data_SO0 # _chem_comp.id SO0 _chem_comp.name "(1S,3aR,6aS)-2-[(2,4-dichlorophenoxy)acetyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}octahydrocyclopenta[c]pyrrole-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H29 Cl2 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-28 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 498.399 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SO0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8TY4 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SO0 C1 C1 C 0 1 N N N N N N -6.095 -14.263 -18.084 1.408 -5.059 0.262 C1 SO0 1 SO0 C10 C2 C 0 1 N N N N N N -6.266 -13.084 -17.122 1.822 -4.810 1.725 C10 SO0 2 SO0 C11 C3 C 0 1 N N N N N N -9.478 -17.668 -18.747 -2.012 -0.804 0.137 C11 SO0 3 SO0 C12 C4 C 0 1 N N N N N N -9.719 -16.412 -17.950 -0.538 -0.526 0.280 C12 SO0 4 SO0 C13 C5 C 0 1 N N N N N N -7.892 -15.450 -19.328 0.001 -2.975 0.175 C13 SO0 5 SO0 C14 C6 C 0 1 N N S N N N -9.140 -14.044 -17.764 1.799 -1.418 0.427 C14 SO0 6 SO0 C15 C7 C 0 1 N N N N N N -10.544 -13.545 -17.931 2.344 -0.567 -0.691 C15 SO0 7 SO0 C16 C8 C 0 1 N N R N N N -7.177 -14.128 -19.147 1.280 -3.654 -0.361 C16 SO0 8 SO0 C17 C9 C 0 1 N N S N N N -12.458 -12.453 -16.911 4.095 0.819 -1.666 C17 SO0 9 SO0 C19 C10 C 0 1 N N N N N N -13.347 -13.246 -15.932 5.125 1.801 -1.104 C19 SO0 10 SO0 C2 C11 C 0 1 N N N N N N -7.429 -12.250 -17.656 2.473 -3.419 1.770 C2 SO0 11 SO0 C20 C12 C 0 1 N N S N N N -13.516 -14.696 -16.391 4.432 2.778 -0.152 C20 SO0 12 SO0 C21 C13 C 0 1 N N N N N N -14.335 -14.840 -17.676 5.448 3.801 0.407 C21 SO0 13 SO0 C22 C14 C 0 1 N N N N N N -15.150 -16.120 -17.471 5.872 3.132 1.733 C22 SO0 14 SO0 C24 C15 C 0 1 N N N N N N -14.278 -15.541 -15.406 3.925 2.052 1.074 C24 SO0 15 SO0 C3 C16 C 0 1 Y N N N N N -11.676 -18.950 -18.780 -4.085 0.356 0.030 C3 SO0 16 SO0 C34 C17 C 0 1 N N S N N N -8.195 -13.176 -18.575 2.402 -2.835 0.347 C34 SO0 17 SO0 C4 C18 C 0 1 Y N N N N N -12.198 -20.164 -18.324 -4.704 -0.878 -0.099 C4 SO0 18 SO0 C5 C19 C 0 1 Y N N N N N -13.483 -20.550 -18.633 -6.079 -0.951 -0.222 C5 SO0 19 SO0 C6 C20 C 0 1 Y N N N N N -14.289 -19.732 -19.419 -6.838 0.206 -0.217 C6 SO0 20 SO0 C7 C21 C 0 1 Y N N N N N -13.792 -18.525 -19.882 -6.222 1.439 -0.088 C7 SO0 21 SO0 C8 C22 C 0 1 N N N N N N -12.411 -10.968 -16.533 4.762 -0.078 -2.711 C8 SO0 22 SO0 C9 C23 C 0 1 Y N N N N N -12.498 -18.126 -19.566 -4.849 1.516 0.041 C9 SO0 23 SO0 N13 N1 N 0 1 N N N N N N -8.960 -15.383 -18.327 0.342 -1.546 0.293 N13 SO0 24 SO0 N16 N2 N 0 1 N N N N N N -11.091 -12.959 -16.875 3.565 -0.009 -0.579 N16 SO0 25 SO0 N23 N3 N 0 1 N N N N N N -15.140 -16.344 -16.032 4.746 2.272 2.115 N23 SO0 26 SO0 O1 O1 O 0 1 N N N N N N -10.375 -18.717 -18.378 -2.733 0.430 0.150 O1 SO0 27 SO0 O26 O2 O 0 1 N N N N N N -14.098 -15.481 -14.203 2.922 1.371 1.113 O26 SO0 28 SO0 O33 O3 O 0 1 N N N N N N -10.546 -16.364 -17.049 -0.144 0.616 0.384 O33 SO0 29 SO0 O38 O4 O 0 1 N N N N N N -11.130 -13.692 -18.994 1.683 -0.384 -1.691 O38 SO0 30 SO0 O9 O5 O 0 1 N N N N N N -13.695 -10.337 -16.697 5.902 -0.717 -2.132 O9 SO0 31 SO0 CL1 CL1 CL 0 0 N N N N N N -12.065 -16.533 -20.263 -4.077 3.063 0.203 CL1 SO0 32 SO0 CL2 CL2 CL 0 0 N N N N N N -15.975 -20.231 -19.835 -8.564 0.111 -0.372 CL2 SO0 33 SO0 H1 H1 H 0 1 N N N N N N -6.213 -15.213 -17.542 2.176 -5.634 -0.256 H1 SO0 34 SO0 H2 H2 H 0 1 N N N N N N -5.100 -14.229 -18.551 0.453 -5.582 0.222 H2 SO0 35 SO0 H3 H3 H 0 1 N N N N N N -6.495 -13.450 -16.110 0.943 -4.832 2.369 H3 SO0 36 SO0 H4 H4 H 0 1 N N N N N N -5.347 -12.480 -17.095 2.537 -5.568 2.044 H4 SO0 37 SO0 H5 H5 H 0 1 N N N N N N -8.446 -18.006 -18.573 -2.194 -1.320 -0.806 H5 SO0 38 SO0 H6 H6 H 0 1 N N N N N N -9.615 -17.443 -19.815 -2.346 -1.429 0.964 H6 SO0 39 SO0 H7 H7 H 0 1 N N N N N N -8.306 -15.541 -20.343 -0.822 -3.110 -0.526 H7 SO0 40 SO0 H8 H8 H 0 1 N N N N N N -7.217 -16.296 -19.131 -0.262 -3.382 1.151 H8 SO0 41 SO0 H9 H9 H 0 1 N N N N N N -8.852 -14.025 -16.703 2.043 -0.966 1.388 H9 SO0 42 SO0 H10 H10 H 0 1 N N N N N N -6.764 -13.758 -20.097 1.351 -3.644 -1.449 H10 SO0 43 SO0 H11 H11 H 0 1 N N N N N N -12.870 -12.552 -17.926 3.280 1.374 -2.130 H11 SO0 44 SO0 H12 H12 H 0 1 N N N N N N -12.881 -13.237 -14.936 5.894 1.250 -0.563 H12 SO0 45 SO0 H13 H13 H 0 1 N N N N N N -14.337 -12.769 -15.878 5.584 2.355 -1.923 H13 SO0 46 SO0 H14 H14 H 0 1 N N N N N N -7.054 -11.378 -18.212 1.928 -2.777 2.462 H14 SO0 47 SO0 H15 H15 H 0 1 N N N N N N -8.071 -11.910 -16.830 3.512 -3.507 2.086 H15 SO0 48 SO0 H16 H16 H 0 1 N N N N N N -12.521 -15.137 -16.552 3.614 3.288 -0.660 H16 SO0 49 SO0 H17 H17 H 0 1 N N N N N N -13.674 -14.936 -18.550 6.300 3.911 -0.264 H17 SO0 50 SO0 H18 H18 H 0 1 N N N N N N -14.999 -13.974 -17.813 4.971 4.764 0.590 H18 SO0 51 SO0 H19 H19 H 0 1 N N N N N N -16.179 -15.986 -17.835 6.771 2.533 1.583 H19 SO0 52 SO0 H20 H20 H 0 1 N N N N N N -14.682 -16.965 -17.998 6.046 3.889 2.498 H20 SO0 53 SO0 H21 H21 H 0 1 N N N N N N -8.726 -12.622 -19.363 3.354 -2.863 -0.183 H21 SO0 54 SO0 H22 H22 H 0 1 N N N N N N -11.582 -20.811 -17.718 -4.113 -1.781 -0.105 H22 SO0 55 SO0 H23 H23 H 0 1 N N N N N N -13.866 -21.490 -18.264 -6.561 -1.912 -0.323 H23 SO0 56 SO0 H24 H24 H 0 1 N N N N N N -14.415 -17.889 -20.493 -6.817 2.340 -0.079 H24 SO0 57 SO0 H25 H25 H 0 1 N N N N N N -12.101 -10.877 -15.482 4.052 -0.834 -3.046 H25 SO0 58 SO0 H26 H26 H 0 1 N N N N N N -11.679 -10.459 -17.177 5.077 0.527 -3.561 H26 SO0 59 SO0 H27 H27 H 0 1 N N N N N N -10.555 -12.862 -16.036 4.094 -0.154 0.221 H27 SO0 60 SO0 H28 H28 H 0 1 N N N N N N -15.712 -17.020 -15.568 4.612 1.909 3.005 H28 SO0 61 SO0 H29 H29 H 0 1 N N N N N N -13.631 -9.421 -16.455 6.375 -1.302 -2.740 H29 SO0 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SO0 CL1 C9 SING N N 1 SO0 C7 C9 DOUB Y N 2 SO0 C7 C6 SING Y N 3 SO0 CL2 C6 SING N N 4 SO0 C9 C3 SING Y N 5 SO0 C6 C5 DOUB Y N 6 SO0 C13 C16 SING N N 7 SO0 C13 N13 SING N N 8 SO0 C16 C34 SING N N 9 SO0 C16 C1 SING N N 10 SO0 O38 C15 DOUB N N 11 SO0 C3 O1 SING N N 12 SO0 C3 C4 DOUB Y N 13 SO0 C11 O1 SING N N 14 SO0 C11 C12 SING N N 15 SO0 C5 C4 SING Y N 16 SO0 C34 C14 SING N N 17 SO0 C34 C2 SING N N 18 SO0 N13 C12 SING N N 19 SO0 N13 C14 SING N N 20 SO0 C1 C10 SING N N 21 SO0 C12 O33 DOUB N N 22 SO0 C15 C14 SING N N 23 SO0 C15 N16 SING N N 24 SO0 C21 C22 SING N N 25 SO0 C21 C20 SING N N 26 SO0 C2 C10 SING N N 27 SO0 C22 N23 SING N N 28 SO0 C17 N16 SING N N 29 SO0 C17 C8 SING N N 30 SO0 C17 C19 SING N N 31 SO0 O9 C8 SING N N 32 SO0 C20 C19 SING N N 33 SO0 C20 C24 SING N N 34 SO0 N23 C24 SING N N 35 SO0 C24 O26 DOUB N N 36 SO0 C1 H1 SING N N 37 SO0 C1 H2 SING N N 38 SO0 C10 H3 SING N N 39 SO0 C10 H4 SING N N 40 SO0 C11 H5 SING N N 41 SO0 C11 H6 SING N N 42 SO0 C13 H7 SING N N 43 SO0 C13 H8 SING N N 44 SO0 C14 H9 SING N N 45 SO0 C16 H10 SING N N 46 SO0 C17 H11 SING N N 47 SO0 C19 H12 SING N N 48 SO0 C19 H13 SING N N 49 SO0 C2 H14 SING N N 50 SO0 C2 H15 SING N N 51 SO0 C20 H16 SING N N 52 SO0 C21 H17 SING N N 53 SO0 C21 H18 SING N N 54 SO0 C22 H19 SING N N 55 SO0 C22 H20 SING N N 56 SO0 C34 H21 SING N N 57 SO0 C4 H22 SING N N 58 SO0 C5 H23 SING N N 59 SO0 C7 H24 SING N N 60 SO0 C8 H25 SING N N 61 SO0 C8 H26 SING N N 62 SO0 N16 H27 SING N N 63 SO0 N23 H28 SING N N 64 SO0 O9 H29 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SO0 SMILES ACDLabs 12.01 "O=C1NCCC1CC(CO)NC(=O)C1C2CCCC2CN1C(=O)COc1ccc(Cl)cc1Cl" SO0 InChI InChI 1.06 "InChI=1S/C23H29Cl2N3O5/c24-15-4-5-19(18(25)9-15)33-12-20(30)28-10-14-2-1-3-17(14)21(28)23(32)27-16(11-29)8-13-6-7-26-22(13)31/h4-5,9,13-14,16-17,21,29H,1-3,6-8,10-12H2,(H,26,31)(H,27,32)/t13-,14-,16-,17-,21-/m0/s1" SO0 InChIKey InChI 1.06 WFNOKGZUZOGKBO-ZEAPZOAHSA-N SO0 SMILES_CANONICAL CACTVS 3.385 "OC[C@H](C[C@@H]1CCNC1=O)NC(=O)[C@@H]2[C@H]3CCC[C@H]3CN2C(=O)COc4ccc(Cl)cc4Cl" SO0 SMILES CACTVS 3.385 "OC[CH](C[CH]1CCNC1=O)NC(=O)[CH]2[CH]3CCC[CH]3CN2C(=O)COc4ccc(Cl)cc4Cl" SO0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1Cl)Cl)OCC(=O)N2C[C@@H]3CCC[C@@H]3[C@H]2C(=O)N[C@@H](C[C@@H]4CCNC4=O)CO" SO0 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1Cl)Cl)OCC(=O)N2CC3CCCC3C2C(=O)NC(CC4CCNC4=O)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SO0 "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,3aR,6aS)-2-[(2,4-dichlorophenoxy)acetyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}octahydrocyclopenta[c]pyrrole-1-carboxamide" SO0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S},3~{a}~{S},6~{a}~{R})-2-[2-[2,4-bis(chloranyl)phenoxy]ethanoyl]-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3,3~{a},4,5,6,6~{a}-hexahydro-1~{H}-cyclopenta[c]pyrrole-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SO0 "Create component" 2023-08-28 RCSB SO0 "Initial release" 2024-08-28 RCSB #