.288 -0.237 5.572 0.816 O66 SMW 69 SMW O69 O15 O 0 1 N N N -12.043 -1.376 34.901 -2.974 6.526 0.688 O69 SMW 70 SMW O73 O16 O 0 1 N N N -15.048 -0.640 35.654 -4.960 8.568 2.876 O73 SMW 71 SMW O74 O17 O 0 1 N N N -13.568 1.747 35.616 -2.418 9.121 2.836 O74 SMW 72 SMW O75 O18 O 0 1 N N N -8.889 2.961 35.735 3.827 3.776 -1.199 O75 SMW 73 SMW P16 P1 P 0 1 N N N -8.365 0.618 34.012 0.984 4.528 0.923 P16 SMW 74 SMW P62 P2 P 0 1 N N N -7.740 3.465 34.632 2.544 2.793 -0.612 P62 SMW 75 SMW H1 H1 H 0 1 N N N -10.597 -1.487 36.986 -6.290 7.986 -0.504 H1 SMW 76 SMW H2 H2 H 0 1 N N N 7.481 -6.034 36.948 18.821 -6.332 5.082 H2 SMW 77 SMW H3 H3 H 0 1 N N N 5.816 -5.594 36.437 18.303 -5.624 6.631 H3 SMW 78 SMW H4 H4 H 0 1 N N N 6.150 -6.004 38.153 17.550 -7.126 6.042 H4 SMW 79 SMW H5 H5 H 0 1 N N N 6.706 -8.350 37.485 16.058 -5.179 5.676 H5 SMW 80 SMW H6 H6 H 0 1 N N N 6.372 -7.940 35.769 17.329 -4.385 4.716 H6 SMW 81 SMW H7 H7 H 0 1 N N N 4.220 -7.341 37.822 17.292 -6.272 3.107 H7 SMW 82 SMW H8 H8 H 0 1 N N N 4.481 -9.054 37.349 16.020 -7.066 4.068 H8 SMW 83 SMW H9 H9 H 0 1 N N N 4.303 -9.176 34.133 15.762 -6.212 1.133 H9 SMW 84 SMW H10 H10 H 0 1 N N N 5.705 -8.246 34.762 14.491 -7.006 2.093 H10 SMW 85 SMW H11 H11 H 0 1 N N N 2.302 -7.419 33.124 14.233 -6.152 -0.842 H11 SMW 86 SMW H12 H12 H 0 1 N N N 3.304 -8.539 32.141 12.962 -6.946 0.118 H12 SMW 87 SMW H13 H13 H 0 1 N N N 0.886 -6.720 30.751 12.585 -6.262 -2.858 H13 SMW 88 SMW H14 H14 H 0 1 N N N -9.868 4.744 35.395 4.825 2.391 -2.364 H14 SMW 89 SMW H15 H15 H 0 1 N N N -10.917 3.297 35.577 5.320 2.455 -0.656 H15 SMW 90 SMW H16 H16 H 0 1 N N N -10.290 5.196 37.567 6.264 4.747 -1.066 H16 SMW 91 SMW H17 H17 H 0 1 N N N -9.609 -2.700 39.038 -8.213 6.604 -1.126 H17 SMW 92 SMW H18 H18 H 0 1 N N N -2.943 2.812 32.508 -0.105 0.019 -2.901 H18 SMW 93 SMW H19 H19 H 0 1 N N N -3.149 1.557 33.777 0.888 1.493 -2.806 H19 SMW 94 SMW H20 H20 H 0 1 N N N 3.556 -6.699 35.644 14.529 -5.119 3.702 H20 SMW 95 SMW H21 H21 H 0 1 N N N 2.878 -8.358 35.754 15.800 -4.326 2.741 H21 SMW 96 SMW H22 H22 H 0 1 N N N 5.344 -7.129 32.714 12.999 -5.059 1.727 H22 SMW 97 SMW H23 H23 H 0 1 N N N 4.309 -6.145 33.804 14.270 -4.266 0.766 H23 SMW 98 SMW H24 H24 H 0 1 N N N 3.401 -7.067 30.377 11.470 -4.999 -0.248 H24 SMW 99 SMW H25 H25 H 0 1 N N N 3.759 -5.675 31.455 12.741 -4.205 -1.208 H25 SMW 100 SMW H26 H26 H 0 1 N N N 0.259 -4.487 31.417 10.266 -6.785 -3.133 H26 SMW 101 SMW H27 H27 H 0 1 N N N 2.541 -4.080 33.143 9.067 -6.292 -0.832 H27 SMW 102 SMW H28 H28 H 0 1 N N N 3.276 -3.927 31.511 10.060 -4.818 -0.737 H28 SMW 103 SMW H29 H29 H 0 1 N N N 2.467 -1.707 32.581 9.024 -3.985 -2.830 H29 SMW 104 SMW H30 H30 H 0 1 N N N 0.792 -2.325 32.382 8.031 -5.460 -2.925 H30 SMW 105 SMW H31 H31 H 0 1 N N N 0.840 -2.105 30.054 6.993 -4.902 -0.743 H31 SMW 106 SMW H32 H32 H 0 1 N N N 2.599 -2.454 29.950 7.986 -3.427 -0.648 H32 SMW 107 SMW H33 H33 H 0 1 N N N 2.759 -0.094 31.291 6.950 -2.594 -2.741 H33 SMW 108 SMW H34 H34 H 0 1 N N N 2.639 -0.144 29.499 5.957 -4.069 -2.837 H34 SMW 109 SMW H35 H35 H 0 1 N N N 0.668 1.024 29.605 4.920 -3.511 -0.655 H35 SMW 110 SMW H36 H36 H 0 1 N N N -0.060 -0.305 30.570 5.912 -2.036 -0.560 H36 SMW 111 SMW H37 H37 H 0 1 N N N 0.960 0.722 32.670 4.877 -1.204 -2.653 H37 SMW 112 SMW H38 H38 H 0 1 N N N 1.551 2.094 31.673 3.884 -2.678 -2.748 H38 SMW 113 SMW H39 H39 H 0 1 N N N -0.852 2.546 30.950 2.846 -2.120 -0.567 H39 SMW 114 SMW H40 H40 H 0 1 N N N -1.398 1.245 32.063 3.839 -0.645 -0.471 H40 SMW 115 SMW H41 H41 H 0 1 N N N -3.514 3.926 35.195 -1.368 1.994 -2.000 H41 SMW 116 SMW H42 H42 H 0 1 N N N 11.081 5.032 23.025 -14.247 -13.538 2.961 H42 SMW 117 SMW H43 H43 H 0 1 N N N 9.301 4.788 22.994 -14.891 -13.917 1.346 H43 SMW 118 SMW H44 H44 H 0 1 N N N 10.234 4.795 21.458 -13.526 -14.853 2.001 H44 SMW 119 SMW H45 H45 H 0 1 N N N 10.804 7.204 21.815 -12.104 -12.822 1.938 H45 SMW 120 SMW H46 H46 H 0 1 N N N 9.871 7.197 23.351 -12.749 -13.201 0.323 H46 SMW 121 SMW H47 H47 H 0 1 N N N 8.618 8.103 21.261 -14.559 -11.539 0.655 H47 SMW 122 SMW H48 H48 H 0 1 N N N 8.616 6.412 20.654 -13.915 -11.160 2.271 H48 SMW 123 SMW H49 H49 H 0 1 N N N 6.767 6.003 21.942 -11.772 -10.444 1.247 H49 SMW 124 SMW H50 H50 H 0 1 N N N 7.772 6.282 23.404 -12.417 -10.823 -0.368 H50 SMW 125 SMW H51 H51 H 0 1 N N N 7.259 8.899 22.537 -14.227 -9.161 -0.035 H51 SMW 126 SMW H52 H52 H 0 1 N N N 5.726 8.059 22.125 -13.583 -8.782 1.580 H52 SMW 127 SMW H53 H53 H 0 1 N N N 6.987 7.542 24.861 -11.440 -8.066 0.557 H53 SMW 128 SMW H54 H54 H 0 1 N N N 6.105 9.085 24.600 -12.085 -8.445 -1.058 H54 SMW 129 SMW H55 H55 H 0 1 N N N 4.122 7.709 23.727 -13.895 -6.783 -0.726 H55 SMW 130 SMW H56 H56 H 0 1 N N N 5.002 6.227 24.232 -13.250 -6.404 0.889 H56 SMW 131 SMW H57 H57 H 0 1 N N N 4.868 8.307 26.381 -11.108 -5.688 -0.134 H57 SMW 132 SMW H58 H58 H 0 1 N N N 3.252 7.713 25.869 -11.753 -6.067 -1.749 H58 SMW 133 SMW H59 H59 H 0 1 N N N 5.152 5.378 26.281 -13.619 -4.255 -1.268 H59 SMW 134 SMW H60 H60 H 0 1 N N N 4.172 5.104 28.479 -12.534 -2.383 -0.246 H60 SMW 135 SMW H61 H61 H 0 1 N N N 3.606 8.119 28.356 -10.597 -3.346 1.277 H61 SMW 136 SMW H62 H62 H 0 1 N N N 2.133 7.123 28.106 -10.233 -4.461 -0.062 H62 SMW 137 SMW H63 H63 H 0 1 N N N 2.890 5.855 30.308 -9.757 -2.529 -1.542 H63 SMW 138 SMW H64 H64 H 0 1 N N N 3.938 7.286 30.588 -10.121 -1.413 -0.203 H64 SMW 139 SMW H65 H65 H 0 1 N N N 2.000 8.019 31.689 -8.284 -2.413 1.129 H65 SMW 140 SMW H66 H66 H 0 1 N N N 1.631 8.608 30.033 -7.920 -3.528 -0.210 H66 SMW 141 SMW H67 H67 H 0 1 N N N -0.128 7.141 29.797 -7.444 -1.596 -1.690 H67 SMW 142 SMW H68 H68 H 0 1 N N N 0.835 5.765 30.434 -7.808 -0.481 -0.351 H68 SMW 143 SMW H69 H69 H 0 1 N N N 0.129 6.113 32.641 -5.971 -1.480 0.981 H69 SMW 144 SMW H70 H70 H 0 1 N N N -0.053 7.886 32.417 -5.607 -2.595 -0.358 H70 SMW 145 SMW H71 H71 H 0 1 N N N -2.209 7.689 31.494 -5.131 -0.663 -1.838 H71 SMW 146 SMW H72 H72 H 0 1 N N N -1.900 6.039 30.854 -5.495 0.452 -0.499 H72 SMW 147 SMW H73 H73 H 0 1 N N N -1.669 5.608 33.594 -3.655 -0.527 0.831 H73 SMW 148 SMW H74 H74 H 0 1 N N N -2.923 6.893 33.547 -3.300 -1.669 -0.489 H74 SMW 149 SMW H75 H75 H 0 1 N N N -5.384 2.796 35.783 0.042 3.320 -0.737 H75 SMW 150 SMW H76 H76 H 0 1 N N N -4.869 1.545 34.601 -0.646 2.335 0.576 H76 SMW 151 SMW H77 H77 H 0 1 N N N -13.835 -2.496 35.400 -4.224 8.189 0.442 H77 SMW 152 SMW H78 H78 H 0 1 N N N -13.829 -0.644 37.374 -4.491 6.545 3.022 H78 SMW 153 SMW H79 H79 H 0 1 N N N -11.983 0.677 36.515 -2.331 7.214 3.658 H79 SMW 154 SMW H80 H80 H 0 1 N N N -13.066 0.221 33.823 -1.444 7.906 0.964 H80 SMW 155 SMW H81 H81 H 0 1 N N N -10.849 1.732 34.937 -0.257 6.479 2.672 H81 SMW 156 SMW H82 H82 H 0 1 N N N -11.120 1.294 33.216 -1.490 5.221 2.421 H82 SMW 157 SMW H83 H83 H 0 1 N N N -9.122 3.861 39.147 6.465 5.450 -3.333 H83 SMW 158 SMW H84 H84 H 0 1 N N N -8.897 2.672 38.051 5.647 4.108 -3.877 H84 SMW 159 SMW H86 H86 H 0 1 N N N -11.441 -5.262 41.127 -9.255 4.414 -0.962 H86 SMW 160 SMW H87 H87 H 0 1 N N N -9.954 -4.398 40.926 -8.565 3.135 -0.119 H87 SMW 161 SMW H88 H88 H 0 1 N N N -12.293 1.928 38.532 8.967 2.400 -1.227 H88 SMW 162 SMW H89 H89 H 0 1 N N N -6.739 4.460 36.034 4.366 2.787 0.775 H89 SMW 163 SMW H90 H90 H 0 1 N N N -7.691 5.630 34.595 3.204 2.199 -2.724 H90 SMW 164 SMW H91 H91 H 0 1 N N N -6.762 -0.164 34.996 2.532 6.001 1.399 H91 SMW 165 SMW H92 H92 H 0 1 N N N -15.591 -1.360 35.953 -4.967 8.742 3.827 H92 SMW 166 SMW H93 H93 H 0 1 N N N -13.884 2.025 36.467 -2.884 9.557 3.562 H93 SMW 167 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SMW C42 C41 SING N N 1 SMW C42 C43 SING N N 2 SMW C41 C40 SING N N 3 SMW C43 C44 SING N N 4 SMW C44 C45 SING N N 5 SMW C45 C46 SING N N 6 SMW C46 C47 SING N N 7 SMW C47 C48 SING N N 8 SMW C48 C49 DOUB N Z 9 SMW C49 C50 SING N N 10 SMW C50 C51 SING N N 11 SMW C51 C52 SING N N 12 SMW C33 C32 SING N N 13 SMW C33 C34 SING N N 14 SMW C32 C31 SING N N 15 SMW C34 C35 SING N N 16 SMW C53 C52 SING N N 17 SMW C53 C54 SING N N 18 SMW C28 C27 SING N N 19 SMW C28 C29 DOUB N Z 20 SMW C27 C26 SING N N 21 SMW O58 C57 DOUB N N 22 SMW C29 C30 SING N N 23 SMW C55 C54 SING N N 24 SMW C55 C56 SING N N 25 SMW C35 C36 SING N N 26 SMW C36 C37 SING N N 27 SMW C31 C30 SING N N 28 SMW C26 C25 SING N N 29 SMW C57 C56 SING N N 30 SMW C57 O59 SING N N 31 SMW O15 P16 DOUB N N 32 SMW C37 O19 DOUB N N 33 SMW C37 O38 SING N N 34 SMW C25 C24 SING N N 35 SMW O59 C39 SING N N 36 SMW C18 O38 SING N N 37 SMW C18 C39 SING N N 38 SMW O63 P16 SING N N 39 SMW O63 P62 SING N N 40 SMW O61 P62 SING N N 41 SMW O61 C60 SING N N 42 SMW P16 O66 SING N N 43 SMW P16 O65 SING N N 44 SMW O64 P62 SING N N 45 SMW C72 O66 SING N N 46 SMW C72 C71 SING N N 47 SMW C39 C60 SING N N 48 SMW C24 C23 SING N N 49 SMW P62 O75 SING N N 50 SMW P62 O17 SING N N 51 SMW C71 O69 SING N N 52 SMW C71 C70 SING N N 53 SMW O69 C67 SING N N 54 SMW O74 C70 SING N N 55 SMW O73 C68 SING N N 56 SMW C23 C22 SING N N 57 SMW O75 C01 SING N N 58 SMW C70 C68 SING N N 59 SMW C67 C68 SING N N 60 SMW C67 N12 SING N N 61 SMW C01 C03 SING N N 62 SMW C21 C22 SING N N 63 SMW C21 C20 SING N N 64 SMW N12 C10 SING N N 65 SMW N12 C14 SING N N 66 SMW C03 C05 SING N N 67 SMW C03 N04 SING N N 68 SMW O08 C14 DOUB N N 69 SMW C10 C09 DOUB N N 70 SMW C14 N13 SING N N 71 SMW C05 O06 DOUB N N 72 SMW C05 O02 SING N N 73 SMW C09 C11 SING N N 74 SMW N13 C11 DOUB N N 75 SMW C11 N07 SING N N 76 SMW C10 H1 SING N N 77 SMW C20 H2 SING N N 78 SMW C20 H3 SING N N 79 SMW C20 H4 SING N N 80 SMW C21 H5 SING N N 81 SMW C21 H6 SING N N 82 SMW C22 H7 SING N N 83 SMW C22 H8 SING N N 84 SMW C24 H9 SING N N 85 SMW C24 H10 SING N N 86 SMW C26 H11 SING N N 87 SMW C26 H12 SING N N 88 SMW C28 H13 SING N N 89 SMW C01 H14 SING N N 90 SMW C01 H15 SING N N 91 SMW C03 H16 SING N N 92 SMW C09 H17 SING N N 93 SMW C18 H18 SING N N 94 SMW C18 H19 SING N N 95 SMW C23 H20 SING N N 96 SMW C23 H21 SING N N 97 SMW C25 H22 SING N N 98 SMW C25 H23 SING N N 99 SMW C27 H24 SING N N 100 SMW C27 H25 SING N N 101 SMW C29 H26 SING N N 102 SMW C30 H27 SING N N 103 SMW C30 H28 SING N N 104 SMW C31 H29 SING N N 105 SMW C31 H30 SING N N 106 SMW C32 H31 SING N N 107 SMW C32 H32 SING N N 108 SMW C33 H33 SING N N 109 SMW C33 H34 SING N N 110 SMW C34 H35 SING N N 111 SMW C34 H36 SING N N 112 SMW C35 H37 SING N N 113 SMW C35 H38 SING N N 114 SMW C36 H39 SING N N 115 SMW C36 H40 SING N N 116 SMW C39 H41 SING N N 117 SMW C40 H42 SING N N 118 SMW C40 H43 SING N N 119 SMW C40 H44 SING N N 120 SMW C41 H45 SING N N 121 SMW C41 H46 SING N N 122 SMW C42 H47 SING N N 123 SMW C42 H48 SING N N 124 SMW C43 H49 SING N N 125 SMW C43 H50 SING N N 126 SMW C44 H51 SING N N 127 SMW C44 H52 SING N N 128 SMW C45 H53 SING N N 129 SMW C45 H54 SING N N 130 SMW C46 H55 SING N N 131 SMW C46 H56 SING N N 132 SMW C47 H57 SING N N 133 SMW C47 H58 SING N N 134 SMW C48 H59 SING N N 135 SMW C49 H60 SING N N 136 SMW C50 H61 SING N N 137 SMW C50 H62 SING N N 138 SMW C51 H63 SING N N 139 SMW C51 H64 SING N N 140 SMW C52 H65 SING N N 141 SMW C52 H66 SING N N 142 SMW C53 H67 SING N N 143 SMW C53 H68 SING N N 144 SMW C54 H69 SING N N 145 SMW C54 H70 SING N N 146 SMW C55 H71 SING N N 147 SMW C55 H72 SING N N 148 SMW C56 H73 SING N N 149 SMW C56 H74 SING N N 150 SMW C60 H75 SING N N 151 SMW C60 H76 SING N N 152 SMW C67 H77 SING N N 153 SMW C68 H78 SING N N 154 SMW C70 H79 SING N N 155 SMW C71 H80 SING N N 156 SMW C72 H81 SING N N 157 SMW C72 H82 SING N N 158 SMW N04 H83 SING N N 159 SMW N04 H84 SING N N 160 SMW N07 H86 SING N N 161 SMW N07 H87 SING N N 162 SMW O02 H88 SING N N 163 SMW O17 H89 SING N N 164 SMW O64 H90 SING N N 165 SMW O65 H91 SING N N 166 SMW O73 H92 SING N N 167 SMW O74 H93 SING N N 168 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SMW InChI InChI 1.03 "InChI=1S/C51H92N4O18P2/c1-3-5-7-9-11-13-15-17-19-21-23-25-27-29-31-33-45(56)67-37-41(71-46(57)34-32-30-28-26-24-22-20-18-16-14-12-10-8-6-4-2)38-69-75(65,66,70-39-42(52)50(60)61)73-74(63,64)68-40-43-47(58)48(59)49(72-43)55-36-35-44(53)54-51(55)62/h17-20,35-36,41-43,47-49,58-59,65-66H,3-16,21-34,37-40,52H2,1-2H3,(H,60,61)(H,63,64)(H2,53,54,62)/b19-17-,20-18-/t41-,42+,43-,47-,48-,49-/m1/s1" SMW InChIKey InChI 1.03 SMGJVPWANUHLFX-OTXLWCCGSA-N SMW SMILES_CANONICAL CACTVS 3.385 "CCCCCCCC\C=C/CCCCCCCC(=O)OC[C@H](CO[P](O)(O)(OC[C@H](N)C(O)=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)N2C=CC(=NC2=O)N)OC(=O)CCCCCCC\C=C/CCCCCCCC" SMW SMILES CACTVS 3.385 "CCCCCCCCC=CCCCCCCCC(=O)OC[CH](CO[P](O)(O)(OC[CH](N)C(O)=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)N2C=CC(=NC2=O)N)OC(=O)CCCCCCCC=CCCCCCCCC" SMW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCC/C=C\CCCCCCCC(=O)OC[C@H](COP(O)(O)(OC[C@@H](C(=O)O)N)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)N2C=CC(=NC2=O)N)O)O)OC(=O)CCCCCCC/C=C\CCCCCCCC" SMW SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCC=CCCCCCCCC(=O)OCC(COP(O)(O)(OCC(C(=O)O)N)OP(=O)(O)OCC1C(C(C(O1)N2C=CC(=NC2=O)N)O)O)OC(=O)CCCCCCCC=CCCCCCCCC" # _pdbx_chem_comp_identifier.comp_id SMW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-azanyl-3-[[[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-[(2~{R})-2,3-bis[[(~{Z})-octadec-9-enoyl]oxy]propoxy]-bis(oxidanyl)-$l^{5}-phosphanyl]oxy-propanoic acid" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id SMW _pdbx_chem_comp_synonyms.name "(2~{S})-2-azanyl-3-[[[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-[(2~{R})-2,3-bis[[(~{Z})-octadec-9-enoyl]oxy]propoxy]-bis(oxidanyl)-$l^{5}-phosphanyl]oxy-propanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SMW "Create component" 2020-11-25 PDBE SMW "Modify synonyms" 2021-09-17 PDBE SMW "Initial release" 2021-12-08 RCSB ##