data_SOE # _chem_comp.id SOE _chem_comp.name alpha-L-sorbopyranose _chem_comp.type "L-saccharide, alpha linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H12 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "alpha-L-sorbose; L-sorbose; sorbose; L-sorbose in pyranose form" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-05-14 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 180.156 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SOE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3AI3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 SOE alpha-L-sorbose PDB ? 2 SOE L-sorbose PDB ? 3 SOE sorbose PDB ? 4 SOE "L-sorbose in pyranose form" PDB ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SOE C1 C1 C 0 1 N N N 41.316 115.458 97.979 -2.402 -0.343 0.559 C1 SOE 1 SOE O1 O1 O 0 1 N N N 41.377 116.707 98.665 -3.372 0.636 0.182 O1 SOE 2 SOE C2 C2 C 0 1 N N R 39.915 115.276 97.402 -1.041 0.035 -0.029 C2 SOE 3 SOE O2 O2 O 0 1 N Y N 39.920 114.028 96.693 -1.136 0.087 -1.454 O2 SOE 4 SOE C3 C3 C 0 1 N N S 39.542 116.421 96.454 -0.001 -1.014 0.375 C3 SOE 5 SOE O3 O3 O 0 1 N N N 40.433 116.489 95.324 -0.365 -2.283 -0.172 O3 SOE 6 SOE C4 C4 C 0 1 N N R 38.098 116.274 95.977 1.370 -0.598 -0.167 C4 SOE 7 SOE O4 O4 O 0 1 N N N 37.729 117.404 95.182 2.359 -1.532 0.268 O4 SOE 8 SOE C5 C5 C 0 1 N N S 37.147 116.146 97.169 1.714 0.797 0.365 C5 SOE 9 SOE O5 O5 O 0 1 N N N 35.815 115.911 96.680 2.958 1.227 -0.192 O5 SOE 10 SOE C6 C6 C 0 1 N N N 37.592 115.008 98.084 0.608 1.776 -0.039 C6 SOE 11 SOE O6 O6 O 0 1 N N N 38.963 115.223 98.488 -0.645 1.314 0.470 O6 SOE 12 SOE H11 H1 H 0 1 N N N 42.055 115.447 97.165 -2.330 -0.384 1.646 H11 SOE 13 SOE H12 H1A H 0 1 N N N 41.536 114.640 98.681 -2.704 -1.319 0.178 H12 SOE 14 SOE HO1 HO1 H 0 1 N Y N 42.247 116.828 99.027 -4.261 0.460 0.521 HO1 SOE 15 SOE H3 H3 H 0 1 N N N 39.640 117.360 97.018 0.041 -1.084 1.462 H3 SOE 16 SOE HO3 HO3 H 0 1 N Y N 40.174 117.207 94.759 0.251 -2.996 0.045 HO3 SOE 17 SOE H4 H4 H 0 1 N N N 38.023 115.361 95.368 1.341 -0.577 -1.256 H4 SOE 18 SOE HO4 HO4 H 0 1 N Y N 36.831 117.306 94.889 3.254 -1.329 -0.039 HO4 SOE 19 SOE H5 H5 H 0 1 N N N 37.162 117.077 97.755 1.793 0.764 1.451 H5 SOE 20 SOE HO5 HO5 H 0 1 N Y N 35.217 115.830 97.414 3.239 2.104 0.102 HO5 SOE 21 SOE H61 H6 H 0 1 N N N 36.947 114.980 98.975 0.826 2.761 0.373 H61 SOE 22 SOE H62 H6A H 0 1 N N N 37.514 114.052 97.545 0.558 1.839 -1.126 H62 SOE 23 SOE HO2 HO2 H 0 1 N Y N 39.062 113.874 96.316 -1.777 0.733 -1.782 HO2 SOE 24 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SOE C1 O1 SING N N 1 SOE C1 C2 SING N N 2 SOE C2 O2 SING N N 3 SOE C2 C3 SING N N 4 SOE C2 O6 SING N N 5 SOE C3 O3 SING N N 6 SOE C3 C4 SING N N 7 SOE C4 O4 SING N N 8 SOE C4 C5 SING N N 9 SOE C5 O5 SING N N 10 SOE C5 C6 SING N N 11 SOE C6 O6 SING N N 12 SOE C1 H11 SING N N 13 SOE C1 H12 SING N N 14 SOE O1 HO1 SING N N 15 SOE C3 H3 SING N N 16 SOE O3 HO3 SING N N 17 SOE C4 H4 SING N N 18 SOE O4 HO4 SING N N 19 SOE C5 H5 SING N N 20 SOE O5 HO5 SING N N 21 SOE C6 H61 SING N N 22 SOE C6 H62 SING N N 23 SOE O2 HO2 SING N N 24 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SOE SMILES ACDLabs 12.01 "OC1C(O)(OCC(O)C1O)CO" SOE SMILES_CANONICAL CACTVS 3.370 "OC[C@@]1(O)OC[C@H](O)[C@@H](O)[C@@H]1O" SOE SMILES CACTVS 3.370 "OC[C]1(O)OC[CH](O)[CH](O)[CH]1O" SOE SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "C1[C@@H]([C@H]([C@@H]([C@](O1)(CO)O)O)O)O" SOE SMILES "OpenEye OEToolkits" 1.7.0 "C1C(C(C(C(O1)(CO)O)O)O)O" SOE InChI InChI 1.03 "InChI=1S/C6H12O6/c7-2-6(11)5(10)4(9)3(8)1-12-6/h3-5,7-11H,1-2H2/t3-,4+,5-,6+/m0/s1" SOE InChIKey InChI 1.03 LKDRXBCSQODPBY-BGPJRJDNSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SOE "SYSTEMATIC NAME" ACDLabs 12.01 alpha-L-sorbopyranose SOE "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R,3S,4R,5S)-2-(hydroxymethyl)oxane-2,3,4,5-tetrol" SOE "CONDENSED IUPAC CARBOHYDRATE SYMBOL" GMML 1.0 LSorpa SOE "COMMON NAME" GMML 1.0 a-L-sorbopyranose SOE "IUPAC CARBOHYDRATE SYMBOL" PDB-CARE 1.0 a-L-Sorp SOE "SNFG CARBOHYDRATE SYMBOL" GMML 1.0 Sor # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support SOE "CARBOHYDRATE ISOMER" L PDB ? SOE "CARBOHYDRATE RING" pyranose PDB ? SOE "CARBOHYDRATE ANOMER" alpha PDB ? SOE "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SOE "Create component" 2010-05-14 PDBJ SOE "Modify descriptor" 2011-06-04 RCSB SOE "Other modification" 2019-08-12 RCSB SOE "Other modification" 2019-12-19 RCSB SOE "Other modification" 2020-07-03 RCSB SOE "Modify synonyms" 2020-07-17 RCSB SOE "Modify atom id" 2020-07-17 RCSB SOE "Modify component atom id" 2020-07-17 RCSB ##