data_SQ3 # _chem_comp.id SQ3 _chem_comp.name "(1R,2S,5S)-3-[(2,4-dichlorophenoxy)acetyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H29 Cl2 N3 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-28 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 498.399 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SQ3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8TY5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SQ3 C11 C1 C 0 1 N N N N N N -9.011 -17.260 -18.313 2.046 -0.616 0.107 C11 SQ3 1 SQ3 C12 C2 C 0 1 N N N N N N -9.505 -15.939 -17.793 0.636 -0.355 -0.354 C12 SQ3 2 SQ3 C13 C3 C 0 1 N N N N N N -7.911 -14.853 -19.375 -0.221 -2.522 0.661 C13 SQ3 3 SQ3 C14 C4 C 0 1 N N S N N N -9.056 -13.560 -17.654 -1.773 -1.163 -0.444 C14 SQ3 4 SQ3 C15 C5 C 0 1 N N N N N N -10.473 -13.086 -17.845 -2.593 -0.703 0.733 C15 SQ3 5 SQ3 C16 C6 C 0 1 N N S N N N -7.286 -13.453 -19.389 -1.133 -3.502 -0.108 C16 SQ3 6 SQ3 C17 C7 C 0 1 N N S N N N -12.455 -12.072 -16.884 -4.641 0.210 1.687 C17 SQ3 7 SQ3 C18 C8 C 0 1 N N N N N N -6.592 -12.918 -18.095 -1.144 -3.429 -1.636 C18 SQ3 8 SQ3 C19 C9 C 0 1 N N N N N N -13.373 -12.868 -15.918 -5.688 1.221 1.215 C19 SQ3 9 SQ3 C20 C10 C 0 1 N N S N N N -13.507 -14.328 -16.375 -4.986 2.477 0.695 C20 SQ3 10 SQ3 C21 C11 C 0 1 N N N N N N -14.322 -14.520 -17.657 -6.025 3.528 0.240 C21 SQ3 11 SQ3 C22 C12 C 0 1 N N N N N N -15.066 -15.844 -17.448 -6.143 3.221 -1.269 C22 SQ3 12 SQ3 C23 C13 C 0 1 N N N N N N -5.555 -12.035 -18.801 -1.672 -4.648 -2.396 C23 SQ3 13 SQ3 C24 C14 C 0 1 N N N N N N -14.223 -15.203 -15.385 -4.201 2.164 -0.559 C24 SQ3 14 SQ3 C25 C15 C 0 1 N N N N N N -5.979 -14.257 -17.639 0.000 -2.674 -2.314 C25 SQ3 15 SQ3 C3 C16 C 0 1 Y N N N N N -10.845 -18.783 -18.741 4.203 0.382 0.035 C3 SQ3 16 SQ3 C34 C17 C 0 1 N N R N N N -8.093 -12.651 -18.421 -2.156 -2.606 -0.836 C34 SQ3 17 SQ3 C4 C18 C 0 1 Y N N N N N -10.283 -19.879 -18.101 4.671 -0.712 0.749 C4 SQ3 18 SQ3 C5 C19 C 0 1 Y N N N N N -11.092 -20.914 -17.659 6.008 -0.794 1.087 C5 SQ3 19 SQ3 C6 C20 C 0 1 Y N N N N N -12.467 -20.889 -17.893 6.880 0.213 0.716 C6 SQ3 20 SQ3 C7 C21 C 0 1 Y N N N N N -13.030 -19.790 -18.573 6.417 1.305 0.004 C7 SQ3 21 SQ3 C8 C22 C 0 1 N N N N N N -12.424 -10.573 -16.553 -5.343 -0.993 2.321 C8 SQ3 22 SQ3 C9 C23 C 0 1 Y N N N N N -12.216 -18.734 -18.993 5.080 1.391 -0.338 C9 SQ3 23 SQ3 N13 N1 N 0 1 N N N N N N -8.867 -14.867 -18.261 -0.339 -1.243 -0.078 N13 SQ3 24 SQ3 N16 N2 N 0 1 N N N N N N -11.078 -12.542 -16.795 -3.844 -0.237 0.543 N16 SQ3 25 SQ3 N23 N3 N 0 1 N N N N N N -15.031 -16.068 -16.007 -4.869 2.595 -1.643 N23 SQ3 26 SQ3 O1 O1 O 0 1 N N N N N N -10.028 -17.773 -19.153 2.889 0.462 -0.304 O1 SQ3 27 SQ3 O26 O2 O 0 1 N N N N N N -14.048 -15.108 -14.181 -3.125 1.604 -0.584 O26 SQ3 28 SQ3 O33 O3 O 0 1 N N N N N N -10.426 -15.898 -16.999 0.378 0.655 -0.975 O33 SQ3 29 SQ3 O38 O4 O 0 1 N N N N N N -11.028 -13.213 -18.926 -2.128 -0.751 1.852 O38 SQ3 30 SQ3 O9 O5 O 0 1 N N N N N N -13.731 -9.970 -16.684 -6.284 -1.538 1.395 O9 SQ3 31 SQ3 CL1 CL1 CL 0 0 N N N N N N -12.902 -17.309 -19.862 4.498 2.762 -1.230 CL1 SQ3 32 SQ3 CL2 CL2 CL 0 0 N N N N N N -13.446 -22.308 -17.288 8.560 0.106 1.143 CL2 SQ3 33 SQ3 H1 H1 H 0 1 N N N N N N -8.825 -17.951 -17.477 2.064 -0.697 1.194 H1 SQ3 34 SQ3 H2 H2 H 0 1 N N N N N N -8.082 -17.119 -18.885 2.406 -1.547 -0.332 H2 SQ3 35 SQ3 H3 H3 H 0 1 N N N N N N -8.430 -15.048 -20.325 -0.571 -2.402 1.686 H3 SQ3 36 SQ3 H4 H4 H 0 1 N N N N N N -7.134 -15.615 -19.219 0.811 -2.873 0.651 H4 SQ3 37 SQ3 H5 H5 H 0 1 N N N N N N -8.795 -13.574 -16.586 -1.912 -0.490 -1.290 H5 SQ3 38 SQ3 H6 H6 H 0 1 N N N N N N -6.998 -13.011 -20.354 -1.431 -4.419 0.401 H6 SQ3 39 SQ3 H7 H7 H 0 1 N N N N N N -12.829 -12.201 -17.910 -3.989 0.679 2.423 H7 SQ3 40 SQ3 H8 H8 H 0 1 N N N N N N -12.940 -12.844 -14.907 -6.284 0.780 0.416 H8 SQ3 41 SQ3 H9 H9 H 0 1 N N N N N N -14.369 -12.402 -15.901 -6.338 1.487 2.049 H9 SQ3 42 SQ3 H10 H10 H 0 1 N N N N N N -12.498 -14.733 -16.541 -4.331 2.892 1.462 H10 SQ3 43 SQ3 H11 H11 H 0 1 N N N N N N -13.659 -14.581 -18.533 -6.979 3.378 0.745 H11 SQ3 44 SQ3 H12 H12 H 0 1 N N N N N N -15.033 -13.692 -17.792 -5.654 4.540 0.404 H12 SQ3 45 SQ3 H13 H13 H 0 1 N N N N N N -16.104 -15.765 -17.803 -6.969 2.532 -1.450 H13 SQ3 46 SQ3 H14 H14 H 0 1 N N N N N N -14.558 -16.662 -17.980 -6.290 4.143 -1.832 H14 SQ3 47 SQ3 H15 H15 H 0 1 N N N N N N -4.925 -11.536 -18.050 -2.112 -5.353 -1.691 H15 SQ3 48 SQ3 H16 H16 H 0 1 N N N N N N -4.925 -12.659 -19.452 -2.429 -4.330 -3.112 H16 SQ3 49 SQ3 H17 H17 H 0 1 N N N N N N -6.072 -11.277 -19.408 -0.850 -5.129 -2.926 H17 SQ3 50 SQ3 H18 H18 H 0 1 N N N N N N -5.421 -14.105 -16.704 0.632 -3.380 -2.853 H18 SQ3 51 SQ3 H19 H19 H 0 1 N N N N N N -6.782 -14.990 -17.472 -0.410 -1.946 -3.014 H19 SQ3 52 SQ3 H20 H20 H 0 1 N N N N N N -5.297 -14.632 -18.417 0.593 -2.158 -1.559 H20 SQ3 53 SQ3 H21 H21 H 0 1 N N N N N N -8.405 -11.628 -18.677 -3.214 -2.863 -0.883 H21 SQ3 54 SQ3 H22 H22 H 0 1 N N N N N N -9.215 -19.925 -17.947 3.990 -1.498 1.040 H22 SQ3 55 SQ3 H23 H23 H 0 1 N N N N N N -10.654 -21.747 -17.129 6.372 -1.646 1.643 H23 SQ3 56 SQ3 H24 H24 H 0 1 N N N N N N -14.092 -19.764 -18.770 7.100 2.090 -0.285 H24 SQ3 57 SQ3 H25 H25 H 0 1 N N N N N N -12.074 -10.443 -15.518 -4.603 -1.752 2.577 H25 SQ3 58 SQ3 H26 H26 H 0 1 N N N N N N -11.729 -10.070 -17.241 -5.864 -0.675 3.224 H26 SQ3 59 SQ3 H27 H27 H 0 1 N N N N N N -10.582 -12.454 -15.931 -4.215 -0.199 -0.352 H27 SQ3 60 SQ3 H28 H28 H 0 1 N N N N N N -15.550 -16.784 -15.540 -4.550 2.506 -2.555 H28 SQ3 61 SQ3 H29 H29 H 0 1 N N N N N N -13.676 -9.045 -16.473 -6.767 -2.305 1.730 H29 SQ3 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SQ3 CL1 C9 SING N N 1 SQ3 C16 C13 SING N N 2 SQ3 C16 C34 SING N N 3 SQ3 C16 C18 SING N N 4 SQ3 C13 N13 SING N N 5 SQ3 O1 C3 SING N N 6 SQ3 O1 C11 SING N N 7 SQ3 C9 C3 DOUB Y N 8 SQ3 C9 C7 SING Y N 9 SQ3 O38 C15 DOUB N N 10 SQ3 C23 C18 SING N N 11 SQ3 C3 C4 SING Y N 12 SQ3 C7 C6 DOUB Y N 13 SQ3 C34 C18 SING N N 14 SQ3 C34 C14 SING N N 15 SQ3 C11 C12 SING N N 16 SQ3 N13 C12 SING N N 17 SQ3 N13 C14 SING N N 18 SQ3 C4 C5 DOUB Y N 19 SQ3 C18 C25 SING N N 20 SQ3 C6 C5 SING Y N 21 SQ3 C6 CL2 SING N N 22 SQ3 C15 C14 SING N N 23 SQ3 C15 N16 SING N N 24 SQ3 C12 O33 DOUB N N 25 SQ3 C21 C22 SING N N 26 SQ3 C21 C20 SING N N 27 SQ3 C22 N23 SING N N 28 SQ3 C17 N16 SING N N 29 SQ3 C17 C8 SING N N 30 SQ3 C17 C19 SING N N 31 SQ3 O9 C8 SING N N 32 SQ3 C20 C19 SING N N 33 SQ3 C20 C24 SING N N 34 SQ3 N23 C24 SING N N 35 SQ3 C24 O26 DOUB N N 36 SQ3 C11 H1 SING N N 37 SQ3 C11 H2 SING N N 38 SQ3 C13 H3 SING N N 39 SQ3 C13 H4 SING N N 40 SQ3 C14 H5 SING N N 41 SQ3 C16 H6 SING N N 42 SQ3 C17 H7 SING N N 43 SQ3 C19 H8 SING N N 44 SQ3 C19 H9 SING N N 45 SQ3 C20 H10 SING N N 46 SQ3 C21 H11 SING N N 47 SQ3 C21 H12 SING N N 48 SQ3 C22 H13 SING N N 49 SQ3 C22 H14 SING N N 50 SQ3 C23 H15 SING N N 51 SQ3 C23 H16 SING N N 52 SQ3 C23 H17 SING N N 53 SQ3 C25 H18 SING N N 54 SQ3 C25 H19 SING N N 55 SQ3 C25 H20 SING N N 56 SQ3 C34 H21 SING N N 57 SQ3 C4 H22 SING N N 58 SQ3 C5 H23 SING N N 59 SQ3 C7 H24 SING N N 60 SQ3 C8 H25 SING N N 61 SQ3 C8 H26 SING N N 62 SQ3 N16 H27 SING N N 63 SQ3 N23 H28 SING N N 64 SQ3 O9 H29 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SQ3 SMILES ACDLabs 12.01 "CC1(C)C2C(C(=O)NC(CC3CCNC3=O)CO)N(CC21)C(=O)COc1ccc(Cl)cc1Cl" SQ3 InChI InChI 1.06 "InChI=1S/C23H29Cl2N3O5/c1-23(2)15-9-28(18(30)11-33-17-4-3-13(24)8-16(17)25)20(19(15)23)22(32)27-14(10-29)7-12-5-6-26-21(12)31/h3-4,8,12,14-15,19-20,29H,5-7,9-11H2,1-2H3,(H,26,31)(H,27,32)/t12-,14-,15-,19-,20-/m0/s1" SQ3 InChIKey InChI 1.06 GDZSJNGXWJGQFB-ZUHDPNGNSA-N SQ3 SMILES_CANONICAL CACTVS 3.385 "CC1(C)[C@H]2CN([C@@H]([C@@H]12)C(=O)N[C@H](CO)C[C@@H]3CCNC3=O)C(=O)COc4ccc(Cl)cc4Cl" SQ3 SMILES CACTVS 3.385 "CC1(C)[CH]2CN([CH]([CH]12)C(=O)N[CH](CO)C[CH]3CCNC3=O)C(=O)COc4ccc(Cl)cc4Cl" SQ3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)COc3ccc(cc3Cl)Cl)C(=O)N[C@@H](C[C@@H]4CCNC4=O)CO)C" SQ3 SMILES "OpenEye OEToolkits" 2.0.7 "CC1(C2C1C(N(C2)C(=O)COc3ccc(cc3Cl)Cl)C(=O)NC(CC4CCNC4=O)CO)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier SQ3 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,5S)-3-[(2,4-dichlorophenoxy)acetyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide" SQ3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},5~{S})-3-[2-[2,4-bis(chloranyl)phenoxy]ethanoyl]-6,6-dimethyl-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SQ3 "Create component" 2023-08-28 RCSB SQ3 "Initial release" 2024-08-28 RCSB #