data_SQB # _chem_comp.id SQB _chem_comp.name "8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(3-methoxy-6-methyl-pyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H27 Cl N6 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-11-30 _chem_comp.pdbx_modified_date 2020-12-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 522.983 _chem_comp.one_letter_code ? _chem_comp.three_letter_code SQB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7B35 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal SQB C7 C1 C 0 1 Y N N 13.094 29.950 14.715 1.057 0.525 -0.014 C7 SQB 1 SQB C8 C2 C 0 1 Y N N 12.215 30.666 13.908 1.911 1.541 -0.449 C8 SQB 2 SQB C9 C3 C 0 1 Y N N 11.884 30.232 12.638 3.276 1.351 -0.424 C9 SQB 3 SQB C10 C4 C 0 1 Y N N 12.424 29.051 12.138 3.803 0.144 0.035 C10 SQB 4 SQB C11 C5 C 0 1 Y N N 12.107 28.588 10.755 5.271 -0.060 0.062 C11 SQB 5 SQB C12 C6 C 0 1 Y N N 10.872 28.056 10.382 5.848 -0.814 1.089 C12 SQB 6 SQB O1 O1 O 0 1 N N N 15.685 31.100 15.181 -0.698 -0.633 -1.903 O1 SQB 7 SQB C1 C7 C 0 1 Y N N 14.386 31.557 20.753 -5.076 2.010 0.728 C1 SQB 8 SQB C2 C8 C 0 1 Y N N 12.520 30.976 19.588 -3.084 2.496 1.786 C2 SQB 9 SQB C3 C9 C 0 1 Y N N 14.641 31.110 18.542 -3.175 1.061 -0.160 C3 SQB 10 SQB C4 C10 C 0 1 Y N N 13.266 30.852 18.412 -2.415 1.701 0.842 C4 SQB 11 SQB C5 C11 C 0 1 N N N 12.770 30.489 17.120 -1.014 1.526 0.894 C5 SQB 12 SQB C6 C12 C 0 1 N N N 13.568 30.452 16.029 -0.409 0.728 -0.041 C6 SQB 13 SQB O2 O2 O 0 1 N N N 17.591 29.082 18.206 -4.617 -1.587 -0.463 O2 SQB 14 SQB O3 O3 O 0 1 N N N 19.058 30.363 17.021 -2.687 -2.559 -1.345 O3 SQB 15 SQB N N1 N 0 1 N N N 14.933 31.939 21.912 -6.446 2.174 0.676 N SQB 16 SQB C C13 C 0 1 N N N 16.360 32.025 22.133 -7.122 3.009 1.673 C SQB 17 SQB O O4 O 0 1 N N N 9.905 27.994 11.346 5.075 -1.360 2.063 O SQB 18 SQB C13 C14 C 0 1 N N N 8.646 27.435 10.983 5.743 -2.116 3.076 C13 SQB 19 SQB C14 C15 C 0 1 Y N N 10.697 27.625 9.076 7.226 -0.996 1.097 C14 SQB 20 SQB C15 C16 C 0 1 Y N N 11.753 27.742 8.193 7.974 -0.419 0.082 C15 SQB 21 SQB C16 C17 C 0 1 Y N N 12.956 28.284 8.627 7.335 0.313 -0.901 C16 SQB 22 SQB C17 C18 C 0 1 N N N 14.125 28.436 7.709 8.148 0.940 -2.005 C17 SQB 23 SQB C18 C19 C 0 1 Y N N 13.284 28.321 12.947 2.950 -0.871 0.470 C18 SQB 24 SQB C19 C20 C 0 1 Y N N 13.614 28.758 14.215 1.586 -0.684 0.440 C19 SQB 25 SQB C20 C21 C 0 1 N N N 14.960 30.878 16.144 -1.227 0.079 -1.068 C20 SQB 26 SQB C21 C22 C 0 1 N N N 16.899 31.274 17.558 -3.362 -0.378 -2.138 C21 SQB 27 SQB C22 C23 C 0 1 N N N 17.697 30.041 17.178 -3.827 -1.749 -1.643 C22 SQB 28 SQB C23 C24 C 0 1 N N N 18.218 27.847 17.839 -5.079 -2.820 0.096 C23 SQB 29 SQB C24 C25 C 0 1 N N N 19.678 28.058 17.489 -3.869 -3.704 0.419 C24 SQB 30 SQB C25 C26 C 0 1 N N N 19.812 29.240 16.549 -3.018 -3.859 -0.846 C25 SQB 31 SQB N1 N2 N 0 1 Y N N 13.062 31.329 20.759 -4.394 2.621 1.692 N1 SQB 32 SQB N2 N3 N 0 1 Y N N 15.214 31.458 19.700 -4.490 1.247 -0.181 N2 SQB 33 SQB N3 N4 N 0 1 Y N N 13.126 28.700 9.891 6.027 0.468 -0.891 N3 SQB 34 SQB N4 N5 N 0 1 N N N 15.454 31.058 17.421 -2.560 0.271 -1.099 N4 SQB 35 SQB N5 N6 N 0 1 N N N 20.278 26.844 16.927 -4.330 -5.024 0.870 N5 SQB 36 SQB CL CL1 CL 0 0 N N N 11.496 32.139 14.475 1.254 3.043 -1.020 CL SQB 37 SQB H1 H1 H 0 1 N N N 11.204 30.812 12.032 3.937 2.136 -0.760 H1 SQB 38 SQB H2 H2 H 0 1 N N N 11.459 30.778 19.549 -2.538 2.996 2.573 H2 SQB 39 SQB H3 H3 H 0 1 N N N 11.725 30.237 17.013 -0.428 2.014 1.659 H3 SQB 40 SQB H4 H4 H 0 1 N N N 14.573 32.854 22.096 -6.960 1.737 -0.020 H4 SQB 41 SQB H5 H5 H 0 1 N N N 16.553 32.361 23.162 -8.193 3.018 1.472 H5 SQB 42 SQB H6 H6 H 0 1 N N N 16.815 31.035 21.980 -6.943 2.603 2.668 H6 SQB 43 SQB H7 H7 H 0 1 N N N 16.798 32.744 21.425 -6.733 4.025 1.619 H7 SQB 44 SQB H8 H8 H 0 1 N N N 7.973 27.451 11.853 5.011 -2.495 3.789 H8 SQB 45 SQB H9 H9 H 0 1 N N N 8.204 28.026 10.167 6.270 -2.952 2.616 H9 SQB 46 SQB H10 H10 H 0 1 N N N 8.789 26.397 10.648 6.458 -1.476 3.593 H10 SQB 47 SQB H11 H11 H 0 1 N N N 9.754 27.206 8.755 7.702 -1.572 1.877 H11 SQB 48 SQB H12 H12 H 0 1 N N N 11.644 27.414 7.170 9.047 -0.538 0.062 H12 SQB 49 SQB H13 H13 H 0 1 N N N 14.966 28.886 8.257 8.235 0.239 -2.835 H13 SQB 50 SQB H14 H14 H 0 1 N N N 14.423 27.448 7.328 7.654 1.850 -2.348 H14 SQB 51 SQB H15 H15 H 0 1 N N N 13.847 29.086 6.866 9.142 1.185 -1.631 H15 SQB 52 SQB H16 H16 H 0 1 N N N 13.702 27.396 12.579 3.359 -1.805 0.826 H16 SQB 53 SQB H17 H17 H 0 1 N N N 14.282 28.169 14.826 0.926 -1.470 0.777 H17 SQB 54 SQB H18 H18 H 0 1 N N N 17.122 31.533 18.604 -2.760 -0.502 -3.038 H18 SQB 55 SQB H19 H19 H 0 1 N N N 17.197 32.106 16.903 -4.231 0.240 -2.365 H19 SQB 56 SQB H20 H20 H 0 1 N N N 17.292 29.636 16.239 -4.424 -2.232 -2.417 H20 SQB 57 SQB H21 H21 H 0 1 N N N 17.697 27.425 16.967 -5.639 -2.620 1.010 H21 SQB 58 SQB H22 H22 H 0 1 N N N 18.149 27.145 18.683 -5.723 -3.328 -0.622 H22 SQB 59 SQB H23 H23 H 0 1 N N N 20.211 28.308 18.418 -3.275 -3.237 1.204 H23 SQB 60 SQB H24 H24 H 0 1 N N N 19.442 28.951 15.554 -3.582 -4.407 -1.601 H24 SQB 61 SQB H25 H25 H 0 1 N N N 20.872 29.524 16.478 -2.103 -4.401 -0.606 H25 SQB 62 SQB H26 H26 H 0 1 N N N 20.170 26.089 17.573 -3.549 -5.624 1.089 H26 SQB 63 SQB H27 H27 H 0 1 N N N 19.822 26.614 16.067 -4.953 -4.939 1.659 H27 SQB 64 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal SQB C17 C16 SING N N 1 SQB C15 C16 DOUB Y N 2 SQB C15 C14 SING Y N 3 SQB C16 N3 SING Y N 4 SQB C14 C12 DOUB Y N 5 SQB N3 C11 DOUB Y N 6 SQB C12 C11 SING Y N 7 SQB C12 O SING N N 8 SQB C11 C10 SING N N 9 SQB C13 O SING N N 10 SQB C10 C9 DOUB Y N 11 SQB C10 C18 SING Y N 12 SQB C9 C8 SING Y N 13 SQB C18 C19 DOUB Y N 14 SQB C8 CL SING N N 15 SQB C8 C7 DOUB Y N 16 SQB C19 C7 SING Y N 17 SQB C7 C6 SING N N 18 SQB O1 C20 DOUB N N 19 SQB C6 C20 SING N N 20 SQB C6 C5 DOUB N N 21 SQB C20 N4 SING N N 22 SQB C25 O3 SING N N 23 SQB C25 C24 SING N N 24 SQB N5 C24 SING N N 25 SQB O3 C22 SING N N 26 SQB C5 C4 SING N N 27 SQB C22 C21 SING N N 28 SQB C22 O2 SING N N 29 SQB N4 C21 SING N N 30 SQB N4 C3 SING N N 31 SQB C24 C23 SING N N 32 SQB C23 O2 SING N N 33 SQB C4 C3 DOUB Y N 34 SQB C4 C2 SING Y N 35 SQB C3 N2 SING Y N 36 SQB C2 N1 DOUB Y N 37 SQB N2 C1 DOUB Y N 38 SQB C1 N1 SING Y N 39 SQB C1 N SING N N 40 SQB N C SING N N 41 SQB C9 H1 SING N N 42 SQB C2 H2 SING N N 43 SQB C5 H3 SING N N 44 SQB N H4 SING N N 45 SQB C H5 SING N N 46 SQB C H6 SING N N 47 SQB C H7 SING N N 48 SQB C13 H8 SING N N 49 SQB C13 H9 SING N N 50 SQB C13 H10 SING N N 51 SQB C14 H11 SING N N 52 SQB C15 H12 SING N N 53 SQB C17 H13 SING N N 54 SQB C17 H14 SING N N 55 SQB C17 H15 SING N N 56 SQB C18 H16 SING N N 57 SQB C19 H17 SING N N 58 SQB C21 H18 SING N N 59 SQB C21 H19 SING N N 60 SQB C22 H20 SING N N 61 SQB C23 H21 SING N N 62 SQB C23 H22 SING N N 63 SQB C24 H23 SING N N 64 SQB C25 H24 SING N N 65 SQB C25 H25 SING N N 66 SQB N5 H26 SING N N 67 SQB N5 H27 SING N N 68 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor SQB InChI InChI 1.03 "InChI=1S/C26H27ClN6O4/c1-14-4-7-21(35-3)23(31-14)15-5-6-18(20(27)9-15)19-8-16-10-30-26(29-2)32-24(16)33(25(19)34)11-22-36-12-17(28)13-37-22/h4-10,17,22H,11-13,28H2,1-3H3,(H,29,30,32)/t17-,22-" SQB InChIKey InChI 1.03 SPYPSRDGJWPJCB-VVOJOOEHSA-N SQB SMILES_CANONICAL CACTVS 3.385 "CNc1ncc2C=C(C(=O)N(C[C@@H]3OC[C@@H](N)CO3)c2n1)c4ccc(cc4Cl)c5nc(C)ccc5OC" SQB SMILES CACTVS 3.385 "CNc1ncc2C=C(C(=O)N(C[CH]3OC[CH](N)CO3)c2n1)c4ccc(cc4Cl)c5nc(C)ccc5OC" SQB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CC5OCC(CO5)N)NC)OC" SQB SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(n1)c2ccc(c(c2)Cl)C3=Cc4cnc(nc4N(C3=O)CC5OCC(CO5)N)NC)OC" # _pdbx_chem_comp_identifier.comp_id SQB _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "8-[(5-azanyl-1,3-dioxan-2-yl)methyl]-6-[2-chloranyl-4-(3-methoxy-6-methyl-pyridin-2-yl)phenyl]-2-(methylamino)pyrido[2,3-d]pyrimidin-7-one" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site SQB "Create component" 2020-11-30 PDBE SQB "Initial release" 2020-12-16 RCSB ##