data_SPO # _chem_comp.id SPO _chem_comp.name SPHEROIDENE _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C41 H60 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 568.914 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SPO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1PCR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SPO CM1 CM1 C 0 1 N N N 42.252 84.730 55.331 -3.010 -0.859 14.783 CM1 SPO 1 SPO O1 O1 O 0 1 N N N 43.577 85.348 55.760 -2.938 0.100 13.727 O1 SPO 2 SPO C1 C1 C 0 1 N N N 44.482 85.873 54.637 -3.841 -0.335 12.710 C1 SPO 3 SPO C2 C2 C 0 1 N N N 45.918 85.957 55.152 -3.386 -1.693 12.170 C2 SPO 4 SPO C3 C3 C 0 1 N N N 44.408 84.915 53.453 -5.247 -0.466 13.299 C3 SPO 5 SPO C4 C4 C 0 1 N N N 44.050 87.267 54.233 -3.859 0.686 11.571 C4 SPO 6 SPO C5 C5 C 0 1 N N N 42.826 87.289 53.463 -2.474 0.815 10.991 C5 SPO 7 SPO C6 C6 C 0 1 N N N 42.711 88.212 52.275 -2.260 0.532 9.702 C6 SPO 8 SPO C7 C7 C 0 1 N N N 41.492 88.787 51.956 -0.958 0.654 9.156 C7 SPO 9 SPO C8 C8 C 0 1 N N N 40.278 88.676 52.895 0.185 1.101 10.029 C8 SPO 10 SPO C9 C9 C 0 1 N N N 41.492 89.605 50.834 -0.741 0.367 7.845 C9 SPO 11 SPO C10 C10 C 0 1 N N N 40.198 90.262 50.310 0.568 0.364 7.334 C10 SPO 12 SPO C11 C11 C 0 1 N N N 40.244 90.955 48.951 0.779 0.180 5.998 C11 SPO 13 SPO C12 C12 C 0 1 N N N 39.072 91.373 48.346 2.084 0.178 5.488 C12 SPO 14 SPO C13 C13 C 0 1 N N N 37.687 91.032 49.005 3.256 0.377 6.415 C13 SPO 15 SPO C14 C14 C 0 1 N N N 39.224 92.026 47.103 2.297 -0.006 4.140 C14 SPO 16 SPO C15 C15 C 0 1 N N N 37.983 92.586 46.317 3.603 -0.069 3.640 C15 SPO 17 SPO C16 C16 C 0 1 N N N 38.043 93.466 44.999 3.816 -0.150 2.281 C16 SPO 18 SPO C17 C17 C 0 1 N N N 36.793 93.847 44.477 5.122 -0.212 1.780 C17 SPO 19 SPO C18 C18 C 0 1 N N N 35.518 93.663 45.304 6.294 -0.191 2.727 C18 SPO 20 SPO C19 C19 C 0 1 N N N 36.698 94.602 43.316 5.335 -0.294 0.421 C19 SPO 21 SPO C20 C20 C 0 1 N N N 37.843 95.029 42.618 4.247 -0.314 -0.458 C20 SPO 22 SPO C21 C21 C 0 1 N N N 37.764 96.188 41.650 4.460 -0.395 -1.816 C21 SPO 23 SPO C22 C22 C 0 1 N N N 39.053 96.847 41.389 3.370 -0.415 -2.697 C22 SPO 24 SPO C23 C23 C 0 1 N N N 39.505 97.179 40.129 3.582 -0.495 -4.043 C23 SPO 25 SPO C24 C24 C 0 1 N N N 38.513 97.679 39.063 4.987 -0.563 -4.582 C24 SPO 26 SPO C25 C25 C 0 1 N N N 40.822 97.637 40.163 2.488 -0.516 -4.926 C25 SPO 27 SPO C26 C26 C 0 1 N N N 41.595 97.936 38.939 2.699 -0.488 -6.268 C26 SPO 28 SPO C27 C27 C 0 1 N N N 43.075 98.059 39.046 1.599 -0.385 -7.156 C27 SPO 29 SPO C28 C28 C 0 1 N N N 43.792 98.480 37.941 1.810 -0.258 -8.470 C28 SPO 30 SPO C29 C29 C 0 1 N N N 43.212 98.520 36.510 3.210 -0.071 -8.994 C29 SPO 31 SPO C30 C30 C 0 1 N N N 45.310 98.711 37.987 0.647 -0.303 -9.428 C30 SPO 32 SPO C31 C31 C 0 1 N N N 45.650 100.011 38.684 0.105 1.111 -9.638 C31 SPO 33 SPO C32 C32 C 0 1 N N N 46.910 100.497 38.312 -1.057 1.066 -10.596 C32 SPO 34 SPO C33 C33 C 0 1 N N N 47.968 100.967 39.084 -2.193 1.635 -10.275 C33 SPO 35 SPO C34 C34 C 0 1 N N N 47.801 101.438 40.527 -2.283 2.492 -9.038 C34 SPO 36 SPO C35 C35 C 0 1 N N N 49.301 101.468 38.441 -3.409 1.432 -11.141 C35 SPO 37 SPO C36 C36 C 0 1 N N N 50.566 100.708 38.877 -4.181 0.203 -10.656 C36 SPO 38 SPO C37 C37 C 0 1 N N N 51.704 100.894 37.906 -5.397 0.000 -11.523 C37 SPO 39 SPO C38 C38 C 0 1 N N N 51.835 100.534 36.560 -5.505 -1.079 -12.256 C38 SPO 40 SPO C39 C39 C 0 1 N N N 52.418 99.196 36.048 -6.798 -1.377 -12.972 C39 SPO 41 SPO C40 C40 C 0 1 N N N 51.297 101.386 35.399 -4.338 -2.023 -12.385 C40 SPO 42 SPO HM11 1HM1 H 0 0 N N N 41.594 84.348 56.146 -2.671 -1.828 14.417 HM11 SPO 43 SPO HM12 2HM1 H 0 0 N N N 41.686 85.455 54.700 -2.374 -0.540 15.609 HM12 SPO 44 SPO HM13 3HM1 H 0 0 N N N 42.438 83.918 54.589 -4.040 -0.942 15.129 HM13 SPO 45 SPO H21A 1H2 H 0 0 N N N 46.575 86.338 54.336 -2.321 -1.653 11.940 H21A SPO 46 SPO H22A 2H2 H 0 0 N N N 46.000 86.565 56.082 -3.567 -2.461 12.921 H22A SPO 47 SPO H23 3H2 H 0 1 N N N 46.277 84.986 55.567 -3.945 -1.930 11.265 H23 SPO 48 SPO H31 1H3 H 0 1 N N N 45.065 85.296 52.637 -5.514 0.457 13.812 H31 SPO 49 SPO H32A 2H3 H 0 0 N N N 44.651 83.865 53.739 -5.961 -0.655 12.497 H32A SPO 50 SPO H33 3H3 H 0 1 N N N 43.361 84.743 53.109 -5.269 -1.294 14.007 H33 SPO 51 SPO H41 1H4 H 0 1 N N N 43.967 87.929 55.126 -4.548 0.353 10.795 H41 SPO 52 SPO H42 2H4 H 0 1 N N N 44.869 87.792 53.688 -4.183 1.653 11.955 H42 SPO 53 SPO H5 H5 H 0 1 N N N 42.004 86.621 53.772 -1.654 1.135 11.616 H5 SPO 54 SPO H6 H6 H 0 1 N N N 43.552 88.477 51.612 -3.080 0.212 9.076 H6 SPO 55 SPO H81 1H8 H 0 1 N N N 39.296 89.138 52.638 0.679 0.228 10.457 H81 SPO 56 SPO H82 2H8 H 0 1 N N N 40.102 87.594 53.101 0.900 1.666 9.430 H82 SPO 57 SPO H83 3H8 H 0 1 N N N 40.584 89.056 53.897 -0.194 1.733 10.831 H83 SPO 58 SPO H9 H9 H 0 1 N N N 42.486 89.728 50.374 -1.574 0.141 7.197 H9 SPO 59 SPO H10 H10 H 0 1 N N N 39.262 90.236 50.893 1.407 0.507 7.998 H10 SPO 60 SPO H11 H11 H 0 1 N N N 41.165 91.162 48.380 -0.060 0.038 5.334 H11 SPO 61 SPO H131 1H13 H 0 0 N N N 36.742 91.368 48.517 3.460 1.443 6.518 H131 SPO 62 SPO H132 2H13 H 0 0 N N N 37.631 89.929 49.159 3.021 -0.043 7.393 H132 SPO 63 SPO H133 3H13 H 0 0 N N N 37.694 91.403 50.056 4.133 -0.123 6.005 H133 SPO 64 SPO H14 H14 H 0 1 N N N 40.269 92.095 46.759 1.456 -0.103 3.469 H14 SPO 65 SPO H15 H15 H 0 1 N N N 36.987 92.341 46.724 4.443 -0.053 4.318 H15 SPO 66 SPO H16 H16 H 0 1 N N N 38.939 93.807 44.454 2.976 -0.166 1.602 H16 SPO 67 SPO H181 1H18 H 0 0 N N N 34.527 93.964 44.890 7.222 -0.247 2.158 H181 SPO 68 SPO H182 2H18 H 0 0 N N N 35.455 92.594 45.616 6.277 0.733 3.305 H182 SPO 69 SPO H183 3H18 H 0 0 N N N 35.659 94.176 46.283 6.230 -1.043 3.404 H183 SPO 70 SPO H19 H19 H 0 1 N N N 35.695 94.867 42.941 6.343 -0.342 0.035 H19 SPO 71 SPO H20 H20 H 0 1 N N N 38.773 94.472 42.823 3.239 -0.266 -0.071 H20 SPO 72 SPO H21 H21 H 0 1 N N N 36.832 96.528 41.168 5.468 -0.443 -2.202 H21 SPO 73 SPO H22 H22 H 0 1 N N N 39.740 97.115 42.209 2.363 -0.367 -2.310 H22 SPO 74 SPO H241 1H24 H 0 0 N N N 38.878 97.947 38.044 4.961 -0.529 -5.671 H241 SPO 75 SPO H242 2H24 H 0 0 N N N 37.698 96.925 38.958 5.561 0.284 -4.206 H242 SPO 76 SPO H243 3H24 H 0 0 N N N 37.957 98.551 39.479 5.457 -1.492 -4.258 H243 SPO 77 SPO H25 H25 H 0 1 N N N 41.256 97.764 41.168 1.481 -0.553 -4.538 H25 SPO 78 SPO H26 H26 H 0 1 N N N 41.081 98.063 37.971 3.704 -0.544 -6.659 H26 SPO 79 SPO H27 H27 H 0 1 N N N 43.650 97.834 39.959 0.590 -0.408 -6.771 H27 SPO 80 SPO H291 1H29 H 0 0 N N N 43.790 98.859 35.619 3.902 0.018 -8.156 H291 SPO 81 SPO H292 2H29 H 0 0 N N N 42.824 97.499 36.282 3.488 -0.931 -9.604 H292 SPO 82 SPO H293 3H29 H 0 0 N N N 42.279 99.129 36.549 3.254 0.833 -9.600 H293 SPO 83 SPO H301 1H30 H 0 0 N N N 45.840 97.847 38.451 0.978 -0.711 -10.383 H301 SPO 84 SPO H302 2H30 H 0 0 N N N 45.761 98.663 36.968 -0.138 -0.936 -9.016 H302 SPO 85 SPO H311 1H31 H 0 0 N N N 44.857 100.777 38.517 -0.226 1.519 -8.683 H311 SPO 86 SPO H312 2H31 H 0 0 N N N 45.568 99.908 39.791 0.891 1.744 -10.050 H312 SPO 87 SPO H32 H32 H 0 1 N N N 47.101 100.512 37.225 -0.954 0.565 -11.547 H32 SPO 88 SPO H341 1H34 H 0 0 N N N 48.648 101.814 41.145 -1.291 2.602 -8.600 H341 SPO 89 SPO H342 2H34 H 0 0 N N N 47.010 102.224 40.531 -2.673 3.474 -9.305 H342 SPO 90 SPO H343 3H34 H 0 0 N N N 47.317 100.609 41.094 -2.949 2.020 -8.317 H343 SPO 91 SPO H351 1H35 H 0 0 N N N 49.215 101.464 37.329 -4.050 2.311 -11.080 H351 SPO 92 SPO H352 2H35 H 0 0 N N N 49.428 102.560 38.624 -3.097 1.280 -12.175 H352 SPO 93 SPO H361 1H36 H 0 0 N N N 50.869 100.989 39.912 -3.540 -0.676 -10.718 H361 SPO 94 SPO H362 2H36 H 0 0 N N N 50.350 99.626 39.043 -4.492 0.354 -9.623 H362 SPO 95 SPO H37 H37 H 0 1 N N N 52.625 101.393 38.249 -6.179 0.744 -11.538 H37 SPO 96 SPO H391 1H39 H 0 0 N N N 52.522 98.909 34.975 -6.699 -2.310 -13.527 H391 SPO 97 SPO H392 2H39 H 0 0 N N N 53.428 99.091 36.506 -7.603 -1.472 -12.243 H392 SPO 98 SPO H393 3H39 H 0 0 N N N 51.834 98.383 36.541 -7.027 -0.566 -13.662 H393 SPO 99 SPO H401 1H40 H 0 0 N N N 51.401 101.099 34.326 -3.465 -1.590 -11.896 H401 SPO 100 SPO H402 2H40 H 0 0 N N N 50.212 101.559 35.590 -4.585 -2.974 -11.912 H402 SPO 101 SPO H403 3H40 H 0 0 N N N 51.728 102.408 35.511 -4.119 -2.188 -13.440 H403 SPO 102 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SPO CM1 O1 SING N N 1 SPO CM1 HM11 SING N N 2 SPO CM1 HM12 SING N N 3 SPO CM1 HM13 SING N N 4 SPO O1 C1 SING N N 5 SPO C1 C2 SING N N 6 SPO C1 C3 SING N N 7 SPO C1 C4 SING N N 8 SPO C2 H21A SING N N 9 SPO C2 H22A SING N N 10 SPO C2 H23 SING N N 11 SPO C3 H31 SING N N 12 SPO C3 H32A SING N N 13 SPO C3 H33 SING N N 14 SPO C4 C5 SING N N 15 SPO C4 H41 SING N N 16 SPO C4 H42 SING N N 17 SPO C5 C6 DOUB N E 18 SPO C5 H5 SING N N 19 SPO C6 C7 SING N N 20 SPO C6 H6 SING N N 21 SPO C7 C8 SING N N 22 SPO C7 C9 DOUB N E 23 SPO C8 H81 SING N N 24 SPO C8 H82 SING N N 25 SPO C8 H83 SING N N 26 SPO C9 C10 SING N N 27 SPO C9 H9 SING N N 28 SPO C10 C11 DOUB N E 29 SPO C10 H10 SING N N 30 SPO C11 C12 SING N N 31 SPO C11 H11 SING N N 32 SPO C12 C13 SING N N 33 SPO C12 C14 DOUB N E 34 SPO C13 H131 SING N N 35 SPO C13 H132 SING N N 36 SPO C13 H133 SING N N 37 SPO C14 C15 SING N N 38 SPO C14 H14 SING N N 39 SPO C15 C16 DOUB N E 40 SPO C15 H15 SING N N 41 SPO C16 C17 SING N N 42 SPO C16 H16 SING N N 43 SPO C17 C18 SING N N 44 SPO C17 C19 DOUB N Z 45 SPO C18 H181 SING N N 46 SPO C18 H182 SING N N 47 SPO C18 H183 SING N N 48 SPO C19 C20 SING N N 49 SPO C19 H19 SING N N 50 SPO C20 C21 DOUB N E 51 SPO C20 H20 SING N N 52 SPO C21 C22 SING N N 53 SPO C21 H21 SING N N 54 SPO C22 C23 DOUB N E 55 SPO C22 H22 SING N N 56 SPO C23 C24 SING N N 57 SPO C23 C25 SING N N 58 SPO C24 H241 SING N N 59 SPO C24 H242 SING N N 60 SPO C24 H243 SING N N 61 SPO C25 C26 DOUB N E 62 SPO C25 H25 SING N N 63 SPO C26 C27 SING N N 64 SPO C26 H26 SING N N 65 SPO C27 C28 DOUB N E 66 SPO C27 H27 SING N N 67 SPO C28 C29 SING N N 68 SPO C28 C30 SING N N 69 SPO C29 H291 SING N N 70 SPO C29 H292 SING N N 71 SPO C29 H293 SING N N 72 SPO C30 C31 SING N N 73 SPO C30 H301 SING N N 74 SPO C30 H302 SING N N 75 SPO C31 C32 SING N N 76 SPO C31 H311 SING N N 77 SPO C31 H312 SING N N 78 SPO C32 C33 DOUB N E 79 SPO C32 H32 SING N N 80 SPO C33 C34 SING N N 81 SPO C33 C35 SING N N 82 SPO C34 H341 SING N N 83 SPO C34 H342 SING N N 84 SPO C34 H343 SING N N 85 SPO C35 C36 SING N N 86 SPO C35 H351 SING N N 87 SPO C35 H352 SING N N 88 SPO C36 C37 SING N N 89 SPO C36 H361 SING N N 90 SPO C36 H362 SING N N 91 SPO C37 C38 DOUB N N 92 SPO C37 H37 SING N N 93 SPO C38 C39 SING N N 94 SPO C38 C40 SING N N 95 SPO C39 H391 SING N N 96 SPO C39 H392 SING N N 97 SPO C39 H393 SING N N 98 SPO C40 H401 SING N N 99 SPO C40 H402 SING N N 100 SPO C40 H403 SING N N 101 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SPO SMILES ACDLabs 10.04 "O(C(C\C=C\C(=C\C=C\C(=C\C=C\C(=C/C=C/C=C(/C=C/C=C(\C)CC\C=C(/C)CC\C=C(/C)C)C)C)C)C)(C)C)C" SPO SMILES_CANONICAL CACTVS 3.341 "COC(C)(C)C\C=C\C(C)=C\C=C\C(C)=C\C=C\C(C)=C/C=C/C=C(C)/C=C/C=C(\C)CC\C=C(/C)CCC=C(C)C" SPO SMILES CACTVS 3.341 "COC(C)(C)CC=CC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)CCC=C(C)CCC=C(C)C" SPO SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=CCCC(=CCC/C(=C/C=CC(=CC=C\C=C(\C)/C=C/C=C(\C)/C=C/C=C(\C)/C=CCC(C)(C)OC)C)/C)C)C" SPO SMILES "OpenEye OEToolkits" 1.5.0 "CC(=CCCC(=CCCC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC=C(C)C=CCC(C)(C)OC)C)C)C)C" SPO InChI InChI 1.03 ;InChI=1S/C41H60O/c1-34(2)20-14-23-37(5)26-17-29-38(6)27-15-24-35(3)21-12-13-22-36(4)25-16-28-39(7)30-18-31-40(8)32-19-33-41(9,10)42-11/h12-13,15-16,18-22,24-28,30-32H,14,17,23,29,33H2,1-11H3/b13-12+,24-15+,25-16+,30-18+,32-19+,35-21+,36-22-,37-26+,38-27+,39-28+,40-31+ ; SPO InChIKey InChI 1.03 FJOCMTHZSURUFA-KXCOHNEYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SPO "SYSTEMATIC NAME" ACDLabs 10.04 "(3E,13cis)-1-methoxy-3,4-didehydro-1,2,7',8'-tetrahydro-psi,psi-carotene" SPO "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(10E,18Z,20E,22E,24E,26E)-31-methoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-2,6,10,12,14,16,18,20,22,24,26,28-dodecaene" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SPO "Create component" 1999-07-08 RCSB SPO "Modify descriptor" 2011-06-04 RCSB #